OMA group 1082903 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1082903 with 72 members.

Fingerprint: QPMVYNA | domain-containing protein

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Members 72

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Thecamonas trahens ATCC 50062	THETB08045	A0A0L0DK81
E	Porphyridium purpureum	PORPP03808	A0A5J4YT85
E	Chondrus crispus	CHOCR08769	R7Q4N7
E	Hyaloperonospora arabidopsidis (strain Emoy2)	HYAAE12135	M4B549
E	Phytophthora infestans (strain T30-4)	PHYIT01204	D0MVB6
E	Phytophthora nicotianae	PHYNI16269	AM587_10001130
E	Phytophthora parasitica	PHYPR13804	W2IZA3
E	Phytophthora parasitica (strain INRA-310)	PHYPN16479	W2IZA3
E	Phytophthora ramorum	PHYRM03934	H3GJU1
E	Plasmopara halstedii	PLAHL09395	A0A0P1A9Y5
E	Zostera marina	ZOSMR05009	A0A0K9PYU2
E	Asparagus officinalis	ASPOF02174	A0A5P1FL14
E	Oryza brachyantha	ORYBR10989	J3LCW6
E	Oryza glaberrima	ORYGL10317	ORGLA02G0146500
E	Oryza longistaminata	ORYLO15584	KN539487.1_FG006
E	Oryza nivara	ORYNI13826	A0A0E0G6L2
E	Oryza punctata	ORYPU11696	A0A0E0JZU7
E	Oryza rufipogon	ORYRU14080	A0A0E0NEX7
E	Oryza sativa subsp. indica	ORYSI13453	B8AHX0
E	Oryza sativa subsp. japonica	ORYSJ12420	Q0E174
E	Brachypodium distachyon	BRADI05442	BRADI1G56090
E	Hordeum vulgare subsp. vulgare	HORVV139017	HORVU6Hr1G003890
E	Aegilops tauschii subsp. strangulata	AEGTS41783	A0A453MRS3
E	Triticum aestivum	WHEAT98273	A0A3B6NJ65
E	Triticum turgidum subsp. durum	TRITD65049	TRITD0Uv1G052440

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