OMA group 1080861 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1080861 with 35 members.

Fingerprint: PGEHVPY | Derived by automated computational analysis using gene prediction method Gnomon

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Members 35

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
B	Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)	SACEN07021	WP_009944453
B	Streptomyces clavuligerus	STRCL01212	EFG04707
B	Streptomyces tsukubensis (strain DSM 42081 / NBRC 108919 / NRRL 18488 / 9993)	STRT904766	EIF93834
E	Drosophila busckii	DROBS07880	A0A0M4F3I1
E	Drosophila grimshawi	DROGR07401	B4JUM6
E	Drosophila ananassae	DROAN12480	B3LZM6
E	Drosophila erecta	DROER03663	B3P1F2
E	Drosophila melanogaster	DROME19894	Q9VGC0
E	Drosophila sechellia	DROSE14895	B4HHG0
E	Drosophila simulans	DROSI10073	B4QSZ9
E	Drosophila yakuba	DROYA09824	B4PNP1
E	Drosophila rhopaloa	DRORH08384	DRHO008396
E	Drosophila suzukii	DROSZ19744	LOC108019281
E	Drosophila guanche	DROGU11801	A0A3B0KH75
E	Drosophila obscura	DROOB07428	LOC111068354
E	Drosophila miranda	DROMI08206	XP_017139471
E	Drosophila persimilis	DROPE12523	B4GFS9
E	Drosophila pseudoobscura pseudoobscura	DROPS15086	FBgn0247711
E	Drosophila willistoni	DROWI14127	FBgn0213574
E	Drosophila hydei	DROHY03800	A0A6J1MN42
E	Drosophila arizonae	DROAR03017	XP_017873569
E	Drosophila mojavensis	DROMO13462	B4KDX6
E	Drosophila navojoa	DRONA09401	A0A484B8K2
E	Drosophila novamexicana	DRONM10071	XP_030562515
E	Drosophila virilis	DROVI13513	B4M5B4

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