OMA group 1079384 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1079384 with 135 members.

Fingerprint: TKQHNWI | protein tyrosine phosphatase non-receptor type

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Members 135

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Chiloscyllium punctatum	CHIPU07539	A0A401SFJ0
E	Lepisosteus oculatus	LEPOC10444	W5M0A1
E	Anguilla anguilla	ANGAN20821	XP_035272766
E	Anabas testudineus	ANATE21898	A0A3Q1IZE7
E	Seriola dumerili	SERDU10901	A0A3B4V9X5
E	Echeneis naucrates	ECHNA53182	A0A665UFE6
E	Cynoglossus semilaevis	CYNSE25895	A0A3P8VKY6
E	Scophthalmus maximus	SCOMX01165	ENSSMAG00000009506.1
E	Dicentrarchus labrax	DICLA41299	A0A8P4FZ37
E	Gasterosteus aculeatus	GASAC15665	G3PAK1
E	Sparus aurata	SPAAU44768	A0A671X8U2
E	Mola mola	MOLML18550	A0A3Q3X1R1
E	Takifugu rubripes	TAKRU51424	A0A674NQ73
E	Oryzias melastigma	ORYME03100	A0A3B3CV15
E	Nothobranchius furzeri	NOTFU21359	A0A1A8A1N2
E	Kryptolebias marmoratus	KRYMA12452	A0A3Q2ZG48
E	Cyprinodon variegatus	CYPVA13090	A0A3Q2CAQ2
E	Gambusia affinis	GAMAF17248	ENSGAFG00000021834.1
E	Poecilia formosa	POEFO15965	A0A087Y6T6
E	Poecilia reticulata	POERE28607	A0A3P9Q6I9
E	Xiphophorus maculatus	XIPMA24276	A0A3B5Q448
E	Salarias fasciatus	SALFA28117	A0A672GQD1
E	Haplochromis burtoni	HAPBU29051	A0A3Q2WJ30
E	Oreochromis aureus	OREAU49948	A0A668VYE7
E	Oreochromis niloticus	ORENI69454	I3JWH8

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