OMA group 1077448 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1077448 with 71 members.

Fingerprint: THCFKHL | Derived by automated computational analysis using gene prediction method Gnomon

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Members 71

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
B	candidate division LCP-89 bacterium B3_LCP	UC10900394	CEE37_14605
B	Acidobacteria bacterium s2_autometa_2-0	UC10103560	GKS06_17675
B	Luteitalea pratensis	LUTPR04386	dnaJ_3
E	Entamoeba dispar (strain ATCC PRA-260 / SAW760)	ENTDS02917	B0EBW2
E	Entamoeba histolytica	ENTHI00440	A0A5K1V6C2
E	Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)	ENTH100917	A0A5K1V6C2
E	Entamoeba invadens IP1	ENTIV02177	S0B7Y2
E	Entamoeba nuttalli (strain P19)	ENTNP03494	K2G7B5
E	Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691)	SCHCR00986	S9W625
E	Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)	SCLS110269	A7EDG0
E	Candida albicans (strain SC5314 / ATCC MYA-2876)	CANAL02992	Q5A4Z2
E	Candida albicans (strain WO-1)	CANAW04580	C4YQT3
E	Candida maltosa (strain Xu316)	CANMX00633	M3J318
E	Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)	LODEL03687	A5E264
E	Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)	PICGU02189	A5DFY8
E	Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)	PICST05351	A3LZF6
E	Candida tenuis	CANTE02802	fgenesh2_pm.00018_#_
E	Clavispora lusitaniae (strain ATCC 42720)	CLAL403785	C4Y5G9
E	Candida auris	CANAR03348	A0A2H1A1K3
E	Cyberlindnera fabianii	CYBFA03367	A0A1V2L4G5
E	Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542)	CYBJN01955	A0A1E4S6A8
E	Komagataella phaffii (strain GS115 / ATCC 20864)	KOMPG03002	C4R4P3
E	Dekkera bruxellensis	DEKBR01951	e_gw1.2.461.1
E	Ogataea parapolymorpha (strain ATCC 26012 / BCRC 20466 / JCM 22074 / NRRL Y-7560 / DL-1)	OGAPD00745	W1Q8Y6
E	Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL Y-17582)	ERECY00924	G8JTL6

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