OMA group 1075345 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1075345 with 87 members.

Fingerprint: KNMQTAF | calcium homeostasis endoplasmic reticulum protein

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Members 87

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Eimeria maxima	EIMMA03111	U6LZB1
E	Hammondia hammondi	HAMHA05957	KEP60910
E	Neospora caninum (strain Liverpool)	NEOCL00449	F0V8B0
E	Toxoplasma gondii	TOXGO00511	CAJ20703
E	Toxoplasma gondii (strain ATCC 50861 / VEG)	TOXGV06826	V4ZB18
E	Vitrella brassicaformis (strain CCMP3155)	VITBC04141	A0A0G4GAI3
E	Klebsormidium flaccidum	KLEFL07149	KFL_001920180
E	Klebsormidium nitens	KLENI09182	A0A1Y1I716
E	Physcomitrium patens	PHYPA17451	A0A2K1J3V9
E	Marchantia polymorpha	MARPO18078	A0A2R6WTR0
E	Ceratopteris richardii	CERRI48206	A0A8T2RT03
E	Marsilea vestita	MARVE18862	Mvestita_S6g00410.1
E	Welwitschia mirabilis	WELMI14094	W.mirabilis.16415
E	Pinus taeda	PINTA03827	PTA00069226
E	Taxus chinensis	TAXCH20881	A0AA38G8V0
E	Amborella trichopoda	AMBTC07870	W1P2H7
E	Zostera marina	ZOSMR21621	A0A0K9NP05
E	Oryza brachyantha	ORYBR24304	J3MGY2
E	Oryza longistaminata	ORYLO16061	KN539439.1_FG012
E	Oryza nivara	ORYNI29713	A0A0E0HUL4
E	Oryza punctata	ORYPU25348	A0A0E0LES7
E	Oryza rufipogon	ORYRU30131	A0A0E0Q1Q8
E	Oryza sativa subsp. indica	ORYSI29589	A2YGA4
E	Oryza sativa subsp. japonica	ORYSJ26985	A0A0P0X0F2
E	Brachypodium distachyon	BRADI03346	BRADI1G32970

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