OMA group 1053436 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1053436 with 139 members.

Fingerprint: KHKNFTC | fez family zinc finger

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Members 139

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Scyliorhinus torazame	SCYTO03655	A0A401PN80
E	Chiloscyllium punctatum	CHIPU00295	A0A401RUU1
E	Callorhinchus milii	CALMI18603	A0A4W3HMZ8
E	Lepisosteus oculatus	LEPOC13824	W5MWK9
E	Anguilla anguilla	ANGAN45352	XP_035243471
E	Anabas testudineus	ANATE35116	A0A3Q1GZK5
E	Seriola dumerili	SERDU07017	A0A3B4TZ38
E	Echeneis naucrates	ECHNA04543	A0A665VAB9
E	Cynoglossus semilaevis	CYNSE04023	A0A3P8WKX0
E	Scophthalmus maximus	SCOMX28381	A0A8D2ZPC1
E	Dicentrarchus labrax	DICLA21682	A0A8C4EPU6
E	Gasterosteus aculeatus	GASAC04404	G3PCQ7
E	Sparus aurata	SPAAU41286	A0A671WYP1
E	Mola mola	MOLML02219	A0A3Q3WT27
E	Takifugu rubripes	TAKRU20004	H2RL93
E	Tetraodon nigroviridis	TETNG15290	H3D9S6
E	Oryzias javanicus	ORYJA03814	A0A3S2UK91
E	Oryzias latipes	ORYLA14158	ENSORLG00000010156
E	Oryzias melastigma	ORYME01121	A0A3B3B505
E	Nothobranchius furzeri	NOTFU31661	A0A1A8V7A2
E	Kryptolebias marmoratus	KRYMA24173	A0A3Q3A0U2
E	Cyprinodon variegatus	CYPVA31591	A0A3Q2EEU0
E	Gambusia affinis	GAMAF00366	ENSGAFG00000007475.1
E	Poecilia formosa	POEFO23366	A0A087X2N1
E	Poecilia reticulata	POERE27769	A0A3P9Q7P9

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