OMA group 1048178 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1048178 with 29 members.

Fingerprint: PHTHLMP | Derived by automated computational analysis using gene prediction method Gnomon

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Members 29

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Salmo salar	SALSA18039	ENSSSAG00000025312.2
E	Salmo trutta	SALTR81240	A0A674F1R1
E	Drosophila busckii	DROBS01869	A0A0M4E668
E	Drosophila grimshawi	DROGR11372	B4JQX3
E	Drosophila bipectinata	DROBP04107	DBIP004108
E	Drosophila elegans	DROEL10370	DELE010374
E	Drosophila eugracilis	DROEU09198	DEUG009202
E	Drosophila ficusphila	DROFC09351	DFIC009365
E	Drosophila erecta	DROER08632	B3NNL4
E	Drosophila melanogaster	DROME00499	Q9VJH6
E	Drosophila sechellia	DROSE06020	B4I556
E	Drosophila simulans	DROSI02102	B4Q7G9
E	Drosophila yakuba	DROYA03141	B4P994
E	Drosophila kikkawai	DROKI00454	A0A6P4ISE9
E	Drosophila rhopaloa	DRORH05559	A0A6P4FHQ5
E	Drosophila suzukii	DROSZ00876	XP_016942843
E	Drosophila takahashii	DROTK03805	DTAK003817
E	Drosophila guanche	DROGU09615	A0A3B0JJ49
E	Drosophila obscura	DROOB19226	LOC111077940
E	Drosophila miranda	DROMI18750	XP_017151865
E	Drosophila persimilis	DROPE14582	B4G8P6
E	Drosophila pseudoobscura pseudoobscura	DROPS05857	FBgn0072211
E	Drosophila willistoni	DROWI08872	FBgn0220237
E	Drosophila hydei	DROHY11536	A0A6J1M0X6
E	Drosophila arizonae	DROAR05138	XP_017856678

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