OMA group 1025788 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1025788 with 108 members.

Fingerprint: KYSLHMA | dynein light chain Tctex-type

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Members 108

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Lepisosteus oculatus	LEPOC03669	W5NNI8
E	Esox lucius	ESOLU12838	A0A3P8XXL5
E	Salmo salar	SALSA61409	A0A1S3NFZ4
E	Salmo trutta	SALTR01057	A0A673Y674
E	Latimeria chalumnae	LATCH07078	M3XID6
E	Ornithorhynchus anatinus	ORNAN14260	A0A6I8PML0
E	Tachyglossus aculeatus	TACAU02078	XP_038627084
E	Echinops telfairi	ECHTE08718	ENSETEG00000019671
E	Ochotona princeps	OCHPR07243	ENSOPRG00000015302
E	Dipodomys ordii	DIPOR16347	ENSDORG00000014079.2
E	Fukomys damarensis	FUKDA11860	ENSFDAG00000007355.1
E	Heterocephalus glaber	HETGA13606	G5C7R4
E	Cavia aperea	CAVAP13214	ENSCAPG00000006938.1
E	Cavia porcellus	CAVPO18057	A0A286XQ09
E	Octodon degus	OCTDE05218	A0A6P6E6X2
E	Jaculus jaculus	JACJA02045	A0A8C5L794
E	Cricetulus griseus	CRIGR13881	A0A8C2N2L8
E	Mus musculus	MOUSE21638	A0A0R4J284
E	Rattus norvegicus	RATNO16860	A0A0G2K5Q6
E	Nannospalax galili	NANGA18953	A0A8C6W1K2
E	Ictidomys tridecemlineatus	ICTTR18481	I3MH07
E	Cercocebus atys	CERAT39874	A0A2K5L6V4
E	Chlorocebus sabaeus	CHLSB03930	A0A0D9RHG4
E	Macaca fascicularis	MACFA30836	A0A8J8Y388
E	Macaca mulatta	MACMU34146	F6SPP8

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