OMA group 1025358 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1025358 with 33 members.

Fingerprint: ATIYAIW | phosphate transporter

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Members 33

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Aspergillus parasiticus	ASPPA01041	A0A5N6E3S3
E	Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167)	ASPFN10461	A0A7G5JYV8
E	Aspergillus oryzae (strain ATCC 42149 / RIB 40)	ASPOR03915	Q2UJ07
E	Aspergillus calidoustus	ASPCI08700	A0A0U5GUJ1
E	Penicillium italicum	PENIT06368	A0A0A2KGM0
E	Penicillium roqueforti (strain FM164)	PENRF04401	A0AAD4NR85
E	Colletotrichum gloeosporioides (strain Cg-14)	COLGC09070	T0LX38
E	Colletotrichum graminicola	COLGR02449	EFQ34466
E	Verticillium dahliae	VERDA08578	VDAG_03342T0
E	Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137)	VERDV03342	G2WZA0
E	Pseudallescheria apiosperma	PSEDA03179	A0A084GCB1
E	Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)	CHATD06119	G0S328
E	Lachancea fermentati	LACFM01739	A0A1G4MGW9
E	Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284)	LACTC00831	C5DH03
E	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)	YEAST00344	PHO89_YEAST
E	Saccharomyces cerevisiae (strain AWRI796)	YEASA01332	AWRI796_0430
E	Thanatephorus cucumeris (strain AG1-IA)	THACA03085	L8X2L1
E	Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951)	TILAU06378	A0A066V572
E	Syncephalastrum racemosum	SYNRA04240	A0A1X2HIS6
E	Asterias rubens	ASTRU16334	XP_033640885
E	Acanthaster planci	ACAPL05890	A0A8B7XSX0
E	Patiria miniata	PATMI07563	A0A913ZKF3
E	Strongylocentrotus purpuratus	STRPU15450	A0A7M7STQ7
E	Lytechinus variegatus	LYTVA01683	XP_041465185
E	Strongyloides ratti	STRRB02482	A0A090N0H3

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