OMA group 1005811 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1005811 with 14 members.

Fingerprint: CCNDNEN | Scarecrow-like protein

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Members 14

Filter by Taxonomy:
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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Ceratopteris richardii	CERRI29552	A0A8T2TA67
E	Medicago truncatula	MEDTR39288	G7JUT4
E	Lotus japonicus	LOTJA04038	Lj0g3v0130909
E	Glycine max	SOYBN05839	A0A0R0HMZ5
E	Quercus lobata	QUELO20845	A0A7N2KPE6
E	Populus trichocarpa	POPTR50403	Potri.009G032800.2.v
E	Rosa chinensis	ROSCH31755	A0A2P6QJ02
E	Brassica napus	BRANA60975	A0A078HM60
E	Brassica oleracea var. oleracea	BRAOL21294	A0A0D3BTY3
E	Arabidopsis thaliana	ARATH14052	SCL34_ARATH
E	Eutrema salsugineum	EUTSA19289	V4NWZ8
E	Gossypium arboreum	GOSAR13529	XP_017633532
E	Gossypium hirsutum	GOSHI13297	A0A1U8MQ35
E	Eucalyptus grandis	EUCGR16528	A0A059D5R3

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