Similar HOG based on domains to

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E0792972.4a.6f.11b.13a with 1 members (ectonucleoside triphosphate diphosphohydrolase)

Opisthokonta / Metazoa / Eumetazoa / Bilateria / Deuterostomia / Chordata / Vertebrata /

... /

Gnathostomata / Euteleostomi / Sarcopterygii / Tetrapoda / Amniota / Mammalia / Theria / Eutheria /

Xenarthra

Completeness score: 0.50

‹

Representative domain architecture:

Prevalence of repr. domain architecture within HOG:

95.0%

This HOG has 856 similar HOGs:

HOG ID	Deepest level	HOG size	Representative Domain Architecture	Prevalence	Similarity
HOG:E0991049	Bacteria	2006		47.6%	2
HOG:E0802647	Eukaryota	594		92.1%	2
HOG:E0477479	Ascomycota	161		98.8%	2
HOG:E0484559	Fungi	131		88.5%	2
HOG:E0314036	Embryophyta	126		100.0%	2
HOG:E1028639	LUCA	77		94.8%	2
HOG:E0303025	Spermatophyta	42		95.2%	2
HOG:E0143394	Alveolata	38		94.7%	2
HOG:E0396352	Basidiomycota	37		100.0%	2
HOG:E0464741	sordariomyceta	37		100.0%	2
HOG:E0852616	p__Myxococcota	32		59.4%	2
HOG:E0296474	Magnoliopsida	24		91.7%	2
HOG:E0020010	Archaea	23		100.0%	2
HOG:E0821635	Eukaryota	20		65.0%	2
HOG:E0711566	Archelosauria	19		94.7%	2
HOG:E1002746	Bacteria	17		100.0%	2
HOG:E0794967	Opisthokonta	16		93.8%	2
HOG:E0406122	Saccharomycetales	15		86.7%	2
HOG:E1024823	Bacteria	14		78.6%	2
HOG:E0141224	Apicomplexa	13		84.6%	2
HOG:E1034558	LUCA	13		92.3%	2
HOG:E0064858	Trypanosomatidae	12		50.0%	2
HOG:E0813283	Eukaryota	11		72.7%	2
HOG:E0307168	Spermatophyta	10		100.0%	2
HOG:E0763215	Bilateria	10		70.0%	2

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