Similar HOG based on domains to

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E0789666.1b.1c.3a with 18 members (transcription factor CP2)

Metazoa / Eumetazoa / Bilateria / Protostomia / Ecdysozoa / Panarthropoda /

Completeness score: 0.14

‹

Representative domain architecture:

Prevalence of repr. domain architecture within HOG:

86.9%

This HOG has 671 similar HOGs:

HOG ID	Deepest level	HOG size	Representative Domain Architecture	Prevalence	Similarity
HOG:E0789610	Metazoa	2453		78.9%	1
HOG:E0789447	Metazoa	767		92.4%	1
HOG:E0790030	Metazoa	500		44.6%	1
HOG:E0790058	Metazoa	492		97.2%	1
HOG:E0789193	Metazoa	473		89.0%	1
HOG:E0784395	Eumetazoa	461		58.6%	1
HOG:E0780257	Eumetazoa	437		64.1%	1
HOG:E0789504	Metazoa	416		47.1%	1
HOG:E0772659	Bilateria	397		44.3%	1
HOG:E0763043	Bilateria	395		86.8%	1
HOG:E0793245	Opisthokonta	386		92.5%	1
HOG:E0790117	Metazoa	384		94.8%	1
HOG:E0790063	Metazoa	358		78.2%	1
HOG:E0761368	Bilateria	346		93.6%	1
HOG:E0783245	Eumetazoa	337		91.7%	1
HOG:E0759275	Deuterostomia	319		93.4%	1
HOG:E0754157	Vertebrata	318		99.4%	1
HOG:E0778321	Eumetazoa	310		97.4%	1
HOG:E0761780	Bilateria	308		97.1%	1
HOG:E0790244	Metazoa	297		44.4%	1
HOG:E0783333	Eumetazoa	287		74.6%	1
HOG:E0761082	Bilateria	283		96.5%	1
HOG:E0779863	Eumetazoa	279		72.8%	1
HOG:E0756962	Chordata	262		60.7%	1
HOG:E0789484	Metazoa	261		81.6%	1

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