OMA: MSA of HOG:E0759331.1b.3b at Clupeocephala

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E0759331.1b.3b with 47 members (ST3 beta-galactoside alpha-2,3-sialyltransferase)

Deuterostomia / Chordata / Vertebrata / Gnathostomata / Euteleostomi / Neopterygii / Teleostei / Clupeocephala /

Completeness score: 1.00

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Label

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ANATE27251

SERDU14259

ECHNA32946

CYNSE18368

SCOMX29381

DICLA00806

GASAC09110

SPAAU37971

MOLML19718

TAKRU34019

TETNG05252

ORYJA27053

ORYLA06570

ORYME26073

NOTFU31121

KRYMA20686

CYPVA31405

GAMAF27408

POEFO15401

POERE11792

XIPMA30930

SALFA34734

ASTCA16532

HAPBU22363

NEOBR06770

OREAU29462

ORENI28109

AMPCI07651

AMPOC22070

AMPPE01171

HIPCM15951

GADMO56669

ESOLU07382

SALSA34909

SALSA59632

SALSA114904

SALTR41897

SALTR62796

ASTMX10322

PYGNA28239

ELEEL00758

ICTPU15793

CYPCA42341

CYPCA71497

SINGR73136

SINGR80094

DANRE28303