Related genomes of genome MORCR based on shared OMA groups

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

MORCR - Moraxella catarrhalis (strain RH4)

Proteome version: 30-SEP-2012 (Rel. 114, Last updated, Version 4) with 1881 proteins.

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Genome information
List genes
Related Species

Based on number of:

Shared OMA groups

Shared HOGs
Gene Order
Synteny

Species with most common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	MORCB	Moraxella catarrhalis (strain BBH18)	1649
2	MORNO	Moraxella nonliquefaciens	1033
3	PSYCK	Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)	1007
4	PSYWF	Psychrobacter sp. (strain PRwf-1)	981
5	PSYA2	Psychrobacter arcticus (strain DSM 17307 / VKM B-2377 / 273-4)	964
6	ACIBC	Acinetobacter baumannii (strain ACICU)	902
7	ACIBY	Acinetobacter baumannii (strain AYE)	899
8	ACIBD	Acinetobacter baumannii (strain TCDC-AB0715)	898
9	ACISD	Acinetobacter oleivorans (strain JCM 16667 / KCTC 23045 / DR1)	893
10	ACIB1	Acinetobacter baumannii (strain 1656-2)	891

Species with least common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	VITCO	Vittaforma corneae (strain ATCC 50505)	15
2	ENTBH	Enterocytozoon bieneusi (strain H348)	16
3	EDHAE	Edhazardia aedis (strain USNM 41457)	16
4	NOSCE	Nosema ceranae (strain BRL01)	22
5	TRAHO	Trachipleistophora hominis	22
6	NEMP3	Nematocida parisii (strain ERTm3)	23
7	TRYCI	Trypanosoma congolense (strain IL3000)	24
8	ENCCU	Encephalitozoon cuniculi (strain GB-M1)	24
9	NANEQ	Nanoarchaeum equitans (strain Kin4-M)	24
10	UC149	Candidatus Huberarchaeum crystalense CG_4_9_14_0_8_um_filter_31_21	25