Related genomes of genome EHRRW based on shared OMA groups

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

EHRRW - Ehrlichia ruminantium (strain Welgevonden)

Proteome version: 13-MAY-2009 (Rel. 100, Last updated, Version 6) with 1043 proteins.

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Genome information
List genes
Related Species

Based on number of:

Shared OMA groups

Shared HOGs
Gene Order
Synteny

Species with most common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	EHRRG	Ehrlichia ruminantium (strain Gardel)	901
2	EHRCJ	Ehrlichia canis (strain Jake)	722
3	EHRCR	Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)	703
4	ANAMF	Anaplasma marginale (strain Florida)	589
5	ANAMM	Anaplasma marginale (strain St. Maries)	581
6	ANAPZ	Anaplasma phagocytophilum (strain HZ)	557
7	WOLPP	Wolbachia pipientis subsp. Culex pipiens (strain wPip)	539
8	WOLWR	Wolbachia sp. subsp. Drosophila simulans (strain wRi)	536
9	WOLPM	Wolbachia pipientis wMel	532
10	WOLTR	Wolbachia sp. subsp. Brugia malayi (strain TRS)	491

Species with least common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	RALSL	Ralstonia solanacearum	9
2	ENTBH	Enterocytozoon bieneusi (strain H348)	9
3	TRYCI	Trypanosoma congolense (strain IL3000)	11
4	VITCO	Vittaforma corneae (strain ATCC 50505)	13
5	EDHAE	Edhazardia aedis (strain USNM 41457)	17
6	MONPE	Moniliophthora perniciosa (strain FA553 / isolate CP02)	19
7	TRAHO	Trachipleistophora hominis	19
8	NEMP3	Nematocida parisii (strain ERTm3)	20
9	SYMMI	Symbiodinium microadriaticum	21
10	NOSCE	Nosema ceranae (strain BRL01)	21