Information of genome Acari

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Ancestral genome of Acari

with 13 descendant species and 27961 ancestral genes (HOGs).

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Common name:	Acari
NCBI taxonomic identifier:	6933
Number of ancestral genes:	27961
Number of descendant extant species:	13

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Code	Scientific Name	Common Name	Last Update	# of Sequences	Taxon Id	D.
IXOSC	Ixodes scapularis	Black-legged tick	2024-Feb-04	34235	6945	E
IXOPE	Ixodes persulcatus	Taiga tick	2024-Feb-27	28396	34615	E
HAELO	Haemaphysalis longicornis	Bush tick	2024-Feb-28	25651	44386	E
DERAN	Dermacentor andersoni	Rocky mountain wood tick	2024-Feb-27	36216	34620	E
DERSI	Dermacentor silvarum	Tick	2024-Feb-27	36397	543639	E
RHIMP	Rhipicephalus microplus	Cattle tick	2024-Feb-27	24211	6941	E
RHISA	Rhipicephalus sanguineus	Brown dog tick	2024-Feb-27	30609	34632	E
VARDE	Varroa destructor	Honeybee mite	2022-Jan-23	20206	109461	E
BLOTA	Blomia tropicalis	Mite	2024-Feb-28	10651	40697	E
DERPT	Dermatophagoides pteronyssinus	European house dust mite	2024-Feb-27	12837	6956	E
SARSC	Sarcoptes scabiei	Itch mite	2024-Feb-04	9318	52283	E
TETUR	Tetranychus urticae	Two-spotted spider mite	2024-Feb-04	15684	32264	E
PANCT	Panonychus citri	Citrus red mite	2024-Feb-27	14862	50023	E

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