Entry VIBCH02472 (Q9KP49)

B Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)


General Information

Description
RNA polymerase sigma-54 factor
Organism
VIBCH - Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (Taxon-ID: 243277)
Locus
Chromosome 12711910..2713373
Number of exons
1

IDs and Cross-references

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Domain Architecture

Gene Ontology

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Protein Sequence

Download: Fasta
MKPSLQLKLG QQLAMTPQLQ QAIRLLQLST LDLQQEIQEA LESNPLLEVE ENQDEAPSLD    60
SVRMTEESPR EPEELYEPEP QDSSDLIEKS EISAELEMDT TWDEVYSANT GSTGLALDDD   120
APIYQGETTQ TLQDYLHWQL DLTPFSDVDR TIAVALIDAI DDYGYLTVSL EEIQESLRSD   180
DIELDEIEAV RKRIQQFDPF GVASLNLQDC LLLQLTTYPC DTPWLEEARL LLSQYIDDLG   240
NRDYKTILKE TKLKEEDLRE ILQLIQQLDP RPGSRIAQDH AEYVIPDVSV YKEQGRWLVT   300
INPDSVPKLK INQQYADLMR GNNAESNYIR TNLQEAKWLI KSLESRNETL LKVAKCIVEH   360
QHDFFEYGEE AMKPMVLNDV AMAVEMHEST ISRVTTQKYM HTPRGIFELK YFFSSHVSTD   420
NGGECSSTAI RALIKKLVAA ENPAKPLSDS KIATLLADQG IQVARRTIAK YRESLGIAPS   480
SQRKRLL                                                             487

Coding Sequence

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ATGAAACCGT CATTACAGCT CAAGCTAGGT CAACAGTTAG CCATGACTCC GCAGCTCCAG    60
CAGGCGATTC GTCTGTTGCA GCTTTCGACG CTGGATCTGC AGCAAGAAAT TCAGGAAGCA   120
TTGGAATCTA ACCCCTTGTT AGAGGTGGAA GAGAACCAAG ACGAAGCGCC ATCGCTTGAT   180
AGCGTACGTA TGACGGAAGA AAGCCCGCGC GAGCCAGAAG AACTCTACGA ACCTGAACCG   240
CAGGATAGCT CGGATCTGAT TGAAAAATCG GAAATCAGCG CTGAATTAGA GATGGATACC   300
ACTTGGGATG AAGTCTACAG CGCCAATACT GGCAGTACAG GACTGGCACT CGATGATGAT   360
GCCCCTATCT ACCAAGGCGA AACCACCCAA ACCCTGCAAG ATTATCTTCA CTGGCAACTC   420
GACTTAACTC CCTTTAGCGA TGTGGATCGC ACTATAGCCG TCGCACTTAT CGATGCTATC   480
GACGATTACG GTTATTTAAC CGTCTCACTA GAGGAGATCC AAGAGAGCCT GCGCAGTGAT   540
GACATTGAGT TGGATGAGAT TGAAGCGGTA CGTAAACGCA TTCAGCAGTT TGACCCCTTT   600
GGTGTGGCAT CGCTTAATCT GCAAGACTGC TTGTTGCTGC AACTCACCAC CTATCCCTGT   660
GATACTCCTT GGCTGGAAGA AGCGCGTTTA CTGCTCTCAC AGTACATCGA TGATTTAGGG   720
AATCGCGATT ACAAAACCAT TCTGAAAGAG ACTAAGCTCA AAGAAGAGGA CTTGCGCGAG   780
ATCCTGCAAC TCATCCAACA GCTCGATCCT CGCCCCGGCA GTCGAATTGC CCAAGATCAC   840
GCTGAATACG TCATACCTGA CGTGTCAGTC TATAAAGAAC AAGGTCGATG GCTGGTCACC   900
ATCAACCCAG ATAGTGTGCC TAAACTGAAG ATCAATCAGC AGTATGCCGA CCTGATGCGC   960
GGTAATAATG CGGAGAGCAA CTACATCCGT ACCAATTTGC AAGAGGCAAA ATGGCTGATC  1020
AAAAGTTTAG AAAGTAGAAA CGAGACACTG CTCAAAGTTG CCAAGTGCAT AGTTGAACAC  1080
CAACACGATT TCTTCGAGTA TGGAGAAGAG GCGATGAAGC CGATGGTGCT CAACGATGTG  1140
GCGATGGCGG TGGAAATGCA TGAATCGACA ATTTCGCGTG TCACCACGCA GAAATACATG  1200
CATACCCCGC GCGGCATTTT TGAGTTGAAG TACTTTTTCT CCAGCCACGT CAGTACTGAC  1260
AATGGCGGAG AGTGCTCGTC CACTGCGATC AGGGCGCTGA TCAAAAAACT GGTGGCGGCA  1320
GAGAATCCTG CCAAACCACT CAGTGACAGC AAGATCGCAA CCCTACTCGC TGACCAAGGC  1380
ATCCAAGTCG CGCGGCGAAC CATCGCCAAA TACCGTGAAT CACTTGGCAT CGCCCCATCA  1440
AGTCAGCGCA AACGCCTGCT ATAG                                         1464