Entry NOCDD04216 (D7AW09)

B Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / CIP 107115 / JCM 7437 / KCTC 9190 / NBRC 14626 / NCTC 10488 / NRRL B-5397 / IMRU 509)


General Information

Description
choline/carnitine/betaine transporter COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060:IPR018093; KEGG: svi:Svir_23270 choline/carnitine/betaine transport; PFAM: BCCT transporter; SPTR: C1YGY1 Choline/carnitine/betaine transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
Organism
NOCDD - Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / CIP 107115 / JCM 7437 / KCTC 9190 / NBRC 14626 / NCTC 10488 / NRRL B-5397 / IMRU 509) (Taxon-ID: 446468)
Locus
complement(5095450..5097612)
Number of exons
1

IDs and Cross-references

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Domain Architecture

Gene Ontology

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Protein Sequence

Download: Fasta
MATDGGQHRP DREPEPEAEP EPETGPETPE EAERGPSRLK PVVFYGSSAL IVALSVWAIV    60
APTHAGNTIG AVVTWITEVF GWYYFLATTL YLGFVVVIAL SRYGRVKLGP QHSKPDYGVF   120
AWAAMLFAAG IGIDLLFFSV SGPVSHYLAP PEGDAQTVEA ARQAVVWTLF HYGVTGWAMY   180
ALMGMALGYF SFRYHLPLAI RSALYPLIGR RIHGPVGDAV DLAAVIGTIF GISVSLGIGV   240
VQLNYGLNFL FGVPEGVAAQ LGLIIVAVLV ATMSAVAGVD RGIRRLSEIN VVLAVVLMLY   300
VLVFEDPLYL LNALVLNIGD YLSRFPSMTL NTFAYDPPTD WLNAWTLFFW AWWIAWAPFV   360
GMFLARISRG RTIRQFVAAT LVVPLLFTLT FLSFFGNSAL SVVREGGAAF GQTTMNHPEQ   420
GFYALLAQYP GVLFSAGLAT VVGLLFYVTS ADSGALVMGN LSSHLPTPLT DASPWLRVFW   480
SAATGLLTLA MLLVGGVDTL TSATIIMGLP FSFVMFVIMW GLFKALRIEK FRKDAFRTTL   540
SSSLSDRTAA DRRGPERNWR QRIKRAVSFP GRRAAERFVR DVCRPAFRDV AEELREHGAE   600
ASVSEGVDEA VGIAYLELRA PMGEEEEFSY RVWPMEVPTP AFAMRSLAEH DTYVRFEVYL   660
TEGSQGYDVM GYTKEQLIGN ILDEYERHLE FLRLHREATS GSALPDHGPG TADVQDTEER   720

Coding Sequence

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GTGGCCACCG ACGGAGGGCA GCACCGTCCG GACCGCGAAC CGGAGCCGGA AGCCGAGCCG    60
GAGCCGGAAA CCGGACCGGA GACCCCCGAG GAGGCGGAGC GCGGTCCGAG CCGCCTCAAA   120
CCGGTCGTGT TCTACGGCTC GTCCGCGCTG ATCGTCGCGC TCTCGGTCTG GGCGATCGTC   180
GCGCCCACGC ACGCCGGGAA CACCATCGGC GCCGTCGTGA CGTGGATCAC CGAGGTGTTC   240
GGCTGGTACT ACTTCCTCGC CACCACCCTC TACCTCGGGT TCGTGGTGGT CATCGCGCTC   300
TCCCGCTACG GCAGGGTCAA GCTCGGCCCC CAGCACTCCA AGCCCGACTA CGGGGTGTTC   360
GCCTGGGCGG CCATGCTGTT CGCGGCGGGC ATCGGCATCG ACCTGCTGTT CTTCTCCGTC   420
TCCGGGCCGG TCAGCCACTA CCTGGCGCCG CCCGAGGGCG ACGCGCAGAC CGTCGAGGCG   480
GCGCGGCAGG CCGTGGTGTG GACGCTCTTC CACTACGGCG TGACCGGGTG GGCGATGTAC   540
GCGCTGATGG GCATGGCCCT GGGCTACTTC TCCTTCCGCT ACCACCTGCC CCTGGCCATC   600
CGGTCGGCCC TGTACCCGCT GATCGGCAGG CGCATCCACG GCCCGGTCGG CGACGCGGTC   660
GACCTGGCGG CCGTCATCGG CACGATCTTC GGCATCTCCG TGTCGCTCGG CATCGGCGTC   720
GTGCAGCTCA ACTACGGGCT CAACTTCCTC TTCGGCGTCC CCGAGGGCGT CGCGGCCCAG   780
CTCGGCCTGA TCATCGTCGC CGTGCTCGTG GCCACGATGT CGGCGGTGGC GGGCGTGGAC   840
CGGGGTATCC GGCGGCTGTC CGAGATCAAC GTCGTGCTAG CCGTCGTCCT GATGCTCTAC   900
GTGCTGGTCT TCGAGGACCC CCTCTACCTG CTCAACGCCC TCGTCCTCAA CATCGGCGAC   960
TACCTCAGCC GCTTCCCCTC CATGACGCTG AACACCTTCG CCTACGACCC GCCGACCGAC  1020
TGGCTCAACG CCTGGACGCT GTTCTTCTGG GCCTGGTGGA TCGCCTGGGC GCCGTTCGTG  1080
GGGATGTTCC TCGCCCGGAT CTCGCGCGGC CGCACCATCC GGCAGTTCGT GGCGGCGACG  1140
CTGGTGGTCC CGCTCCTGTT CACGCTGACC TTCCTGTCCT TCTTCGGCAA CAGCGCGCTG  1200
AGCGTCGTGC GCGAGGGCGG CGCCGCGTTC GGCCAGACCA CCATGAACCA CCCCGAACAG  1260
GGCTTCTACG CGCTGCTCGC GCAGTACCCG GGGGTGCTGT TCAGCGCCGG GCTGGCCACG  1320
GTCGTCGGAC TGCTCTTCTA CGTCACCTCC GCCGACTCCG GCGCGCTGGT GATGGGCAAC  1380
CTCAGCTCCC ACCTGCCGAC GCCGCTCACC GACGCCTCCC CGTGGCTGCG CGTCTTCTGG  1440
TCGGCGGCGA CCGGCCTGCT CACCCTCGCC ATGCTCCTGG TCGGCGGGGT GGACACGCTG  1500
ACCAGCGCGA CCATCATCAT GGGCCTGCCG TTCTCGTTCG TGATGTTCGT GATCATGTGG  1560
GGCCTGTTCA AGGCGCTGCG GATCGAGAAG TTCCGCAAGG ACGCCTTCCG GACCACCCTG  1620
TCCTCGTCGC TGTCGGACCG GACCGCGGCC GACCGGCGGG GGCCCGAACG CAACTGGCGG  1680
CAGCGGATCA AGCGGGCGGT GAGCTTCCCC GGCAGGCGGG CGGCCGAGCG GTTCGTCCGC  1740
GACGTGTGCC GCCCGGCGTT CCGGGACGTC GCCGAGGAGC TGCGCGAACA CGGCGCGGAG  1800
GCGTCGGTGA GCGAGGGGGT GGACGAGGCC GTCGGCATCG CCTACCTGGA GCTGCGGGCG  1860
CCGATGGGCG AGGAGGAGGA GTTCAGCTAC CGGGTGTGGC CGATGGAGGT GCCCACCCCC  1920
GCGTTCGCCA TGCGCTCGCT CGCCGAGCAC GACACCTACG TGCGCTTCGA GGTCTACCTC  1980
ACCGAGGGCA GCCAGGGCTA CGACGTGATG GGCTACACCA AGGAGCAGCT CATCGGCAAC  2040
ATCCTCGACG AGTACGAGCG GCACCTGGAG TTCCTGCGGC TGCACCGGGA GGCGACCTCG  2100
GGCTCCGCGC TTCCCGACCA CGGGCCGGGC ACCGCCGACG TCCAGGACAC CGAGGAGCGC  2160
TGA                                                                2163