Entry LOTJA23089 (Lj2g3v2353630)

E Lotus japonicus


General Information

Description
Lj2g3v2353630.1 tr|G7JZQ0|G7JZQ0_MEDTR Sorting nexin-1 OS=Medicago truncatula GN=MTR_5g073280 PE=4 SV=1,85.31,0,PX domain,Phox homologous domain; BAR/IMD domain-like,NULL; no description,Phox homologous domain; P,CUFF.38876.1
Organism
LOTJA - Lotus japonicus (Taxon-ID: 34305)
Locus
chr2join(complement(33858979..33860115), complement(33858508..33858717), complement(33858056..33858319), complement(33854425..33854511), complement(33853049..33853129))
Number of exons
5
Alternative splicing
LOTJA23090

IDs and Cross-references

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Domain Architecture

Gene Ontology

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Protein Sequence

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MVFFNLTISN HYTSAHVSLR HRHLPRTLTL QTRFPLNLHP FHSLTTTTNL ADRTSNITLT    60
LLHFPNPNRS KKSSNNDGLR ESYLGGAPPP PSLRRRRAQR RNGKFSNPNS HDTSSYLATP   120
SYADAVFSPF DGETASNCVD SPTSSSDGLS LSRSPSSSSE YLKITVSNPV KEQENSNSIV   180
PGGSSYVTYL ITTRTNVLEF GGSEFAVRRR FRDIVTLSDR LSEAYRGFFI PPRPDKSIVE   240
SQVMQKQEFV EQRRVALEKY LRRLADHPVI RKSDEFRVFL QVQGRMPLPL TTDVASRVLD   300
GAAKLPKQLL GESVIAPHEV VQPAKGGRDL MRLFKELKQS MANDWGGSKP PVVEEDKEFL   360
EKKERIQELE QQINGASQQA ESLVKAQQDM GETLGELGLA FIKLTKFENE EAVLNSQRVR   420
ATDMKGVATA AVKASRLYRE LNAQTVKHLQ DTLHEYLGLM LAVHSAFSDR SSALLTVQTL   480
LSELSSLQSR AEKLEAASSK IFGGDKSRIR KLEELQETIR VTEDAKNIAI REYERIKENN   540
RSELERLDSE RQADFLNMLK GFVVNQVGYA EKIANVWTKV AEETRKYVNE ST           592

Coding Sequence

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ATGGTCTTCT TCAACCTCAC CATCTCAAAC CATTACACCT CGGCGCACGT TAGCCTCCGC    60
CACCGACACC TGCCACGAAC ACTGACACTC CAAACGCGAT TTCCCCTTAA CCTACACCCA   120
TTCCATTCCC TCACCACCAC CACCAACCTC GCTGATCGAA CAAGCAACAT CACCCTCACA   180
CTTCTCCACT TTCCCAATCC CAATCGATCG AAGAAATCAT CAAACAATGA TGGACTCCGA   240
GAATCATACC TCGGAGGAGC ACCACCACCA CCCTCTCTCC GCCGCCGCCG CGCCCAGAGA   300
AGAAATGGAA AGTTCTCAAA CCCTAACTCC CACGATACTT CCTCCTACCT CGCCACGCCA   360
TCCTACGCCG ACGCTGTTTT CAGCCCCTTC GACGGAGAAA CGGCCTCCAA CTGTGTCGAT   420
AGCCCTACGA GCAGCTCTGA TGGGCTTTCC CTCTCGAGAT CCCCTTCTTC GAGCTCGGAG   480
TATTTGAAAA TAACCGTTTC GAATCCGGTG AAGGAGCAGG AGAATTCGAA TTCGATTGTT   540
CCCGGTGGGA GTAGTTACGT GACGTATTTG ATCACGACGA GGACGAATGT TCTGGAGTTT   600
GGCGGGTCTG AGTTCGCGGT GAGGAGAAGG TTTAGGGATA TTGTGACGCT ATCCGATCGG   660
TTATCGGAGG CGTATAGAGG GTTTTTCATT CCGCCGAGGC CGGATAAGAG CATTGTGGAG   720
AGCCAGGTGA TGCAGAAACA GGAGTTTGTG GAGCAGAGGA GGGTGGCGTT GGAGAAGTAT   780
CTTCGAAGAT TGGCGGATCA TCCGGTGATC AGGAAGAGTG ATGAGTTCAG GGTGTTCCTG   840
CAGGTTCAGG GGAGGATGCC GCTGCCATTG ACGACGGACG TGGCATCGAG GGTTTTGGAT   900
GGTGCGGCGA AGCTTCCCAA GCAGTTGCTA GGGGAGAGTG TGATTGCCCC GCACGAGGTT   960
GTGCAGCCTG CCAAAGGGGG AAGGGATTTG ATGAGGTTGT TTAAGGAGTT GAAGCAGTCT  1020
ATGGCTAATG ACTGGGGAGG TTCCAAGCCA CCGGTTGTGG AGGAAGACAA GGAGTTCCTG  1080
GAGAAGAAAG AAAGGATTCA GGAACTTGAA CAGCAAATCA ATGGTGCATC TCAGCAGGCC  1140
GAATCACTTG TCAAAGCACA GCAAGATATG GGAGAGACAT TGGGTGAATT AGGGTTGGCA  1200
TTTATTAAAT TGACAAAATT TGAGAATGAA GAGGCTGTCT TGAACTCGCA GAGGGTACGG  1260
GCTACTGACA TGAAAGGTGT TGCAACCGCT GCTGTTAAAG CTAGCAGATT ATATCGAGAA  1320
TTAAATGCTC AGACTGTGAA GCATTTGCAG GATACGCTTC ATGAATATCT TGGATTAATG  1380
TTGGCAGTTC ATAGTGCATT CTCGGATCGT TCTAGTGCAC TGTTGACAGT GCAGACTCTT  1440
CTATCAGAAC TGTCTTCTTT GCAGTCAAGA GCTGAAAAAC TTGAAGCAGC ATCATCTAAA  1500
ATTTTTGGAG GTGACAAATC GAGGATTCGT AAGTTAGAGG AGCTACAGGA AACCATAAGA  1560
GTCACTGAAG ACGCCAAAAA CATTGCAATT AGAGAATACG AGCGGATCAA GGAAAACAAT  1620
AGGAGTGAAC TTGAAAGACT GGATAGCGAG AGGCAGGCTG ACTTCTTAAA CATGTTGAAA  1680
GGATTCGTAG TTAATCAGGT GGGGTATGCT GAGAAAATAG CTAATGTCTG GACAAAAGTT  1740
GCTGAAGAGA CACGAAAATA TGTGAATGAA AGCACTTAA                         1779