Entry DIPOR14563 (ENSDORG00000011841)

E Dipodomys ordii


General Information

Description
collagen, type XI, alpha 1 [Source:MGI Symbol;Acc:MGI:88446]
Organism
DIPOR - Dipodomys ordii (Taxon-ID: 10020)
Locus
GeneScaffold_385join(complement(172467..172632), complement(169706..169919), complement(167725..167887), complement(161949..162077), complement(155857..156006), complement(155570..155662), complement(152893..153138), complement(152171..152233), complement(149920..149961), complement(148872..148934), complement(147175..147249), complement(146039..146122), complement(143449..143505), complement(139603..139656), complement(137761..137814), complement(137441..137489), complement(137434..137438), complement(137210..137263), complement(136088..136141), complement(135795..135839), complement(134376..134429), complement(133909..133953), complement(133607..133660), complement(133053..133097), complement(127334..127387), complement(126147..126191), complement(124447..124500), complement(124322..124366), complement(121558..121611), complement(119210..119317), complement(115494..115547), complement(114606..114659), complement(114433..114477), complement(114286..114339), complement(114121..114165), complement(109636..109689), complement(105681..105734), complement(101305..101358), complement(97971..98078), complement(97557..97583), complement(97540..97554), complement(97496..97537), complement(93656..93709), complement(91056..91163), complement(88935..89021), complement(88915..88932), complement(88615..88668), complement(86387..86440), complement(86179..86286), complement(79509..79562), complement(78477..78530), complement(77141..77194), complement(71613..71666), complement(70794..70901), complement(70451..70504), complement(69787..69840), complement(65706..65759), complement(60566..60619), complement(60365..60472), complement(59366..59419), complement(52605..52658), complement(51230..51337), complement(49736..49789), complement(49599..49634), complement(49450..49503), complement(46940..47189), complement(43968..44080), complement(41560..41628), complement(37566..37799), complement(36242..36388))
Number of exons
70

IDs and Cross-references

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Domain Architecture

Gene Ontology

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Protein Sequence

Download: Fasta
APVDVLKALD FHKSPEGITK TTGFCTNRKN SKGSDTAYRV SKLAQISAPT KQLFPAGNFP    60
EDFSILFTVK PKKGIQSFLL SIYNEHGIQQ VGVEVGRSPV FLFEDHTGKP APEDYPLFRT   120
VNIADGKWHR VAISVEKKTV TMIVDCKKKT TKPLDRSERS IVDTNGITVF GTRILDEEVF   180
EGDIQQFLIS SDPKAAYDYC EHYSPDCDST APKAAQAQEP QIDEKKKSNF KKKTRTVTTY   240
SKETKKFTPP KSEKFASKKK KSYQAPAKAK LGVKANIVED FQEYNYGTME SYQTETPVPV   300
SGTNEPYPVE EGFTEEYLTG EDYDPQRKNS EDTLYENKEI DGRDSDLPVD GDLGEYDFYD   360
YEDKPTSPSI EEFGPGVPAE TDFTETSING HGAYGEKGQK GEPAVVEPGM LVEGPPGPAG   420
PAGLMGPPGL QGPSGPPGDP GDRGPPGRPG LPGADGLPGP PGTMLMLPFR YGGDGSKGPT   480
ISAQEAQAQA ILQQARIALR GPPGPMGLTG RPGPVGGPGS AGAKGESGDP GPQXKGDRGF   540
DGLPGLPGDK GHRGERGPQG PPGLPGDDGM RGEDGEIGPR GLPGEAGPRG LLGPRGTPGP   600
TGQPGIAGID GPPGPKGNMG PQGEPGPPGQ QGNPGPQGLP GPQGPIGPPG EKGPQGKPGL   660
AGLPGADGPP GHPGKEGQSG EKGALGPPGP QGPIGYPGPR GVKGADGVRG LKGSKGEKGE   720
DGFPGFKGDM GLKGDRGEVG QLGPRGEDGP EGPKGRAGPT GDPGPSGQAG EKGKLGVPGL   780
PGYPGRQGPK GSTGFPGFPG ANGEKGARGV AGKPGPRGQR GPTGPRGSRG ARGPTGKPGL   840
KGTSGGDGPP GPPGERGPQG PQGPVGFPGP KGPPGPPGKD GLPGHPGQRG ETGFQGKTGP   900
PGPGGVVGPQ GPTGETGPIG ERGHPGPPGP PGEQGLPGAA GKEGAKGDPG PQGISKDGPA   960
LRGFPGERGL XGSPGERGSA GTAGPIGLPG RPGPQGPPGP AGEKGAPGEK GPQGPAGRDG  1020
VQGPVGLPGP AGPAGSGEDG XXGEIGEPGQ KGSKGDKGEN XGLPGPPGEK GENGDVGPMG  1080
PPGPPGPRGP QGPNGADGPQ GPSGSVGSVG GVGQKGEPGE AGNPGPPGEA GSGGPKGERG  1140
EKGEAGPPGA AGPPGAKGPP GDDGPKGNPG PVGFPGDPGP PGEPGPAGQD GVGGDKGEDG  1200
DPGQPXGPPG TTGAEGRQGE KGAKGEAGAE GPPGKTGPVG PQGPSGKPGP EGLRGIPGPV  1260
GEQGLPGAAG QDGPPGPIGP PGLPGLKGDP GSKGEKRHPG LIGLIGPPGE QGEKGDRGLP  1320
GTQGSPGAKG DGGIPGPAGP IGPPGPPGLP GPQGPKGNKG SSGPAGQKGD SGLPGPPGPP  1380
GPPGEVIQPL PILSPKKTRR HTESVQADAV DNILDYSDGM EEIFGSLSSL KQDIEHMKFP  1440
MGTQSNPART CKDLQLSHPD FPDXVRISSW PKEKPGSWFS EFKRGKLLSY LDVEGNSINM  1500
VQMTFLKLLT ASARQNFTYN CHQSAAWYDA SSGSYDKALR FLGSNDEEMS YENSPYIKAL  1560
YDGCASRKGY EKTVIEINTP KIDQVPVIDV MINDFGDQNQ KFGFEVGPVC FLG         1613

Coding Sequence

Download: Fasta
GCTCCAGTTG ATGTACTAAA AGCACTAGAT TTTCACAAAT CTCCAGAGGG AATAACAAAA    60
ACAACAGGAT TCTGCACAAA CAGAAAGAAT TCAAAAGGGT CAGATACTGC TTACAGAGTT   120
TCAAAGCTAG CACAAATCAG TGCTCCAACC AAACAACTCT TTCCAGCAGG AAATTTCCCT   180
GAAGATTTCT CAATATTATT CACAGTAAAA CCCAAAAAAG GAATTCAATC TTTCCTTTTA   240
TCTATCTATA ATGAACATGG TATTCAGCAA GTTGGTGTTG AGGTTGGAAG ATCACCTGTT   300
TTTCTGTTTG AAGACCACAC TGGAAAACCC GCCCCAGAAG ACTATCCCCT CTTTAGAACT   360
GTTAATATTG CTGATGGAAA GTGGCATCGA GTAGCAATCA GCGTGGAGAA GAAAACCGTG   420
ACGATGATTG TGGATTGTAA GAAGAAAACC ACAAAACCAC TCGACAGAAG TGAGAGATCG   480
ATTGTGGATA CCAATGGGAT TACCGTGTTT GGAACAAGGA TTTTGGATGA AGAAGTTTTT   540
GAGGGTGACA TTCAGCAGTT CCTGATCTCT AGCGATCCCA AGGCTGCATA TGACTACTGT   600
GAGCACTACA GCCCTGACTG TGACTCCACC GCACCCAAAG CTGCGCAGGC TCAGGAGCCT   660
CAGATCGACG AGAAAAAGAA ATCCAATTTC AAAAAGAAGA CGAGGACAGT GACTACTTAC   720
TCAAAGGAAA CCAAAAAGTT TACACCCCCC AAATCTGAAA AATTTGCATC CAAGAAGAAG   780
AAAAGTTATC AAGCACCAGC AAAAGCCAAG CTAGGGGTAA AGGCCAATAT TGTAGAGGAC   840
TTCCAAGAGT ATAACTATGG AACAATGGAA AGTTACCAGA CAGAAACTCC TGTTCCTGTG   900
TCTGGCACGA ATGAGCCATA TCCTGTTGAA GAAGGTTTTA CTGAAGAATA TCTTACTGGA   960
GAGGATTATG ACCCTCAGAG GAAAAATTCC GAGGATACAC TATATGAAAA CAAAGAAATA  1020
GACGGCAGGG ACTCTGACCT TCCGGTAGAT GGAGATTTAG GCGAATATGA TTTTTATGAC  1080
TATGAAGATA AACCAACCAG CCCCTCTATT GAAGAATTTG GGCCAGGCGT ACCAGCAGAA  1140
ACTGATTTCA CAGAGACAAG TATTAATGGC CATGGTGCCT ATGGAGAAAA AGGACAGAAG  1200
GGAGAACCGG CTGTGGTGGA ACCTGGAATG CTTGTTGAAG GACCCCCTGG ACCAGCAGGA  1260
CCTGCAGGCC TTATGGGTCC CCCAGGCCTC CAGGGTCCTT CTGGACCCCC CGGTGACCCT  1320
GGTGATAGGG GCCCCCCCGG ACGCCCTGGC TTACCAGGGG CTGATGGCCT GCCCGGCCCT  1380
CCTGGTACTA TGCTGATGTT ACCGTTTCGT TATGGTGGTG ACGGTTCCAA AGGACCAACC  1440
ATCTCTGCTC AGGAAGCACA AGCCCAGGCC ATTCTGCAGC AGGCTCGGAT TGCACTAAGA  1500
GGTCCACCAG GCCCAATGGG TCTCACTGGA AGGCCCGGTC CTGTGGGGGG CCCTGGTTCT  1560
GCGGGGGCCA AAGGTGAGAG TGGTGACCCA GGTCCTCAGX XXAAGGGAGA TCGAGGGTTT  1620
GATGGCCTAC CTGGTCTGCC AGGGGACAAA GGTCACAGGG GTGAACGCGG TCCCCAAGGC  1680
CCTCCAGGCC TTCCAGGCGA TGATGGAATG AGGGGAGAAG ATGGAGAAAT AGGGCCACGT  1740
GGTCTTCCAG GTGAAGCTGG CCCAAGAGGT TTGCTGGGAC CACGAGGAAC CCCAGGCCCT  1800
ACAGGGCAAC CTGGCATTGC AGGCATAGAT GGCCCCCCAG GACCCAAAGG TAACATGGGT  1860
CCCCAAGGAG AGCCAGGACC TCCTGGCCAG CAAGGAAATC CAGGACCTCA AGGTCTTCCT  1920
GGTCCTCAAG GTCCAATTGG TCCTCCTGGT GAAAAAGGAC CACAAGGAAA ACCAGGACTT  1980
GCTGGACTTC CTGGTGCTGA TGGGCCTCCT GGTCATCCAG GAAAAGAAGG CCAGTCTGGG  2040
GAAAAGGGAG CTCTGGGCCC TCCTGGTCCC CAAGGTCCTA TTGGCTACCC TGGTCCCCGA  2100
GGAGTGAAGG GAGCGGATGG CGTTAGAGGT CTCAAGGGAT CTAAAGGCGA AAAGGGTGAA  2160
GATGGCTTTC CAGGATTCAA AGGTGACATG GGTCTCAAAG GTGACAGAGG AGAAGTTGGT  2220
CAACTAGGCC CAAGAGGAGA AGATGGTCCT GAAGGCCCTA AAGGTCGTGC GGGGCCAACT  2280
GGAGACCCTG GTCCTTCTGG TCAGGCAGGA GAGAAGGGAA AACTTGGAGT TCCAGGATTA  2340
CCAGGATATC CAGGAAGACA AGGTCCAAAG GGTTCCACTG GATTTCCCGG ATTTCCAGGT  2400
GCCAACGGGG AGAAAGGTGC ACGGGGTGTA GCTGGGAAAC CAGGCCCTCG CGGTCAGCGT  2460
GGTCCAACGG GTCCTCGAGG TTCGAGGGGA GCGAGAGGCC CCACTGGGAA GCCGGGCCTA  2520
AAGGGCACTT CTGGTGGAGA TGGCCCTCCA GGCCCTCCTG GTGAAAGGGG CCCTCAAGGA  2580
CCTCAAGGTC CAGTCGGATT CCCAGGACCC AAAGGCCCCC CTGGGCCGCC TGGGAAAGAT  2640
GGGCTTCCAG GACACCCTGG GCAACGTGGA GAAACTGGAT TTCAAGGCAA GACAGGTCCC  2700
CCTGGACCAG GAGGTGTGGT TGGACCACAG GGACCAACGG GTGAGACTGG TCCAATAGGT  2760
GAACGTGGAC ATCCTGGACC TCCTGGACCA CCTGGAGAGC AAGGGCTTCC TGGTGCTGCA  2820
GGAAAAGAAG GTGCAAAGGG TGACCCAGGT CCTCAAGGTA TCTCAAAAGA TGGACCAGCA  2880
TTACGCGGTT TCCCAGGTGA ACGAGGTCTT XXXGGCTCAC CTGGAGAACG TGGATCAGCT  2940
GGCACCGCAG GACCCATTGG GTTGCCTGGG AGACCAGGAC CCCAAGGCCC CCCGGGCCCA  3000
GCTGGAGAAA AAGGTGCACC AGGAGAGAAA GGTCCTCAAG GCCCTGCAGG AAGAGATGGG  3060
GTCCAAGGCC CTGTGGGTCT CCCTGGGCCA GCTGGCCCTG CCGGCTCCGG AGAAGATGGX  3120
XXXXXXGGTG AAATTGGTGA ACCAGGACAG AAAGGCAGCA AGGGTGACAA AGGAGAGAAT  3180
XXXGGTCTTC CAGGCCCACC TGGTGAGAAA GGAGAAAATG GTGACGTTGG CCCCATGGGT  3240
CCACCTGGTC CTCCTGGCCC AAGAGGCCCT CAAGGCCCTA ATGGAGCTGA TGGACCACAA  3300
GGACCTTCAG GATCTGTTGG CTCAGTTGGT GGTGTTGGGC AAAAGGGTGA ACCTGGAGAA  3360
GCAGGAAACC CCGGACCTCC TGGTGAAGCA GGTTCTGGCG GTCCAAAAGG AGAAAGAGGA  3420
GAAAAGGGAG AAGCTGGCCC ACCAGGTGCT GCTGGACCTC CAGGTGCTAA AGGGCCACCG  3480
GGTGACGATG GTCCCAAGGG AAACCCGGGT CCTGTTGGTT TTCCTGGAGA CCCTGGCCCT  3540
CCTGGGGAGC CCGGCCCTGC AGGTCAAGAT GGTGTTGGAG GTGATAAGGG AGAAGATGGA  3600
GACCCCGGAC AGCCGXXXGG TCCTCCTGGT ACTACAGGTG CAGAGGGACG GCAAGGAGAA  3660
AAAGGTGCTA AGGGAGAGGC AGGTGCTGAA GGTCCCCCTG GGAAAACTGG TCCTGTGGGT  3720
CCTCAAGGCC CTTCTGGAAA GCCTGGTCCT GAAGGTCTTC GTGGCATCCC TGGGCCCGTG  3780
GGAGAACAAG GTCTTCCAGG AGCTGCAGGT CAAGATGGAC CTCCAGGTCC AATTGGGCCT  3840
CCTGGCTTAC CTGGCCTCAA AGGTGACCCT GGCTCCAAAG GAGAAAAGAG ACATCCTGGT  3900
TTAATTGGCC TGATTGGTCC TCCAGGGGAA CAAGGAGAAA AGGGTGACAG GGGTCTCCCT  3960
GGTACTCAGG GATCTCCAGG AGCAAAGGGA GATGGGGGAA TTCCAGGCCC TGCTGGCCCC  4020
ATAGGCCCAC CTGGCCCTCC AGGATTACCA GGTCCTCAAG GCCCCAAGGG TAACAAAGGC  4080
TCTTCCGGAC CTGCAGGCCA AAAGGGTGAC AGTGGCCTTC CCGGACCGCC TGGACCTCCG  4140
GGTCCACCTG GTGAAGTTAT TCAACCTTTA CCAATCCTGT CACCCAAGAA AACAAGAAGA  4200
CATACTGAGA GTGTGCAGGC AGATGCAGTG GATAACATTC TTGACTACTC AGATGGAATG  4260
GAAGAGATAT TTGGTTCCCT CAGTTCTCTG AAGCAAGACA TTGAGCACAT GAAATTTCCA  4320
ATGGGCACTC AGAGCAATCC GGCTCGGACA TGCAAAGATC TGCAACTCAG CCATCCTGAC  4380
TTCCCAGATX XXGTAAGAAT TTCCTCGTGG CCAAAAGAGA AACCAGGAAG TTGGTTTAGT  4440
GAATTTAAAA GGGGAAAACT GCTTTCGTAT TTAGATGTTG AAGGCAATTC TATTAATATG  4500
GTGCAAATGA CATTCCTGAA ACTTCTGACG GCCTCTGCAC GGCAGAACTT CACCTATAAC  4560
TGTCATCAGT CAGCTGCCTG GTACGATGCA TCCTCGGGAA GCTATGACAA AGCGCTTCGG  4620
TTCCTGGGGT CCAATGATGA GGAGATGTCC TATGAGAACA GCCCCTACAT CAAGGCTCTG  4680
TATGACGGCT GCGCGTCCCG AAAAGGCTAT GAGAAGACTG TGATTGAAAT CAATACGCCG  4740
AAAATTGATC AAGTACCTGT CATTGATGTC ATGATCAATG ATTTTGGTGA TCAGAATCAG  4800
AAGTTTGGAT TTGAAGTTGG TCCAGTTTGT TTCCTTGGCT AA                     4842