<?xml version='1.0' encoding='UTF-8'?> <orthoXML xmlns="http://orthoXML.org/2011/" origin="OMA" originVersion="Jun 2024" version="0.5"> <species name="Oryza glaberrima" NCBITaxId="4538" taxonId="493"> <database name="Oryza glaberrima from ENSEMBL plants v21" version="Ensembl Plants 21; AGI1.1; 6-DEC-2013"> <genes> <gene id="21190068" protId="ORYGL09001"/> </genes> </database> </species> <species name="Nymphaea colorata" NCBITaxId="210225" taxonId="453"> <database name="Nymphaea colorata from Refseq" version="Refseq; ASM883128v1; GCF_008831285.2; 15-AUG-2022; Nymphaea colorata Annotation Release 101"> <genes> <gene id="24660836" protId="NYMNZ07002"/> </genes> </database> </species> <species name="Persea americana" NCBITaxId="3435" taxonId="461"> <database name="Persea americana from Refseq" version="Refseq; ASM2985273v1; GCA_029852735.1; 21-APR-2023; ASM2985273v1"> <genes> <gene id="22531855" protId="PERAE20507"/> </genes> </database> </species> <species name="Prunus dulcis" NCBITaxId="3755" taxonId="560"> <database name="Prunus dulcis from Ensembl Plants 50" version="Ensembl Plants 50; ALMONDv2"> <genes> <gene id="23889539" protId="PRUDU10278"/> </genes> </database> </species> <species name="Prunus persica" NCBITaxId="3760" taxonId="561"> <database name="Prunus persica from ENSEMBL plants v23" version="Ensembl Plants 23; GCA_000346465.1; 19-JUL-2014"> <genes> <gene id="23914790" protId="PRUPE02976"/> </genes> </database> </species> <species name="Musa acuminata subsp. malaccensis" NCBITaxId="214687" taxonId="469"> <database name="Musa acuminata subsp. malaccensis from Ensembl Plants 53" version="Ensembl Plants 53; Musa_acuminata_v2; GCA_904845865.1"> <genes> <gene id="22496209" protId="MUSAM30450"/> </genes> </database> </species> <species name="Oryza sativa subsp. indica" NCBITaxId="39946" taxonId="498"> <database name="Oryza Indica from ENSEMBL plants v21" version="Ensembl Plants 21; ASM465v1; 4-DEC-2013"> <genes> <gene id="21362963" protId="ORYSI11856"/> </genes> </database> </species> <species name="Theobroma cacao" NCBITaxId="3641" taxonId="533"> <database name="Theobroma cacao from ENSEMBL plants v23" version="Ensembl Plants 23; GCA_000403535.1; 19-JUL-2014"> <genes> <gene id="24318627" protId="THECC10456"/> </genes> </database> </species> <species name="Cucumis sativus" NCBITaxId="3659" taxonId="551"> <database name="Cucumis sativus from Ensembl Plants 38" version="Ensembl Plants 38; ASM407v2"> <genes> <gene id="23377460" protId="CUCSA00536"/> </genes> </database> </species> <species name="Vitis vinifera" NCBITaxId="29760" taxonId="530"> <database name="Vitis vinifera from ENSEMBL Plants v8" version="Ensembl Plants v9; IGGP_12x; 14-APR-2011"> <genes> <gene id="24640938" protId="VITVI13311"/> </genes> </database> </species> <species name="Setaria italica" NCBITaxId="4555" taxonId="471"> <database name="Setaria italica from ENSEMBL plants v21" version="Ensembl Plants 21; JGIv2.0; 3-DEC-2013"> <genes> <gene id="22378904" protId="SETIT01228"/> </genes> </database> </species> <species name="Daucus carota subsp. sativus" NCBITaxId="79200" taxonId="512"> <database name="Daucus carota subsp. sativus from Ensembl Plants 44" version="Ensembl Plants 44; ASM162521v1"> <genes> <gene id="23005512" protId="DAUCS03923"/> </genes> </database> </species> <species name="Zostera marina" NCBITaxId="29655" taxonId="467"> <database name="Zostera marina from OrcAE" version="OrcAE"> <genes> <gene id="21121122" protId="ZOSMR20456"/> </genes> </database> </species> <species name="Aegilops tauschii subsp. strangulata" NCBITaxId="200361" taxonId="483"> <database name="Aegilops tauschii subsp. strangulata from Refseq" version="Refseq; Aet v5.0; GCF_002575655.2; 02-DEC-2021"> <genes> <gene id="21723252" protId="AEGTS42203"/> </genes> </database> </species> <species name="Ginkgo biloba" NCBITaxId="3311" taxonId="442"> <database name="Ginkgo biloba from Ginko DB" version="Ginko DB"> <genes> <gene id="20844678" protId="GINBI03855"/> <gene id="20844679" protId="GINBI03856"/> <gene id="20854414" protId="GINBI13591"/> </genes> </database> </species> <species name="Oryza brachyantha" NCBITaxId="4533" taxonId="492"> <database name="Oryza brachyantha from ENSEMBL plants v21" version="Ensembl Plants 21; Oryza_brachyantha.v1.4b; 5-DEC-2013"> <genes> <gene id="21159395" protId="ORYBR09635"/> </genes> </database> </species> <species name="Oryza nivara" NCBITaxId="4536" taxonId="495"> <database name="Oryza nivara from ENSEMBL plants v23" version="Ensembl Plants 23; AWHD00000000; 19-JUL-2014"> <genes> <gene id="21254694" protId="ORYNI12091"/> </genes> </database> </species> <species name="Actinidia chinensis var. chinensis" NCBITaxId="1590841" taxonId="511"> <database name="Actinidia chinensis var. chinensis from Ensembl Plants 45" version="Ensembl Plants 45; Red5_PS1_1.69.0"> <genes> <gene id="22980608" protId="ACTCC12134"/> <gene id="22976025" protId="ACTCC07551"/> </genes> </database> </species> <species name="Kalanchoe fedtschenkoi" NCBITaxId="63787" taxonId="507"> <database name="Kalanchoe fedtschenkoi from Ensembl Plants 53" version="Ensembl Plants 53; K_fedtschenkoi_M2_v1; GCA_002312845.1"> <genes> <gene id="22934425" protId="KALFE11138"/> <gene id="22933611" protId="KALFE10324"/> </genes> </database> </species> <species name="Beta vulgaris subsp. vulgaris" NCBITaxId="3555" taxonId="508"> <database name="Beta vulgaris subsp. vulgaris from Ensembl Plants 53" version="Ensembl Plants 53; RefBeet-1.2.2"> <genes> <gene id="22875514" protId="BETVV25724"/> </genes> </database> </species> <species name="Picea sitchensis" NCBITaxId="3332" taxonId="447"> <database name=" from Plaza" version="Plaza"> <genes> <gene id="20940112" protId="PICSI16319"/> </genes> </database> </species> <species name="Cajanus cajan" NCBITaxId="3821" taxonId="569"> <database name="Cajanus cajan from Ensembl Plants 56" version="Ensembl Plants 56; C.cajan_V1.0; GCA_000340665.1"> <genes> <gene id="23485301" protId="CAJCA02196"/> </genes> </database> </species> <species name="Citrus clementina" NCBITaxId="85681" taxonId="532"> <database name="Citrus clementina from Ensembl Plants 50" version="Ensembl Plants 50; Citrus_clementina_v1.0"> <genes> <gene id="24595317" protId="CITCL02247"/> </genes> </database> </species> <species name="Oryza longistaminata" NCBITaxId="4528" taxonId="494"> <database name="Oryza longistaminata from ENSEMBL plants v31" version="Ensembl Plants 31; O_longistaminata_v1.0; 1-APR-2016"> <genes> <gene id="21242247" protId="ORYLO29575"/> </genes> </database> </species> <species name="Phaseolus vulgaris" NCBITaxId="3885" taxonId="571"> <database name="Phaseolus vulgaris from Ensembl Plants 39" version="Ensembl Plants 39; PhaVulg1_0"> <genes> <gene id="23622778" protId="PHAVU16065"/> </genes> </database> </species> <species name="Solanum lycopersicum" NCBITaxId="4081" taxonId="523"> <database name="Solanum lycopersicum from Ensembl Plants 49" version="Ensembl Plants 49; SL3.0; GCA_000188115.3"> <genes> <gene id="23307100" protId="SOLLC06401"/> <gene id="23317662" protId="SOLLC16963"/> </genes> </database> </species> <species name="Amborella trichopoda" NCBITaxId="13333" taxonId="452"> <database name="Amborella trichopoda from ENSEMBL plants v23" version="Ensembl Plants 23; GCA_000471905.1; 19-JUL-2014"> <genes> <gene id="21096272" protId="AMBTC22877"/> <gene id="21080393" protId="AMBTC06998"/> </genes> </database> </species> <species name="Setaria viridis" NCBITaxId="4556" taxonId="472"> <database name="Setaria viridis from Ensembl Plants 53" version="Ensembl Plants 53; Setaria_viridis_v2.0; GCA_005286985.1"> <genes> <gene id="22418594" protId="SETVI05294"/> </genes> </database> </species> <species name="Triticum urartu" NCBITaxId="4572" taxonId="487"> <database name="Triticum urartu from ENSEMBL plants v19" version="Ensembl Plants 19; GCA_000347455.1; 26-JUN-2013"> <genes> <gene id="22095966" protId="TRIUA23147"/> </genes> </database> </species> <species name="Brachypodium distachyon" NCBITaxId="15368" taxonId="480"> <database name="Brachypodium distachyon from ENSEMBL plants v21" version="Ensembl Plants 21; v1.0; 6-DEC-2013"> <genes> <gene id="21439607" protId="BRADI13911"/> </genes> </database> </species> <species name="Marchantia polymorpha" NCBITaxId="3197" taxonId="435"> <database name="Marchantia polymorpha from Phytozome" version=""> <genes> <gene id="20735800" protId="MARPO17403"/> </genes> </database> </species> <species name="Klebsormidium flaccidum" NCBITaxId="3175" taxonId="430"> <database name="Klebsormidium flaccidum" version="DF238761.1 GI:645719678"> <genes> <gene id="20626391" protId="KLEFL08969"/> <gene id="20623722" protId="KLEFL06300"/> </genes> </database> </species> <species name="Eragrostis tef" NCBITaxId="110835" taxonId="470"> <database name="Eragrostis tef from tef-research" version="v1"> <genes> <gene id="22129983" protId="ERATE24529"/> <gene id="22125291" protId="ERATE19837"/> </genes> </database> </species> <species name="Picea glauca" NCBITaxId="3330" taxonId="446"> <database name="Pinus glauca from Plaza" version="Plaza; SMarTForests"> <genes> <gene id="20905748" protId="PICGL10099"/> </genes> </database> </species> <species name="Macleaya cordata" NCBITaxId="56857" taxonId="458"> <database name="Macleaya cordata from Refseq" version="Refseq; MC_HNAU_1.0; GCA_002174775.1; 07-JUN-2017"> <genes> <gene id="22755193" protId="MACCD01823"/> <gene id="22765124" protId="MACCD11754"/> </genes> </database> </species> <species name="Ricinus communis" NCBITaxId="3988" taxonId="554"> <database name="Ricinus communis from Genbank" version="Genbank; ASM1957865v1; GCF_019578655.1; 20-MAY-2022"> <genes> <gene id="23749466" protId="RICCO24770"/> <gene id="23731251" protId="RICCO06555"/> </genes> </database> </species> <species name="Aegilops tauschii" NCBITaxId="37682" taxonId="482"> <database name="Aegilops tauschii from ENSEMBL plants v21" version="Ensembl Plants 21; GCA_000347335.1; 6-DEC-2013"> <genes> <gene id="21680021" protId="AEGTA32767"/> </genes> </database> </species> <species name="Lotus japonicus" NCBITaxId="34305" taxonId="567"> <database name="Lotus japonicus from modENCODE" version=""> <genes> <gene id="23463865" protId="LOTJA20205"/> </genes> </database> </species> <species name="Physcomitrium patens" NCBITaxId="3218" taxonId="434"> <database name="Physcomitrella patens from ENSEMBL plants v21" version="Ensembl Plants 21; ASM242v1; 4-DEC-2013"> <genes> <gene id="20702404" protId="PHYPA16782"/> <gene id="20710134" protId="PHYPA24512"/> </genes> </database> </species> <species name="Pinus taeda" NCBITaxId="3352" taxonId="445"> <database name=" from Plaza" version="Plaza"> <genes> <gene id="20965969" protId="PINTA21742"/> <gene id="20950862" protId="PINTA06635"/> <gene id="20969928" protId="PINTA25701"/> </genes> </database> </species> <species name="Lupinus angustifolius" NCBITaxId="3871" taxonId="565"> <database name="Lupinus angustifolius from Ensembl Plants 38" version="Ensembl Plants 38; LupAngTanjil_v1.0"> <genes> <gene id="23681107" protId="LUPAN09903"/> </genes> </database> </species> <species name="Zea mays" NCBITaxId="4577" taxonId="476"> <database name="Zea mays from Ensembl Plants 40" version="Ensembl Plants 40; AGPv4"> <genes> <gene id="22332319" protId="MAIZE54386"/> <gene id="22337449" protId="MAIZE59516"/> </genes> </database> </species> <species name="Miscanthus sinensis" NCBITaxId="62337" taxonId="474"> <database name="Miscanthus sinensis from Phytozome/JGI" version="Phytozome/JGI; Msinensis_v7_1"> <genes> <gene id="22182502" protId="MISSI35555"/> <gene id="22189838" protId="MISSI42891"/> </genes> </database> </species> <species name="Arabis alpina" NCBITaxId="50452" taxonId="540"> <database name="Arabis alpina from ENA" version="ENA; A_alpina_V4; GCA_000733195.1"> <genes> <gene id="24003750" protId="ARAAL18991"/> </genes> </database> </species> <species name="Welwitschia mirabilis" NCBITaxId="3377" taxonId="443"> <database name="Welwitschia mirabilis from CNGB" version="CNGB; W.mirabilis.final.new; 2021-06-18"> <genes> <gene id="20883839" protId="WELMI15180"/> </genes> </database> </species> <species name="Cynara cardunculus var. scolymus" NCBITaxId="59895" taxonId="514"> <database name="Cynara cardunculus var. scolymus from Ensembl Plants 45" version="Ensembl Plants 45; CcrdV1"> <genes> <gene id="23093467" protId="CYNCS07578"/> <gene id="23091013" protId="CYNCS05124"/> </genes> </database> </species> <species name="Glycine max" NCBITaxId="3847" taxonId="570"> <database name="Glycine max from Ensembl Plants 44" version="Ensembl Plants 44; Glycine_max_v2.1; GCA_000004515.4"> <genes> <gene id="23556949" protId="SOYBN25226"/> <gene id="23604668" protId="SOYBN72945"/> </genes> </database> </species> <species name="Sorghum bicolor" NCBITaxId="4558" taxonId="475"> <database name="Sorghum bicolor from Ensembl Plants 42" version="Ensembl Plants 42; Sorghum_bicolor_NCBIv3; GCA_000003195.3"> <genes> <gene id="22258304" protId="SORBI21871"/> </genes> </database> </species> <species name="Asparagus officinalis" NCBITaxId="4686" taxonId="468"> <database name="Asparagus officinalis from Ensembl Plants [103]" version="Ensembl Plants [103]; Aspof.V1"> <genes> <gene id="21145578" protId="ASPOF19959"/> </genes> </database> </species> <species name="Annona cherimola" NCBITaxId="49314" taxonId="463"> <database name="Annona cherimola from IHSM Subtropicals DB" version="IHSM Subtropicals DB; GCA_035061585.1; ASM3049083v1"> <genes> <gene id="22573659" protId="ANNCH19869"/> <gene id="22559002" protId="ANNCH05212"/> <gene id="22573664" protId="ANNCH19874"/> </genes> </database> </species> <species name="Aristolochia fimbriata" NCBITaxId="158543" taxonId="462"> <database name="Aristolochia fimbriata from Refseq" version="Refseq; ASM1984555v1; GCA_019845555.1; 02-SEP-2021; ASM1984555v1"> <genes> <gene id="22666218" protId="ARIFI19543"/> <gene id="22651142" protId="ARIFI04467"/> </genes> </database> </species> <species name="Phaseolus angularis" NCBITaxId="3914" taxonId="572"> <database name="Vigna angularis from Ensembl Plants 41" version="Ensembl Plants 41; Vigan1.1"> <genes> <gene id="23644771" protId="PHAAN07427"/> </genes> </database> </species> <species name="Coffea canephora" NCBITaxId="49390" taxonId="517"> <database name="Coffea canephora str. DH200-94 from Ensembl Plants 45" version="Ensembl Plants 45; AUK_PRJEB4211_v1"> <genes> <gene id="23123251" protId="COFCA10857"/> <gene id="23123603" protId="COFCA11209"/> </genes> </database> </species> <species name="Capsicum annuum" NCBITaxId="4072" taxonId="522"> <database name="Capsicum annuum from Ensembl Plants 45" version="Ensembl Plants 45; ASM51225v2"> <genes> <gene id="23291712" protId="CAPAN26858"/> <gene id="23271461" protId="CAPAN06607"/> </genes> </database> </species> <species name="Rosa chinensis" NCBITaxId="74649" taxonId="559"> <database name="Rosa chinensis from Ensembl Plants 50" version="Ensembl Plants 50; RchiOBHm-V2"> <genes> <gene id="23952448" protId="ROSCH13153"/> </genes> </database> </species> <species name="Arabidopsis lyrata" NCBITaxId="59689" taxonId="542"> <database name="Arabidopsis lyrata subsp. lyrata from Ensembl 37" version="Ensembl 37; v.1.0"> <genes> <gene id="24234789" protId="ARALY29769"/> <gene id="24234788" protId="ARALY29768"/> <gene id="24230321" protId="ARALY25301"/> </genes> </database> </species> <species name="Arabidopsis thaliana" NCBITaxId="3702" taxonId="543"> <database name="Arabidopsis thaliana from Ensembl Plants 38" version="Ensembl Plants 38; TAIR10"> <genes> <gene id="24276143" protId="ARATH38456"/> <gene id="24276142" protId="ARATH38455"/> <gene id="24267088" protId="ARATH29401"/> </genes> </database> </species> <species name="Eutrema salsugineum" NCBITaxId="72664" taxonId="541"> <database name="Eutrema salsugineum from Ensembl Plants 53" version="Ensembl Plants 53; Eutsalg1_0; GCA_000478725.1"> <genes> <gene id="24280969" protId="EUTSA02283"/> <gene id="24284012" protId="EUTSA05326"/> <gene id="24285817" protId="EUTSA07131"/> </genes> </database> </species> <species name="Marsilea vestita" NCBITaxId="59764" taxonId="440"> <database name="Marsilea vestita from Fernbase" version="Fernbase; v3"> <genes> <gene id="20824996" protId="MARVE06714"/> <gene id="20835833" protId="MARVE17551"/> <gene id="20833403" protId="MARVE15121"/> </genes> </database> </species> <species name="Diphasiastrum complanatum" NCBITaxId="34168" taxonId="436"> <database name="Diphasiastrum complanatum from Refseq" version="Refseq; Diphasiastrum complanatum v3.1; GCA_029204225.1; 21-MAR-2023"> <genes> <gene id="24694112" protId="DIPCM05659"/> <gene id="24697354" protId="DIPCM08901"/> </genes> </database> </species> <species name="Chenopodium quinoa" NCBITaxId="63459" taxonId="509"> <database name="Chenopodium quinoa from ChenopodiumDB" version=""> <genes> <gene id="22916918" protId="CHEQI38407"/> </genes> </database> </species> <species name="Oryza sativa subsp. japonica" NCBITaxId="39947" taxonId="499"> <database name="Oryza sativa from ENSEMBL plants v27" version="Ensembl Plants 27; IRGSP-1; 26-MAY-2015"> <genes> <gene id="21402429" protId="ORYSJ10958"/> </genes> </database> </species> <species name="Solanum tuberosum" NCBITaxId="4113" taxonId="524"> <database name="Solanum tuberosum from ENSEMBL plants v21" version="Ensembl Plants 21; 3.0; 6-DEC-2013"> <genes> <gene id="23349410" protId="SOLTU14282"/> <gene id="23355991" protId="SOLTU20863"/> </genes> </database> </species> <species name="Helianthus annuus" NCBITaxId="4232" taxonId="513"> <database name="Helianthus annuus from Ensembl Plants 39" version="Ensembl Plants 39; HanXRQr1.0"> <genes> <gene id="23057874" protId="HELAN24176"/> <gene id="23078362" protId="HELAN44664"/> </genes> </database> </species> <species name="Oryza rufipogon" NCBITaxId="4529" taxonId="497"> <database name="Oryza rufipogon from ENSEMBL plants v23" version="Ensembl Plants 23; PRJEB4137; 19-JUL-2014"> <genes> <gene id="21325113" protId="ORYRU12402"/> </genes> </database> </species> <species name="Brassica rapa subsp. pekinensis" NCBITaxId="51351" taxonId="545"> <database name="Brassica rapa subsp. pekinensis from Ensembl Plants 36" version="Ensembl Plants 36; IVFCAASv1"> <genes> <gene id="24013789" protId="BRARP05744"/> <gene id="24009862" protId="BRARP01817"/> <gene id="24021363" protId="BRARP13318"/> <gene id="24017751" protId="BRARP09706"/> </genes> </database> </species> <species name="Gossypium raimondii" NCBITaxId="29730" taxonId="537"> <database name="Gossypium raimondii from Ensembl Plants 38" version="Ensembl Plants 38; Graimondii2_0"> <genes> <gene id="24499475" protId="GOSRA20145"/> <gene id="24492113" protId="GOSRA12783"/> </genes> </database> </species> <species name="Eucalyptus grandis" NCBITaxId="71139" taxonId="531"> <database name="Eucalyptus grandis from Ensembl Plants 50" version="Ensembl Plants 50; Egrandis1_0"> <genes> <gene id="24590970" protId="EUCGR44820"/> </genes> </database> </species> <species name="Magnolia sinica" NCBITaxId="86752" taxonId="464"> <database name="Magnolia sinica from Refseq" version="Refseq; MsV1; GCF_029962835.1; 19-JUL-2023; GCF_029962835.1-RS_2023_07"> <genes> <gene id="22627789" protId="MAGSI29402"/> <gene id="22610904" protId="MAGSI12517"/> <gene id="22629782" protId="MAGSI31395"/> </genes> </database> </species> <species name="Nelumbo nucifera" NCBITaxId="4432" taxonId="455"> <database name="Nelumbo nucifera from Refseq" version="Refseq; Chinese Lotus 1.0; GCF_000365185.1; 16-NOV-2016"> <genes> <gene id="22696112" protId="NELNU27582"/> <gene id="22696792" protId="NELNU28262"/> <gene id="22701409" protId="NELNU32879"/> </genes> </database> </species> <species name="Medicago truncatula" NCBITaxId="3880" taxonId="566"> <database name="Medicago truncatula from ENSEMBL plants v18" version="Ensembl Plants 18; GCA_000219495.1; 8-APR-2013"> <genes> <gene id="23405307" protId="MEDTR04603"/> </genes> </database> </species> <species name="Erythranthe guttata" NCBITaxId="4155" taxonId="518"> <database name="Erythranthe guttata from Refseq" version="Refseq; Mimgu1_0; GCF_000504015.1; 24-JUN-2015"> <genes> <gene id="23169498" protId="ERYGU31530"/> </genes> </database> </species> <species name="Nicotiana tabacum" NCBITaxId="4097" taxonId="520"> <database name="Nicotiana tabacum from Refseq" version="Refseq; Ntab-TN90; GCF_000715135.1; 03-MAY-2016"> <genes> <gene id="23234633" protId="TOBAC43835"/> <gene id="23252881" protId="TOBAC62083"/> <gene id="23259187" protId="TOBAC68389"/> <gene id="23229804" protId="TOBAC39006"/> </genes> </database> </species> <species name="Populus trichocarpa" NCBITaxId="3694" taxonId="553"> <database name="Populus trichocarpa from Ensembl Plants 58" version="Ensembl Plants 58; Pop_tri_v4; GCA_000002775.4"> <genes> <gene id="23821979" protId="POPTR31359"/> <gene id="23803830" protId="POPTR13210"/> </genes> </database> </species> <species name="Brassica oleracea var. oleracea" NCBITaxId="109376" taxonId="547"> <database name="Brassica oleracea from ENSEMBL plants v23" version="Ensembl Plants 23; v2.1; 8-OCT-2014"> <genes> <gene id="24154317" protId="BRAOL07117"/> <gene id="24159836" protId="BRAOL12636"/> <gene id="24149375" protId="BRAOL02175"/> <gene id="24188347" protId="BRAOL41147"/> </genes> </database> </species> <species name="Klebsormidium nitens" NCBITaxId="105231" taxonId="431"> <database name="Klebsormidium nitens from Genbank" version="Genbank; ASM70883v1; GCA_000708835.1; 27-MAY-2017"> <genes> <gene id="20642013" protId="KLENI08338"/> <gene id="20644671" protId="KLENI10996"/> </genes> </database> </species> <species name="Brassica napus" NCBITaxId="3708" taxonId="546"> <database name="Brassica napus from Genoscope" version="Darmor-bzh; v5"> <genes> <gene id="24093707" protId="BRANA44637"/> <gene id="24060882" protId="BRANA11812"/> <gene id="24127578" protId="BRANA78508"/> <gene id="24053661" protId="BRANA04591"/> <gene id="24050679" protId="BRANA01609"/> <gene id="24097520" protId="BRANA48450"/> </genes> </database> </species> <species name="Gossypium arboreum" NCBITaxId="29729" taxonId="535"> <database name="Gossypium arboreum from Refseq" version="Refseq; Gossypium_arboreum_v1.0; GCF_000612285.1; 11-AUG-2016"> <genes> <gene id="24369692" protId="GOSAR02519"/> <gene id="24387265" protId="GOSAR20092"/> </genes> </database> </species> <species name="Papaver somniferum" NCBITaxId="3469" taxonId="459"> <database name="Papaver somniferum from Ensembl Plants 50" version="Ensembl Plants 50; ASM357369v1"> <genes> <gene id="22798210" protId="PAPSO22929"/> <gene id="22795907" protId="PAPSO20626"/> <gene id="22811263" protId="PAPSO35982"/> </genes> </database> </species> <species name="Gossypium hirsutum" NCBITaxId="3635" taxonId="536"> <database name="Gossypium hirsutum from " version="NAU-NBI v1.1"> <genes> <gene id="24415739" protId="GOSHI06887"/> <gene id="24453038" protId="GOSHI44186"/> <gene id="24475665" protId="GOSHI66813"/> </genes> </database> </species> <species name="Selaginella moellendorffii" NCBITaxId="88036" taxonId="437"> <database name="Selaginella moellendorffii from ENSEMBL plants v21" version="Ensembl Plants 21; v1.0; 4-DEC-2013"> <genes> <gene id="24771935" protId="SELML14440"/> <gene id="24763297" protId="SELML05802"/> </genes> </database> </species> <species name="Nicotiana attenuata" NCBITaxId="49451" taxonId="519"> <database name="Nicotiana attenuata str. UT from Ensembl Plants 38" version="Ensembl Plants 38; NIATTr2"> <genes> <gene id="23185106" protId="NICAT15277"/> <gene id="23171291" protId="NICAT01462"/> </genes> </database> </species> <species name="Ceratopteris richardii" NCBITaxId="49495" taxonId="439"> <database name="Ceratopteris richardii from Refseq" version="Refseq; C.richardii_v2; GCA_020310875.1; 05-NOV-2021"> <genes> <gene id="20746556" protId="CERRI03485"/> <gene id="20755588" protId="CERRI12517"/> <gene id="20750661" protId="CERRI07590"/> </genes> </database> </species> <species name="Triticum aestivum" NCBITaxId="4565" taxonId="485"> <database name="Triticum aestivum from Ensembl Plants 40" version="Ensembl Plants 40; IWGSC"> <genes> <gene id="21838233" protId="WHEAT98529"/> <gene id="21843558" protId="WHEAT103854"/> <gene id="21849261" protId="WHEAT109557"/> </genes> </database> </species> <species name="Oryza punctata" NCBITaxId="4537" taxonId="496"> <database name="Oryza punctata from ENSEMBL plants v23" version="Ensembl Plants 23; AVCL00000000; 19-JUL-2014"> <genes> <gene id="21307426" protId="ORYPU27076"/> </genes> </database> </species> <species name="Triticum turgidum subsp. durum" NCBITaxId="4567" taxonId="486"> <database name="Triticum turgidum from Ensembl Plants 53" version="Ensembl Plants 53; Svevo.v1; GCA_900231445.1"> <genes> <gene id="21892321" protId="TRITD15607"/> <gene id="21938666" protId="TRITD61952"/> </genes> </database> </species> <species name="Macadamia integrifolia" NCBITaxId="60698" taxonId="456"> <database name="Macadamia integrifolia from Refseq" version="Refseq; SCU_Mint_v3; GCF_013358625.1; 22-JUL-2021; Macadamia integrifolia Annotation Release 100"> <genes> <gene id="22740257" protId="MACIN33536"/> <gene id="22732610" protId="MACIN25889"/> <gene id="22736459" protId="MACIN29738"/> </genes> </database> </species> <groups> <orthologGroup taxonId="586" id="HOG:E0319628"> <property name="TaxRange" value="Streptophyta"/> <paralogGroup> <orthologGroup taxonId="432"> <property name="TaxRange" value="Klebsormidium"/> <geneRef id="20623722"/> <geneRef id="20642013"/> </orthologGroup> <orthologGroup taxonId="432"> <property name="TaxRange" value="Klebsormidium"/> <geneRef id="20626391"/> <geneRef id="20644671"/> </orthologGroup> </paralogGroup> <paralogGroup> <orthologGroup taxonId="584"> <property name="TaxRange" value="Embryophyta"/> <geneRef id="20710134"/> <geneRef id="20735800"/> <orthologGroup taxonId="583"> <property name="TaxRange" value="Tracheophyta"/> <orthologGroup taxonId="438"> <property name="TaxRange" value="Lycopodiopsida"/> <paralogGroup> <geneRef id="24694112"/> <geneRef id="24697354"/> </paralogGroup> <paralogGroup> <geneRef id="24763297"/> <geneRef id="24771935"/> </paralogGroup> </orthologGroup> <orthologGroup taxonId="582"> <property name="TaxRange" value="Euphyllophyta"/> <paralogGroup> <orthologGroup taxonId="441"> <property name="TaxRange" value="Polypodiidae"/> <geneRef id="20746556"/> <geneRef id="20835833"/> </orthologGroup> <geneRef id="20824996"/> <orthologGroup taxonId="441"> <property name="TaxRange" value="Polypodiidae"/> <paralogGroup> <geneRef id="20750661"/> <geneRef id="20755588"/> </paralogGroup> <geneRef id="20833403"/> </orthologGroup> </paralogGroup> <paralogGroup> <orthologGroup taxonId="581"> <property name="TaxRange" value="Spermatophyta"/> <paralogGroup> <orthologGroup taxonId="580"> <property name="TaxRange" value="Magnoliopsida"/> <geneRef id="21080393"/> <orthologGroup taxonId="579"> <property name="TaxRange" value="Mesangiospermae"/> <orthologGroup taxonId="457"> <property name="TaxRange" value="Proteales"/> <paralogGroup> <geneRef id="22696112"/> <geneRef id="22696792"/> </paralogGroup> <paralogGroup> <geneRef id="22740257"/> <geneRef id="22736459"/> </paralogGroup> </orthologGroup> <orthologGroup taxonId="460"> <property name="TaxRange" value="Papaveroideae"/> <geneRef id="22755193"/> <geneRef id="22795907"/> </orthologGroup> <orthologGroup taxonId="466"> <property name="TaxRange" value="Magnoliidae"/> <geneRef id="22531855"/> <geneRef id="22666218"/> <orthologGroup taxonId="465"> <property name="TaxRange" value="Magnoliales"/> <paralogGroup> <geneRef id="22573659"/> <geneRef id="22573664"/> </paralogGroup> <geneRef id="22629782"/> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> <geneRef id="22125291"/> <orthologGroup taxonId="528"> <property name="TaxRange" value="lamiids"/> <geneRef id="23123251"/> <orthologGroup taxonId="527"> <property name="TaxRange" value="Solanaceae"/> <orthologGroup taxonId="521"> <property name="TaxRange" value="Nicotiana"/> <paralogGroup> <geneRef id="23259187"/> <geneRef id="23229804"/> </paralogGroup> <geneRef id="23185106"/> </orthologGroup> <orthologGroup taxonId="525"> <property name="TaxRange" value="Solanum"/> <geneRef id="23307100"/> <geneRef id="23349410"/> </orthologGroup> </orthologGroup> </orthologGroup> <orthologGroup taxonId="557"> <property name="TaxRange" value="Malpighiales"/> <geneRef id="23821979"/> <geneRef id="23749466"/> </orthologGroup> </paralogGroup> <orthologGroup taxonId="451"> <property name="TaxRange" value="Acrogymnospermae"/> <paralogGroup> <geneRef id="20844678"/> <geneRef id="20844679"/> </paralogGroup> <paralogGroup> <geneRef id="20950862"/> <geneRef id="20965969"/> <geneRef id="20969928"/> </paralogGroup> </orthologGroup> </orthologGroup> <orthologGroup taxonId="515"> <property name="TaxRange" value="Asteraceae"/> <geneRef id="23078362"/> <geneRef id="23093467"/> </orthologGroup> <orthologGroup taxonId="549"> <property name="TaxRange" value="Brassicaceae"/> <geneRef id="24284012"/> <orthologGroup taxonId="544"> <property name="TaxRange" value="Arabidopsis"/> <geneRef id="24234789"/> <geneRef id="24276143"/> </orthologGroup> <orthologGroup taxonId="548"> <property name="TaxRange" value="Brassica"/> <geneRef id="24017751"/> <geneRef id="24159836"/> </orthologGroup> </orthologGroup> <orthologGroup taxonId="581"> <property name="TaxRange" value="Spermatophyta"/> <orthologGroup taxonId="451"> <property name="TaxRange" value="Acrogymnospermae"/> <geneRef id="20854414"/> <geneRef id="20883839"/> <orthologGroup taxonId="448"> <property name="TaxRange" value="Picea"/> <geneRef id="20905748"/> <geneRef id="20940112"/> </orthologGroup> </orthologGroup> <orthologGroup taxonId="580"> <property name="TaxRange" value="Magnoliopsida"/> <geneRef id="21096272"/> <geneRef id="24660836"/> <orthologGroup taxonId="579"> <property name="TaxRange" value="Mesangiospermae"/> <orthologGroup taxonId="457"> <property name="TaxRange" value="Proteales"/> <geneRef id="22701409"/> <geneRef id="22732610"/> </orthologGroup> <orthologGroup taxonId="460"> <property name="TaxRange" value="Papaveroideae"/> <paralogGroup> <geneRef id="22811263"/> <geneRef id="22798210"/> </paralogGroup> <geneRef id="22765124"/> </orthologGroup> <orthologGroup taxonId="466"> <property name="TaxRange" value="Magnoliidae"/> <geneRef id="22651142"/> <orthologGroup taxonId="465"> <property name="TaxRange" value="Magnoliales"/> <paralogGroup> <geneRef id="22627789"/> <geneRef id="22610904"/> </paralogGroup> <geneRef id="22559002"/> </orthologGroup> </orthologGroup> <orthologGroup taxonId="506"> <property name="TaxRange" value="Liliopsida"/> <geneRef id="21121122"/> <orthologGroup taxonId="505"> <property name="TaxRange" value="Petrosaviidae"/> <geneRef id="21145578"/> <orthologGroup taxonId="504"> <property name="TaxRange" value="commelinids"/> <geneRef id="22496209"/> <orthologGroup taxonId="503"> <property name="TaxRange" value="Poaceae"/> <paralogGroup> <orthologGroup taxonId="478"> <property name="TaxRange" value="Panicoideae"/> <orthologGroup taxonId="473"> <property name="TaxRange" value="Setaria"/> <geneRef id="22378904"/> <geneRef id="22418594"/> </orthologGroup> <orthologGroup taxonId="477"> <property name="TaxRange" value="Andropogoneae"/> <paralogGroup> <geneRef id="22182502"/> <geneRef id="22189838"/> </paralogGroup> <paralogGroup> <geneRef id="22332319"/> <geneRef id="22337449"/> </paralogGroup> <geneRef id="22258304"/> </orthologGroup> </orthologGroup> <geneRef id="22129983"/> </paralogGroup> <orthologGroup taxonId="502"> <property name="TaxRange" value="BOP clade"/> <orthologGroup taxonId="491"> <property name="TaxRange" value="Pooideae"/> <geneRef id="21439607"/> <orthologGroup taxonId="489"> <property name="TaxRange" value="Triticinae"/> <orthologGroup taxonId="484"> <property name="TaxRange" value="Aegilops tauschii"/> <geneRef id="21680021"/> <geneRef id="21723252"/> </orthologGroup> <orthologGroup taxonId="488"> <property name="TaxRange" value="Triticum"/> <paralogGroup> <geneRef id="21838233"/> <geneRef id="21849261"/> <geneRef id="21843558"/> </paralogGroup> <paralogGroup> <geneRef id="21892321"/> <geneRef id="21938666"/> </paralogGroup> <geneRef id="22095966"/> </orthologGroup> </orthologGroup> </orthologGroup> <orthologGroup taxonId="501"> <property name="TaxRange" value="Oryza"/> <geneRef id="21159395"/> <geneRef id="21190068"/> <geneRef id="21242247"/> <geneRef id="21254694"/> <geneRef id="21307426"/> <geneRef id="21325113"/> <orthologGroup taxonId="500"> <property name="TaxRange" value="Oryza sativa"/> <geneRef id="21362963"/> <geneRef id="21402429"/> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> <orthologGroup taxonId="578"> <property name="TaxRange" value="Pentapetalae"/> <paralogGroup> <geneRef id="22933611"/> <geneRef id="22934425"/> </paralogGroup> <orthologGroup taxonId="510"> <property name="TaxRange" value="Chenopodiaceae"/> <geneRef id="22875514"/> <geneRef id="22916918"/> </orthologGroup> <orthologGroup taxonId="529"> <property name="TaxRange" value="asterids"/> <geneRef id="22980608"/> <orthologGroup taxonId="516"> <property name="TaxRange" value="campanulids"/> <geneRef id="23005512"/> <orthologGroup taxonId="515"> <property name="TaxRange" value="Asteraceae"/> <geneRef id="23057874"/> <geneRef id="23091013"/> </orthologGroup> </orthologGroup> <orthologGroup taxonId="528"> <property name="TaxRange" value="lamiids"/> <geneRef id="23123603"/> <geneRef id="23169498"/> <orthologGroup taxonId="527"> <property name="TaxRange" value="Solanaceae"/> <orthologGroup taxonId="521"> <property name="TaxRange" value="Nicotiana"/> <paralogGroup> <geneRef id="23234633"/> <geneRef id="23252881"/> </paralogGroup> <geneRef id="23171291"/> </orthologGroup> <orthologGroup taxonId="526"> <property name="TaxRange" value="Solanoideae"/> <paralogGroup> <geneRef id="23291712"/> <geneRef id="23271461"/> </paralogGroup> <orthologGroup taxonId="525"> <property name="TaxRange" value="Solanum"/> <geneRef id="23317662"/> <geneRef id="23355991"/> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> <orthologGroup taxonId="577"> <property name="TaxRange" value="rosids"/> <geneRef id="24640938"/> <orthologGroup taxonId="550"> <property name="TaxRange" value="malvids"/> <paralogGroup> <orthologGroup taxonId="539"> <property name="TaxRange" value="Malvaceae"/> <geneRef id="24318627"/> <orthologGroup taxonId="538"> <property name="TaxRange" value="Gossypium"/> <geneRef id="24369692"/> <geneRef id="24453038"/> <geneRef id="24499475"/> </orthologGroup> </orthologGroup> <orthologGroup taxonId="538"> <property name="TaxRange" value="Gossypium"/> <paralogGroup> <geneRef id="24475665"/> <geneRef id="24415739"/> </paralogGroup> <geneRef id="24387265"/> <geneRef id="24492113"/> </orthologGroup> </paralogGroup> <paralogGroup> <orthologGroup taxonId="549"> <property name="TaxRange" value="Brassicaceae"/> <paralogGroup> <orthologGroup taxonId="548"> <property name="TaxRange" value="Brassica"/> <paralogGroup> <geneRef id="24060882"/> <geneRef id="24127578"/> </paralogGroup> <geneRef id="24021363"/> <geneRef id="24188347"/> </orthologGroup> <orthologGroup taxonId="548"> <property name="TaxRange" value="Brassica"/> <paralogGroup> <geneRef id="24093707"/> <geneRef id="24050679"/> </paralogGroup> <geneRef id="24009862"/> <geneRef id="24149375"/> </orthologGroup> </paralogGroup> <geneRef id="24280969"/> <orthologGroup taxonId="544"> <property name="TaxRange" value="Arabidopsis"/> <geneRef id="24230321"/> <geneRef id="24267088"/> </orthologGroup> </orthologGroup> <orthologGroup taxonId="549"> <property name="TaxRange" value="Brassicaceae"/> <geneRef id="24003750"/> <geneRef id="24285817"/> <orthologGroup taxonId="544"> <property name="TaxRange" value="Arabidopsis"/> <geneRef id="24234788"/> <geneRef id="24276142"/> </orthologGroup> <orthologGroup taxonId="548"> <property name="TaxRange" value="Brassica"/> <paralogGroup> <geneRef id="24053661"/> <geneRef id="24097520"/> </paralogGroup> <geneRef id="24013789"/> <geneRef id="24154317"/> </orthologGroup> </orthologGroup> </paralogGroup> <geneRef id="24590970"/> <geneRef id="24595317"/> </orthologGroup> <orthologGroup taxonId="576"> <property name="TaxRange" value="fabids"/> <geneRef id="23377460"/> <orthologGroup taxonId="557"> <property name="TaxRange" value="Malpighiales"/> <geneRef id="23803830"/> <geneRef id="23731251"/> </orthologGroup> <orthologGroup taxonId="563"> <property name="TaxRange" value="Rosaceae"/> <geneRef id="23952448"/> <orthologGroup taxonId="562"> <property name="TaxRange" value="Prunus"/> <geneRef id="23889539"/> <geneRef id="23914790"/> </orthologGroup> </orthologGroup> <orthologGroup taxonId="575"> <property name="TaxRange" value="50 kb inversion clade"/> <geneRef id="23681107"/> <orthologGroup taxonId="574"> <property name="TaxRange" value="NPAAA clade"/> <orthologGroup taxonId="568"> <property name="TaxRange" value="Hologalegina"/> <geneRef id="23405307"/> <geneRef id="23463865"/> </orthologGroup> <orthologGroup taxonId="573"> <property name="TaxRange" value="Phaseoleae"/> <paralogGroup> <geneRef id="23556949"/> <geneRef id="23604668"/> </paralogGroup> <geneRef id="23485301"/> <geneRef id="23622778"/> <geneRef id="23644771"/> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> </orthologGroup> <geneRef id="22976025"/> </paralogGroup> </orthologGroup> </orthologGroup> </orthologGroup> <geneRef id="20702404"/> </paralogGroup> </orthologGroup> </groups> </orthoXML>