Related genomes of genome FUSPO based on shared OMA groups

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

FUSPO - Fusarium poae

Proteome version: Ensembl Fungi 48; FPOA1.0 with 14740 proteins.

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Genome information
List genes
Related Species

Based on number of:

Shared OMA groups

Shared HOGs
Gene Order
Synteny

Species with most common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	GIBZA	Gibberella zeae	8978
2	FUSCU	Fusarium culmorum	8869
3	FUSC1	Fusarium oxysporum f. sp. cubense (strain race 1)	8559
4	FUSV7	Fusarium vanettenii (strain ATCC MYA-4622 / CBS 123669 / FGSC 9596 / NRRL 45880 / 77-13-4)	8232
5	NECHA	Nectria haematococca	8229
6	FUSO4	Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)	8007
7	GIBM7	Gibberella moniliformis (strain M3125 / FGSC 7600)	7616
8	COLGR	Colletotrichum graminicola	6414
9	HYPVG	Hypocrea virens (strain Gv29-8 / FGSC 10586)	6332
10	PESFW	Pestalotiopsis fici (strain W106-1 / CGMCC3.15140)	6329

Species with least common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	UC116	Patescibacteria group bacterium E44_bin74	32
2	ZINIC	Zinderia insecticola (strain CARI)	33
3	TRYVY	Trypanosoma vivax (strain Y486)	34
4	MYCHA	Mycoplasma haemolamae (strain Purdue)	35
5	MYCWM	Mycoplasma wenyonii (strain Massachusetts)	38
6	UC179	candidate division Kazan bacterium GW2011_GWA1_50_15 none	40
7	RALSL	Ralstonia solanacearum	41
8	MYCS3	Mycoplasma suis (strain KI_3806)	44
9	MYCHN	Mycoplasma haemocanis (strain Illinois)	45
10	MYCSL	Mycoplasma suis (strain Illinois)	46