Related genomes of genome CONC2 based on shared OMA groups

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

CONC2 - Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638)

Proteome version: Ensembl Fungi 51; Conidiobolus_coronatus_NRRL28638 with 10568 genes / 10572 proteins.

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Genome information
List genes
Related Species

Based on number of:

Shared OMA groups

Shared HOGs
Gene Order
Synteny

Species with most common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	MUCC1	Mucor circinelloides f. circinelloides (strain 1006PhL)	2103
2	MUCCI	Mucor circinelloides	2053
3	PHYBL	Phycomyces blakesleeanus	2021
4	SYNRA	Syncephalastrum racemosum	1952
5	ALLM3	Allomyces macrogynus (strain ATCC 38327)	1848
6	ABSGL	Absidia glauca	1846
7	RHIZD	Rhizopus microsporus	1845
8	SPIPN	Spizellomyces punctatus	1837
9	SPIPD	Spizellomyces punctatus (strain DAOM BR117)	1837
10	RHIO9	Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)	1819

Species with least common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	RALSL	Ralstonia solanacearum	17
2	UC116	Patescibacteria group bacterium E44_bin74	23
3	TRYVY	Trypanosoma vivax (strain Y486)	26
4	MYCHA	Mycoplasma haemolamae (strain Purdue)	27
5	MYCWM	Mycoplasma wenyonii (strain Massachusetts)	28
6	ZINIC	Zinderia insecticola (strain CARI)	34
7	MYCS3	Mycoplasma suis (strain KI_3806)	36
8	MYCSL	Mycoplasma suis (strain Illinois)	38
9	UC105	Patescibacteria group bacterium Baikal-deep-G193	39
10	UC179	candidate division Kazan bacterium GW2011_GWA1_50_15 none	40