Related genomes of genome BORT9 based on shared OMA groups

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

BORT9 - Borrelia turicatae (strain 91E135)

Proteome version: 12-MAY-2009 (Rel. 106, Last updated, Version 1) with 818 proteins.

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Genome information
List genes
Related Species

Based on number of:

Shared OMA groups

Shared HOGs
Gene Order
Synteny

Species with most common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	BORHD	Borrelia hermsii (strain HS1 / DAH)	773
2	BORDL	Borrelia duttonii (strain Ly)	753
3	BORRA	Borrelia recurrentis (strain A1)	738
4	BORCA	Borrelia crocidurae (strain Achema)	716
5	BORAP	Borreliella afzelii (strain PKo)	714
6	BORBU	Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)	712
7	BORGP	Borrelia garinii subsp. bavariensis (strain ATCC BAA-2496 / DSM 23469 / PBi)	711
8	BORBN	Borreliella burgdorferi (strain N40)	709
9	BORBZ	Borreliella burgdorferi (strain ZS7)	703
10	SEDSS	Sediminispirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228)	459

Species with least common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	TRYVY	Trypanosoma vivax (strain Y486)	5
2	TRYCI	Trypanosoma congolense (strain IL3000)	11
3	MONPE	Moniliophthora perniciosa (strain FA553 / isolate CP02)	12
4	NEMP3	Nematocida parisii (strain ERTm3)	17
5	VITCO	Vittaforma corneae (strain ATCC 50505)	17
6	MEGSC	Megaselia scalaris	18
7	NANGC	Nannochloropsis gaditana (strain CCMP526)	19
8	EIMMA	Eimeria maxima	20
9	EDHAE	Edhazardia aedis (strain USNM 41457)	20
10	NANST	Nanobsidianus stetteri	20