Related genomes of genome AJECN based on shared OMA groups

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

AJECN - Ajellomyces capsulatus (strain NAm1 / WU24)

Proteome version: Ensembl Fungi 48; ASM14958v1 with 9313 proteins.

‹

Genome information
List genes
Related Species

Based on number of:

Shared OMA groups

Shared HOGs
Gene Order
Synteny

Species with most common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	AJEC8	Ajellomyces capsulatus (strain H88)	4545
2	AJEDR	Ajellomyces dermatitidis (strain ER-3 / ATCC MYA-2586)	4074
3	PARBA	Paracoccidioides lutzii (strain ATCC MYA-826 / Pb01)	3992
4	AJECH	Ajellomyces capsulatus (strain H143)	3949
5	PARBD	Paracoccidioides brasiliensis (strain Pb18)	3942
6	COCIM	Coccidioides immitis (strain RS)	3813
7	COCPS	Coccidioides posadasii (strain RMSCC 757 / Silveira)	3654
8	ASPCI	Aspergillus calidoustus	3645
9	NEOFI	Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181)	3636
10	ARTGP	Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893)	3626

Species with least common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	UC116	Patescibacteria group bacterium E44_bin74	17
2	MYCHA	Mycoplasma haemolamae (strain Purdue)	26
3	TRYVY	Trypanosoma vivax (strain Y486)	27
4	MYCWM	Mycoplasma wenyonii (strain Massachusetts)	27
5	RALSL	Ralstonia solanacearum	29
6	UC105	Patescibacteria group bacterium Baikal-deep-G193	30
7	ZINIC	Zinderia insecticola (strain CARI)	31
8	MYCS3	Mycoplasma suis (strain KI_3806)	31
9	UC148	bacterium (Candidatus Torokbacteria) CG_4_10_14_0_2_um_filter_35_8	32
10	MYCSL	Mycoplasma suis (strain Illinois)	32