OMA Group 672394 ?

dna ligase


This group has 354 members: A81 B273

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TaxonProtein IDCross referenceFunction annotation
AArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)ARCFU00608UniProtKB/Swiss-Prot DNLI_ARCFUDNA ligase
AArchaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18)ARCPA00534UniProtKB/TrEMBL D2RH37DNA ligase
AArchaeoglobus veneficus (strain DSM 11195 / SNP6)ARCVS00550UniProtKB/TrEMBL F2KQN9DNA ligase COGs: COG1793 ATP-dependent DNA ligase; HAMAP: DNA ligase, ATP-dependent, bacterial/archaeal; InterProIPR022865: IPR000977: IPR012308: IPR012310: IPR 012309; KEGG: fpl:Ferp_0025 DNA ligase I, ATP-dependent Dnl1; PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal; PRIAM: DNA ligase (ATP); SPTR: DNA ligase; TIGRFAM: DNA ligase, ATP-dependent; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1) pmp logo
AFerroglobus placidus (strain DSM 10642 / AEDII12DO)FERPA00025UniProtKB/TrEMBL D3S0Y1DNA ligase pmp logo
AHaloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755)HALHT01149UniProtKB/TrEMBL G0HXQ6DNA ligase
AHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)HALMA00405UniProtKB/Swiss-Prot DNLI_HALMADNA ligase
AHalomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541)HALMD02673UniProtKB/TrEMBL C7NZR1DNA ligase I, ATP-dependent Dnl1
ANatronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11)NATM801802UniProtKB/TrEMBL M1XRX6DNA ligase (ATP)
ANatronomonas pharaonis (strain ATCC 35678 / DSM 2160 / CIP 103997 / NBRC 14720 / NCIMB 2260 / Gabara)NATPD01696UniProtKB/Swiss-Prot DNLI_NATPDDNA ligase (ATP)
AHalobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)HALS300706UniProtKB/Swiss-Prot DNLI_HALS3DNA ligase
AHalobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)HALSA00672UniProtKB/Swiss-Prot DNLI_HALSADNA ligase Lig
AHaloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)HALMT01585UniProtKB/TrEMBL I3R521DNA ligase (ATP)
AHaloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)HALVD01531UniProtKB/Swiss-Prot DNLI_HALVD
AHalogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3)HALBP01617UniProtKB/TrEMBL E4NLM9ATP-dependent DNA ligase I PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
AHaloquadratum walsbyi (strain DSM 16790 / HBSQ001)HALWD01725UniProtKB/Swiss-Prot DNLI2_HALWDDNA ligase (ATP)
AHaloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23)HALWC01791UniProtKB/TrEMBL G0LLH9DNA ligase (ATP)
AHalorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)HALLT00866UniProtKB/Swiss-Prot DNLI_HALLTDNA ligase
AHalopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6)HALXS01999UniProtKB/TrEMBL F8D907DNA ligase PFAM: DNA ligase, N-terminal; ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; TIGRFAM: ATP-dependent DNA ligase; HAMAP: DNA ligase; KEGG: htu:Htur_1898 DNA ligase I, ATP-dependent Dnl1
AHaloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734)HALTV01882UniProtKB/TrEMBL D2RSK7DNA ligase
ANatrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1)NATA100673UniProtKB/TrEMBL M0AWB1 -
ANatrialba magadii (strain ATCC 43099 / DSM 3394 / CIP 104546 / JCM 8861/ NBRC 102185 / NCIMB 2190 / MS3)NATMM00594UniProtKB/TrEMBL D3SYT3DNA ligase
ANatrinema pellirubrum (strain DSM 15624 / CIP 106293 / JCM 10476 / NCIMB 786 / 157)NATP102069UniProtKB/TrEMBL L0JKI4ATP-dependent DNA ligase I PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
ANatrinema sp. (strain J7-2)NATSJ00753UniProtKB/TrEMBL I7BT72DNA ligase I, ATP-dependent Dnl1
ANatronobacterium gregoryi (strain ATCC 43098 / DSM 3393 / CCM 3738 / CIP 104747 / JCM 8860 / NBRC 102187 / NCIMB 2189 / SP2)NATGS00301UniProtKB/TrEMBL L0AEL7ATP-dependent DNA ligase I PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
AMethanobacterium lacus (strain AL-21)METLA02423UniProtKB/TrEMBL F0T742DNA ligase PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal; TIGRFAM: DNA ligase, ATP-dependent; HAMAP: DNA ligase, ATP-dependent, bacterial/archaeal; KEGG: mth:MTH1580 DNA ligase pmp logo
AMethanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1)METPW00173UniProtKB/TrEMBL F6D1J3DNA ligase PFAM: DNA ligase, N-terminal; ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; TIGRFAM: ATP-dependent DNA ligase; HAMAP: DNA ligase; KEGG: mth:MTH1580 DNA ligase pmp logo
AMethanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / OCM 146 / M1)METRM00438UniProtKB/TrEMBL D3E0Q0DNA ligase pmp logo
AMethanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)METS300637UniProtKB/Swiss-Prot DNLI_METS3ATP-dependent DNA ligase, Cdc9
AMethanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg)METTM00163UniProtKB/TrEMBL D9PU77DNA ligase pmp logo
AMethanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)METTH01542UniProtKB/Swiss-Prot DNLI_METTHDNA ligase
AMethanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S)METFV00500UniProtKB/TrEMBL E3GYC3DNA ligase I, ATP-dependent Dnl1 COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310: IPR016059: IPR000977: IPR012308: IPR 012309: IPR012340; KEGG: mth:MTH1580 DNA ligase; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein; SPTR: Q50566 DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1) pmp logo
AMethanocaldococcus fervens (strain DSM 4213 / JCM 15782 / AG86)METFA00722UniProtKB/TrEMBL C7P7N2DNA ligase I, ATP-dependent Dnl1
AMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)METIM00792UniProtKB/TrEMBL D5VSB3DNA ligase
AMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)METJA00174UniProtKB/Swiss-Prot DNLI_METJADNA ligase
AMethanocaldococcus sp. (strain FS406-22)METSF00100UniProtKB/TrEMBL D3S6Z1DNA ligase
AMethanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7)METVM01641UniProtKB/TrEMBL C9RDY7DNA ligase I, ATP-dependent Dnl1
AMethanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5)METIK00306UniProtKB/TrEMBL F6BAQ8DNA ligase PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal; TIGRFAM: DNA ligase, ATP-dependent; HAMAP: DNA ligase, ATP-dependent, bacterial/archaeal; KEGG: mfs:MFS40622_0101 DNA ligase I, ATP-dependent Dnl1 pmp logo
AMethanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)META300853UniProtKB/Swiss-Prot DNLI_META3DNA ligase I, ATP-dependent Dnl1
AMethanococcus maripaludisMETMI01107UniProtKB/TrEMBL G0H0B9DNA ligase I, ATP-dependent Dnl1 COG1793 ATP-dependent DNA ligase
AMethanococcus maripaludis (strain C5 / ATCC BAA-1333)METM500785UniProtKB/Swiss-Prot DNLI_METM5DNA ligase I, ATP-dependent Dnl1
AMethanococcus maripaludis (strain C6 / ATCC BAA-1332)METM601670UniProtKB/Swiss-Prot DNLI_METM6DNA ligase I, ATP-dependent Dnl1
AMethanococcus maripaludis (strain C7 / ATCC BAA-1331)METM700212UniProtKB/Swiss-Prot DNLI_METM7DNA ligase I, ATP-dependent Dnl1
AMethanococcus maripaludis (strain S2 / LL)METMP00970UniProtKB/Swiss-Prot DNLI_METMPDNA ligase
AMethanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)METVS00284UniProtKB/Swiss-Prot DNLI_METVSDNA ligase I, ATP-dependent Dnl1
AMethanococcus voltae (strain ATCC BAA-1334 / A3)METV300135UniProtKB/TrEMBL D7DRU5DNA ligase pmp logo
AMethanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1)METOI01239UniProtKB/TrEMBL F8ALL2DNA ligase PFAM: ATP dependent DNA ligase, central; DNA ligase, N-terminal; ATP dependent DNA ligase, C-terminal; TIGRFAM: ATP-dependent DNA ligase; HAMAP: DNA ligase; KEGG: mae:Maeo_0864 DNA ligase I, ATP-dependent Dnl1 pmp logo
AMethanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)METAR00290UniProtKB/Swiss-Prot DNLI_METARATP-dependent DNA ligase
AMethanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE)METPS00610UniProtKB/TrEMBL D1YW63DNA ligase pmp logo
AMethanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)METLZ00616UniProtKB/Swiss-Prot DNLI_METLZHypothetical protein
AMethanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2)METBM00513UniProtKB/TrEMBL I7LLJ8DNA ligase 1 DNA ligase, ATP-dependent, bacterial/archaeal, ATP dependent DNA ligase domain; High confidence in function and specificity
AMethanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)METMJ01841UniProtKB/Swiss-Prot DNLI_METMJDNA ligase I, ATP-dependent Dnl1
AMethanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847)METP402364UniProtKB/TrEMBL E1RDW0DNA ligase
AMethanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8)METB602146UniProtKB/Swiss-Prot DNLI_METB6DNA ligase I, ATP-dependent Dnl1
AMethanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP)METFS00576UniProtKB/TrEMBL L0HF16ATP-dependent DNA ligase I PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
AMethanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)METPE02640UniProtKB/Swiss-Prot DNLI_METPEDNA ligase I, ATP-dependent Dnl1
AMethanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1)METHJ02751UniProtKB/Swiss-Prot DNLI_METHJDNA ligase I, ATP-dependent (dnl1)
AMethanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6)METCG00640UniProtKB/TrEMBL F4BY86DNA ligase GO_function: GO:0003910 - DNA ligase (ATP) activity pmp logo
AMethanosaeta harundinacea (strain 6Ac)METH601451UniProtKB/TrEMBL G7WP10DNA ligase pmp logo
AMethanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT)METTP00824UniProtKB/Swiss-Prot DNLI_METTPDNA ligase I, ATP-dependent Dnl1 KEGG: mbu:Mbur_1088 DNA ligase I, ATP-dependent (dnl1) TIGRFAM: DNA ligase I, ATP-dependent Dnl1 PFAM: DNA ligase domain protein; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase
AMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)METBU00975UniProtKB/Swiss-Prot DNLI_METBUDNA ligase I, ATP-dependent
AMethanohalobium evestigatum (strain ATCC BAA-1072 / DSM 3721 / NBRC 107634 / OCM 161 / Z-7303)METEZ00852UniProtKB/TrEMBL D7E8W6DNA ligase pmp logo
AMethanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP)METMS00555UniProtKB/TrEMBL D5EA92DNA ligase 1 pmp logo
AMethanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1)METHD01571UniProtKB/TrEMBL L0L0V2ATP-dependent DNA ligase I TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
AMethanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5)METZD00844UniProtKB/TrEMBL F7XL21DNA ligase I, ATP-dependent Dnl1 COGs: COG1793 ATP-dependent DNA ligase; InterProIPR012308:IPR012310:IPR012309:IPR012340:IPR 000977; KEGG: mbu:Mbur_1088 DNA ligase I, ATP-dependent (dnl1); PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein; PRIAM: DNA ligase (ATP); SPTR: Q12X08 DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1) pmp logo
AMethanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)METAC02454UniProtKB/Swiss-Prot DNLI2_METACDNA ligase 2
AMethanosarcina barkeri (strain Fusaro / DSM 804)METBF01834UniProtKB/Swiss-Prot DNLI2_METBFDNA ligase (ATP)
AMethanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)METMA02654UniProtKB/Swiss-Prot DNLI2_METMADNA ligase 2
AMethanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)METKA00998UniProtKB/Swiss-Prot DNLI_METKADNA ligase
APyrococcus abyssi (strain GE5 / Orsay)PYRAB00544UniProtKB/Swiss-Prot DNLI_PYRABDNA ligase
APyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)PYRFU01623UniProtKB/Swiss-Prot DNLI_PYRFUDNA ligase
APyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)PYRHO01679UniProtKB/Swiss-Prot DNLI_PYRHOProbable thermostable DNA ligase
APyrococcus sp. (strain NA2)PYRSN00205UniProtKB/TrEMBL F4HIS4ATP-dependent DNA ligase pmp logo
APyrococcus yayanosii (strain CH1 / JCM 16557)PYRYC00346UniProtKB/TrEMBL F8AH01ATP-dependent DNA ligase pmp logo
AThermococcus barophilus (strain DSM 11836 / MP)THEBM01952UniProtKB/TrEMBL F0LL23ATP-dependent DNA ligase pmp logo
AThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)THEGJ01719UniProtKB/TrEMBL C5A7K8ATP-dependent DNA ligase
AThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)THEKO02137UniProtKB/Swiss-Prot Q9HHC4ATP-dependent DNA ligase
AThermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)THELN02256UniProtKB/TrEMBL H3ZN22DNA ligase Derived by automated computational analysis using gene prediction method: GeneMarkS+. pmp logo
AThermococcus onnurineus (strain NA1)THEON01522UniProtKB/Swiss-Prot DNLI_THEONThermostable DNA ligase
AThermococcus sibiricus (strain MM 739 / DSM 12597)THESM00872UniProtKB/TrEMBL C6A2U9DNA ligase pmp logo
AThermococcus sp. (strain CGMCC 1.5172 / 4557)THES401571UniProtKB/TrEMBL G0HLK1ATP-dependent DNA ligase COG1793 ATP-dependent DNA ligase pmp logo
ANanoarchaeum equitans (strain Kin4-M)NANEQ00495UniProtKB/Swiss-Prot DNLI_NANEQDNA ligase
BSolibacter usitatus (strain Ellin6076)SOLUE03485UniProtKB/TrEMBL Q020V4ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase KEGG: bxe:Bxe_B1315 DNA ligase (ATP) pmp logo
BThermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51)THEBD02404UniProtKB/TrEMBL D6Y4G5DNA ligase I, ATP-dependent Dnl1 TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA ligase domain protein; KEGG: acp:A2cp1_4312 DNA ligase I, ATP-dependent Dnl1
BCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)CATAD01392UniProtKB/TrEMBL C7Q8T3DNA ligase
BGordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667)GORB400085UniProtKB/TrEMBL D0LAB8Probable DNA ligase
BGordonia polyisoprenivorans (strain DSM 44266 / VH2)GORPV00271UniProtKB/TrEMBL H6MS94DNA ligase Lig pmp logo
BHoyosella subflava (strain DSM 45089 / JCM 17490 / NBRC 109087 / DQS3-9A1)HOYSD02734UniProtKB/TrEMBL F6EI88putative DNA ligase pmp logo
BMycobacterium asiaticumMYCAS04687UniProtKB/TrEMBL A0A1A3MW56 -
BMycobacterium avium (strain 104)MYCA103714UniProtKB/Swiss-Prot DNLI_MYCA1DNA ligase identified by match to protein family HMM PF01068; match to protein family HMM PF04675; match to protein family HMM PF04679; match to protein family HMM TIGR00574
BMycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)MYCPA03087UniProtKB/Swiss-Prot DNLI_MYCPAProbable DNA ligase
BMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)MYCIA03754UniProtKB/TrEMBL H8IKB3ATP-dependent DNA ligase
BMycobacterium chubuense (strain NBB4)MYCCN01718UniProtKB/TrEMBL I4BGZ8ATP-dependent DNA ligase I PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
BMycobacterium gilvum (strain DSM 45189 / LMG 24558 / Spyr1)MYCSR03463UniProtKB/TrEMBL E6TJC9
BMycobacterium gilvum (strain PYR-GCK)MYCGI04219UniProtKB/Swiss-Prot DNLI_MYCGIDNA ligase I, ATP-dependent Dnl1 KEGG: mva:Mvan_2025 DNA ligase I, ATP-dependent Dnl1 TIGRFAM: DNA ligase I, ATP-dependent Dnl1 PFAM: DNA ligase domain protein; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase
BMycobacterium marinum (strain ATCC BAA-535 / M)MYCMM01586ncbi logo ACC40073.1ATP-dependent DNA ligase LigB
BMycobacterium rhodesiae (strain NBB3)MYCRN05786UniProtKB/TrEMBL G8RRH7ATP-dependent DNA ligase I PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
BMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)MYCS202123UniProtKB/Swiss-Prot DNLI_MYCS2DNA ligase I, ATP-dependent
BMycobacterium sp. (strain JLS)MYCSJ01739UniProtKB/Swiss-Prot DNLI_MYCSJDNA ligase I, ATP-dependent Dnl1 KEGG: mmc:Mmcs_1799 DNA ligase I, ATP-dependent (dnl1) TIGRFAM: DNA ligase I, ATP-dependent Dnl1 PFAM: DNA ligase domain protein; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase
BMycobacterium sp. (strain KMS)MYCSK01782UniProtKB/Swiss-Prot DNLI_MYCSKDNA ligase I, ATP-dependent Dnl1 KEGG: mmc:Mmcs_1799 DNA ligase I, ATP-dependent (dnl1) TIGRFAM: DNA ligase I, ATP-dependent Dnl1 PFAM: DNA ligase domain protein; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase
BMycobacterium sp. (strain MCS)MYCSS01767UniProtKB/Swiss-Prot DNLI_MYCSSDNA ligase I, ATP-dependent
BMycobacterium africanum (strain GM041182)MYCA003050UniProtKB/TrEMBL F8M5J5putative ATP-dependent DNA ligase LIGB (polydeoxyribonucleotide synthase [ATP])
BMycobacterium bovis (strain ATCC BAA-935 / AF2122/97)MYCBO00830UniProtKB/Swiss-Prot DNLI_MYCBOPROBABLE DNA LIGASE LIGB (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [ATP]) (POLYNUCLEOTIDE LIGASE [ATP]) (SEALASE) (DNA REPAIR PROTEIN) (DNA JOINASE) Mb3089, ligB, len: 507 aa. Equivalent to Rv3062, len: 507 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 507 aa overlap). Probable ligB, DNA ligase ATP-dependent (EC 6.5.1.1), highly similar to numerous archaebacterial and eukaryotic polynucleotide DNA ligases, e.g. Q9FCB1|DNLI_STRCO|LIG|2SCG58.02 from Streptomyces coelicolor (512 aa), FASTA scores: opt: 1677, E(): 2.5e-90, (55.65% identity in 512 aa overlap); Q9HR35|DNLI_HALN1|LIG|VNG0881G from Halobacterium sp. strain NRC-1 (561 aa), FASTA scores: opt: 985, E(): 5.6e-50, (42.25% identity in 440 aa overlap); Q9V185|DNLI_PYRAB|LIG|PAB2002 from Pyrococcus abyssi (559 aa), FASTA scores: opt: 978, E(): 1.4e-49, (39.05% identity in 443 aa overlap); etc. Also similar to Rv3731|MTV025.079|LIGC POSSIBLE DNA LIGASE from M. tuberculosis (358 aa). Similarity at N-terminus is poor so first start codon was taken. Contains (PS00697) ATP-dependent DNA ligase AMP-binding site signature, and (PS00017) ATP/GTP-binding site motif A (P-loop). BELONGS TO THE ATP-DEPENDENT DNA LIGASE FAMILY.
BMycobacterium bovis (strain BCG / Pasteur 1173P2)MYCBP03060UniProtKB/Swiss-Prot DNLI_MYCBPProbable dna ligase ligB
BMycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)MYCBT03064UniProtKB/Swiss-Prot DNLI_MYCBTProbable DNA ligase
BMycobacterium canettii (strain CIPT 140010059)MYCCP03055UniProtKB/TrEMBL G0TGR2putative ATP-dependent DNA ligase LIGB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase)
BMycobacterium tuberculosis (strain ATCC 25177 / H37Ra)MYCTA03122UniProtKB/Swiss-Prot DNLI_MYCTAATP-dependent DNA ligase LigB
BMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)MYCTU03083UniProtKB/Swiss-Prot DNLI_MYCTUProbable DNA ligase pmp logo
BMycobacterium tuberculosis (strain CCDC5079)MYCTC02797ncbi logo AEJ48008.1ATP-dependent DNA ligase
BMycobacterium tuberculosis (strain CCDC5180)MYCTD02754ncbi logo AEJ51620.1ATP-dependent DNA ligase
BMycobacterium tuberculosis (strain F11)MYCTF02995ncbi logo EAX14901.1ATP-dependent DNA ligase ligB Mapped to H37Rv Rv3062
BMycobacterium tuberculosis (strain KZN 1435 / MDR)MYCTK00919ncbi logo ACT23944.1Probable DNA ligase
BMycobacterium ulcerans (strain Agy99)MYCUA02776UniProtKB/Swiss-Prot DNLI_MYCUAATP-dependent DNA ligase LigB cytoplasmic protein this protein seals during DNA replication, DNA recombination and DNA repair nicks in double-stranded DNA [catalytic activity: ATP + (deoxyribonucleotide)(N) + (deoxyribonucleotide)(M) = AMP + pyrophosphate + (deoxyribonucleotide)(N+M)]
BMycobacterium vanbaalenii (strain DSM 7251 / PYR-1)MYCVP01940UniProtKB/Swiss-Prot DNLI_MYCVPDNA ligase I, ATP-dependent Dnl1 KEGG: mmc:Mmcs_1799 DNA ligase I, ATP-dependent (dnl1) TIGRFAM: DNA ligase I, ATP-dependent Dnl1 PFAM: DNA ligase domain protein; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase
BNocardia cyriacigeorgica (strain GUH-2)NOCCG04980UniProtKB/TrEMBL H6R495ATP-dependent DNA ligase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme pmp logo
BNocardia farcinica (strain IFM 10152)NOCFA05271UniProtKB/Swiss-Prot DNLI_NOCFAProbable DNA ligase
BRhodococcus jostii (strain RHA1)RHOJR01606UniProtKB/Swiss-Prot DNLI_RHOJRDNA ligase
BRhodococcus opacus (strain B4)RHOOB01343UniProtKB/Swiss-Prot DNLI_RHOOBATP-dependent DNA ligase LigB
BTsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040)TSUPD03668UniProtKB/TrEMBL D5UYT4DNA ligase I, ATP-dependent Dnl1 KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein
BBlastococcus saxobsidens (strain DD2)BLASD02720UniProtKB/TrEMBL H6RLM3ATP-dependent DNA ligase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 18680457; Product type e : enzyme
BGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)GEOOG02199UniProtKB/TrEMBL D2SH28DNA ligase
BModestobacter marinus (strain BC501)MODMB02236ncbi logo CCH87715.1ATP-dependent DNA ligase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 18680457; Product type e : enzyme
BKineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD04279UniProtKB/Swiss-Prot DNLI_KINRDDNA ligase I, ATP-dependent Dnl1
BBeutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)BEUC100271UniProtKB/Swiss-Prot DNLI_BEUC1Probable DNA ligase
BCellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)CELFA01745UniProtKB/TrEMBL F4GYB0DNA ligase I, ATP-dependent Dnl1 TIGRFAM: DNA ligase I, ATP-dependent Dnl1; KEGG: bcv:Bcav_0272 DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein
BCellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134)CELFN00919UniProtKB/TrEMBL D5UKM3DNA ligase I, ATP-dependent Dnl1 KEGG: bcv:Bcav_0272 DNA ligase I, ATP-dependent Dnl1; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA ligase domain protein
BCellulomonas gilvus (strain ATCC 13127 / NRRL B-14078)CELGA01836UniProtKB/TrEMBL F8A7H9DNA ligase I, ATP-dependent Dnl1 TIGRFAM: DNA ligase I, ATP-dependent Dnl1; KEGG: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein
BMicrobacterium testaceum (strain StLB037)MICTS02896UniProtKB/TrEMBL E8NA35ATP-dependent DNA ligase
BPseudarthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6)PSECP02552UniProtKB/Swiss-Prot DNLI_PSECPDNA ligase
BPseudarthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)PSEPM02591UniProtKB/TrEMBL F0M945ATP-dependent DNA ligase I PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1) pmp logo
BXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)XYLCX02615UniProtKB/TrEMBL D1BX88DNA ligase I, ATP-dependent Dnl1 KEGG: acp:A2cp1_4312 DNA ligase I, ATP-dependent Dnl1; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA ligase domain protein
BActinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431)ACTM401078UniProtKB/TrEMBL I0GZW3putative DNA ligase
BActinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)ACTS501181UniProtKB/TrEMBL G8S1T4ATP-dependent DNA ligase
BMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / BCRC 12538 / CBS 129.76 / JCM 10878 / NBRC 16125 / NRRL B-16091 / INA 9442)MICAI04888UniProtKB/TrEMBL D9TAL9Probable DNA ligase
BMicromonospora sp. (strain L5)MICSL03271ncbi logo ADU08844.1
BVerrucosispora maris (strain AB-18-032)VERMA04808UniProtKB/TrEMBL F4F695ATP-dependent DNA ligase COG1793 ATP-dependent DNA ligase
BNakamurella multipartita (strain ATCC 700099 / DSM 44233 / CIP 104796 / JCM 9543 / NBRC 105858 / Y-104)NAKMY04310UniProtKB/TrEMBL C8X6W7DNA ligase
BKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)KRIFD03331UniProtKB/TrEMBL D2PKZ8Probable DNA ligase
BNocardioides sp. (strain ATCC BAA-499 / JS614)NOCSJ02780UniProtKB/Swiss-Prot DNLI_NOCSJDNA ligase I, ATP-dependent Dnl1
BMicrolunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1)MICPN01170UniProtKB/TrEMBL F5XNS9ATP-dependent DNA ligase
BActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)ACTMD00706UniProtKB/TrEMBL C6WKS7DNA ligase
BAmycolatopsis mediterranei (strain S699)AMYMS08919UniProtKB/TrEMBL G0FNS9ATP-dependent DNA ligase
BAmycolatopsis mediterranei (strain U-32)AMYMU07916UniProtKB/TrEMBL A0A0H3DHV3ATP-dependent DNA ligase
BPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)PSEUX00909UniProtKB/TrEMBL F4CIY8DNA ligase PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal; TIGRFAM: DNA ligase, ATP-dependent; HAMAP: DNA ligase, ATP-dependent, bacterial/archaeal; KEGG: gob:Gobs_2344 DNA ligase I, ATP-dependent Dnl1
BSaccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)SACEN00880UniProtKB/Swiss-Prot DNLI_SACENDNA ligase I, ATP-dependent
BSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)SACES00796UniProtKB/TrEMBL K0JP19putative DNA ligase
BStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)STRAW07133UniProtKB/Swiss-Prot DNLI_STRAWProbable DNA ligase
BStreptomyces bingchenggensis (strain BCW-1)STRBB05482UniProtKB/TrEMBL D7CAP1Probable DNA ligase
BStreptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)STREN00178ncbi logo CCB73404.1putative DNA ligase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
BStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)STRCO00059UniProtKB/Swiss-Prot DNLI_STRCOputative DNA ligase 2SCG58.02, possible DNA ligase, len: 512 aa; similar to SW:DNLI_PYRFU Pyrococcus furiosus thermostable DNA ligase (EC 6.5.1.1) Lig, 561 aa; fasta scores: opt: 922 z-score: 971.8 E(): 0; 35.5% identity in 437 aa overlap. Contains Pfam match to entry PF01068 DNA_ligase, DNA ligase and match to Prosite entry PS00697 ATP-dependent DNA ligase AMP-binding site
BStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG06193UniProtKB/Swiss-Prot DNLI_STRGGPutative DNA ligase
BStreptomyces hygroscopicus subsp. jinggangensis (strain 5008)STRHJ02574UniProtKB/TrEMBL H2K393ATP-dependent DNA ligase pmp logo
BStreptomyces pratensis (strain ATCC 33331 / IAF-45CD)STRFA05543UniProtKB/TrEMBL E8WDE5DNA ligase I, ATP-dependent Dnl1 TIGRFAM: DNA ligase I, ATP-dependent Dnl1; KEGG: sgr:SGR_6320 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein
BStreptomyces scabiei (strain 87.22)STRSW07556UniProtKB/TrEMBL C9ZCP3Putative DNA ligase pmp logo
BStreptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)STRVP07262UniProtKB/TrEMBL F2R1P4ATP-dependent DNA ligase
BStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)STRRD06790UniProtKB/TrEMBL D2BAP0DNA ligase pmp logo
BChitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)CHIPD06736UniProtKB/TrEMBL C7PQ20ATP dependent DNA ligase pmp logo
BNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)NIAKG04900UniProtKB/TrEMBL G8T9W3ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310:IPR012309; KEGG: cpi:Cpin_6857 ATP dependent DNA ligase; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; SPTR: ATP dependent DNA ligase pmp logo
BBelliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134)BELBD02735UniProtKB/TrEMBL I3Z8A8ATP-dependent DNA ligase PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1); DNA ligase, ATP-dependent, PP_1105 family
BCyclobacterium marinum (strain ATCC 25205 / DSM 745)CYCMS03926UniProtKB/TrEMBL G0J796ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310:IPR012309; KEGG: dsh:Dshi_2589 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; SPTR: DNA ligase pmp logo
BCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)CYTH303451UniProtKB/TrEMBL Q11PA6ATP-dependent DNA ligase pmp logo
BDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)DYAFD03256UniProtKB/TrEMBL C6VS24ATP dependent DNA ligase pmp logo
BMarivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43)MARTH00752UniProtKB/TrEMBL E4TS21ATP dependent DNA ligase COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR016059: IPR012310: IPR012309; KEGG: cpi:Cpin_6857 ATP dependent DNA ligase; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; SPTR: ATP dependent DNA ligase; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1) pmp logo
BOwenweeksia hongkongensis (strain DSM 17368 / CIP 108786 / JCM 12287 / NRRL B-23963 / UST20020801)OWEHD02333UniProtKB/TrEMBL G8R709ATP-dependent DNA ligase PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1) pmp logo
BAequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)AEQSU01118UniProtKB/TrEMBL I3YUI4ATP-dependent DNA ligase PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase, ATP-dependent, PP_1105 family
BCellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)CELAD01793UniProtKB/TrEMBL E6XEA0ATP dependent DNA ligase COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310; IPR012309; KEGG: gfo:GFO_3524 ATP-dependent DNA ligase; PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; SPTR: DNA ligase; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region pmp logo
BCroceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090)CROAH00449UniProtKB/TrEMBL A3U5M6DNA ligase pmp logo
BDokdonia sp. (strain 4H-3-7-5)DOKS400997UniProtKB/TrEMBL F4AVH1ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: gfo:GFO_3524 ATP-dependent DNA ligase
BFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ101749UniProtKB/TrEMBL A5FJ32ATP dependent DNA ligase pmp logo
BGramella forsetii (strain KT0803)GRAFK03441UniProtKB/TrEMBL A0M767ATP-dependent DNA ligase pmp logo
BLacinutrix sp. (strain 5H-3-7-4)LACS502586UniProtKB/TrEMBL F6GJJ6ATP dependent DNA ligase PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; KEGG: fba:FIC_01805 DNA ligase pmp logo
BLeeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217)LEEBM03411UniProtKB/TrEMBL A3XHB0DNA ligase COG1793 ATP-dependent DNA ligase pmp logo
BNonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6)NONDD01789UniProtKB/TrEMBL L7WAN0ATP dependent DNA ligase
BPsychroflexus torquis (strain ATCC 700755 / ACAM 623)PSYTT01197UniProtKB/TrEMBL K4IS42ATP-dependent DNA ligase pmp logo
BRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)ROBBH00358UniProtKB/TrEMBL A4CH40DNA ligase pmp logo
BZobellia galactanivorans (strain DSM 12802 / CCUG 47099 / CIP 106680 / NCIMB 13871 / Dsij)ZOBGA02088UniProtKB/TrEMBL G0L5G7DNA ligase DNA ligase (polydeoxyribonucleotide synthase) joins two DNA fragments by catalysing the formation of an internucleotide phosphodiester bond between 5-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using ATP as a coenzyme and as the energy source. It is essential for DNA replication, DNA recombination and DNA repair; Belongs to the ATP-dependent DNA ligase family; Localized in the cytoplasm High confidence in function and specificity pmp logo
BZunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87)ZUNPS00464UniProtKB/TrEMBL D5BEV1ATP-dependent DNA ligase
BFlavobacteriaceae bacterium (strain 3519-10)FLAB301766UniProtKB/TrEMBL C6X1D5DNA ligase pmp logo
BPedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)PEDHD02538UniProtKB/TrEMBL C6Y054ATP dependent DNA ligase pmp logo
BPseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643)PSESL01437UniProtKB/TrEMBL F0S587ATP dependent DNA ligase COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310: IPR 012309: IPR 016059; KEGG: fba:FIC_01805 DNA ligase; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; SPTR: DNA ligase; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1) pmp logo
BSolitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D)SOLCM01020UniProtKB/TrEMBL H8KQ23ATP-dependent DNA ligase PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region pmp logo
BSphingobacterium sp. (strain 21)SPHS201067UniProtKB/TrEMBL F4CD67ATP dependent DNA ligase PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal; KEGG: chu:CHU_3524 ATP-dependent DNA ligase pmp logo
BProtochlamydia amoebophila (strain UWE25)PARUW00949UniProtKB/TrEMBL Q6MCM5Putative DNA ligase pmp logo
BRoseiflexus castenholzii (strain DSM 13941 / HLO8)ROSCS03354UniProtKB/TrEMBL A7NPK3ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase KEGG: rrs:RoseRS_1583 ATP dependent DNA ligase pmp logo
BRoseiflexus sp. (strain RS-1)ROSS101519UniProtKB/TrEMBL A5UTM2ATP dependent DNA ligase pmp logo
BProchlorococcus marinus (strain AS9601)PROMS00781UniProtKB/TrEMBL A2BQK8possible ATP-dependent DNA ligase COG1793 ATP-dependent DNA ligase [DNA replication, recombination, and repair] pmp logo
BProchlorococcus marinus (strain MIT 9215)PROM200814UniProtKB/TrEMBL A8G4A1Possible ATP-dependent DNA ligase pmp logo
BProchlorococcus marinus (strain MIT 9301)PROM000784UniProtKB/TrEMBL A3PCD1possible ATP-dependent DNA ligase COG1793 ATP-dependent DNA ligase [DNA replication, recombination, and repair] pmp logo
BProchlorococcus marinus (strain MIT 9312)PROM900782UniProtKB/TrEMBL Q31BF2ATP-dependent DNA ligase-like protein pmp logo
BProchlorococcus marinus (strain MIT 9515)PROM500857UniProtKB/TrEMBL A2BWA5possible ATP-dependent DNA ligase COG1793 ATP-dependent DNA ligase [DNA replication, recombination, and repair] pmp logo
BProchlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 / MED4)PROMP00818UniProtKB/TrEMBL Q7V1X0Possible ATP-dependent DNA ligase pmp logo
BCyanobium gracile (strain ATCC 27147 / PCC 6307)CYAGP00620UniProtKB/TrEMBL K9P397ATP-dependent DNA ligase PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase, ATP-dependent, PP_1105 family
BSynechococcus sp. (strain ATCC 29403 / PCC 7335)SYNS702180UniProtKB/TrEMBL B4WGY5 - pmp logo
BSynechococcus sp. (strain CC9311)SYNS301399UniProtKB/TrEMBL Q0IA79Possible ATP-dependent DNA ligase pmp logo
BSynechococcus sp. (strain CC9605)SYNSC01429UniProtKB/TrEMBL Q3AJL6putative ATP-dependent DNA ligase pmp logo
BSynechococcus sp. (strain CC9902)SYNS901029UniProtKB/TrEMBL Q3AY23putative ATP-dependent DNA ligase pmp logo
BSynechococcus sp. (strain RCC307)SYNR301017UniProtKB/TrEMBL A5GSR2ATP-dependent DNA ligase pmp logo
BSynechococcus sp. (strain WH7803)SYNPW01192UniProtKB/TrEMBL A5GL05ATP-dependent DNA ligase pmp logo
BSynechococcus sp. (strain WH8102)SYNPX01320UniProtKB/TrEMBL Q7U6L7Putative ATP-dependent DNA ligase pmp logo
BDictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT600609UniProtKB/Swiss-Prot DNLI_DICT6Thermostable DNA ligase
BDictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD00720UniProtKB/Swiss-Prot DNLI_DICTDProbable DNA ligase
BGemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)GEMAT03399UniProtKB/TrEMBL C1AD68ATP-dependent DNA ligase pmp logo
BPhycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)PHYMF01078UniProtKB/TrEMBL I0IDA2putative DNA ligase
BPlanctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)PLAL203097UniProtKB/TrEMBL D5SSZ9 pmp logo
BRhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)RHOBA00199UniProtKB/TrEMBL Q7UX47thermostable DNA ligase PMID: 8843436 best DB hits: BLAST: embl:CAC01484.1; (AL391017) putative DNA ligase [Streptomyces; E=5e-32 swissprot:P56709; DNLI_PYRFU THERMOSTABLE DNA LIGASE; E=4e-30 embl:CAC21199.1; (AJ133713) DNA ligase [Thermococcus fumicolans]; E=4e-29 COG: VNG0881G; COG1793 ATP-dependent DNA ligase; E=5e-29 PFAM: PF01068; DNA ligase; E=1.2e-28 pmp logo
BRubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)RUBBR03548UniProtKB/TrEMBL F0SQ31ATP dependent DNA ligase COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310: IPR012309; KEGG: gau:GAU_3403 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; SPTR: ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region pmp logo
BAsticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)ASTEC01316UniProtKB/TrEMBL E8RP59ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: azl:AZL_003120 DNA ligase (ATP) pmp logo
BBrevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81)BRESC02249UniProtKB/TrEMBL D9QJK5ATP dependent DNA ligase pmp logo
BCaulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059)CAUST03967UniProtKB/TrEMBL D5VPT1ATP dependent DNA ligase
BCaulobacter sp. (strain K31)CAUSK04813UniProtKB/TrEMBL B0T572ATP dependent DNA ligase pmp logo
BCaulobacter crescentus (strain ATCC 19089 / CB15)CAUCR03561UniProtKB/TrEMBL Q9A2F5DNA ligase, ATP-dependent, putative pmp logo
BCaulobacter crescentus (strain NA1000 / CB15N)CAUCN03698UniProtKB/TrEMBL A0A0H3CCB2ATP-dependent DNA ligase pmp logo
BPhenylobacterium zucineum (strain HLK1)PHEZH03332UniProtKB/TrEMBL B4RBB1DNA ligase, ATP-dependent pmp logo
BParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)PARBH00285UniProtKB/TrEMBL E0TBX1DNA ligase pmp logo
BBeijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII901052UniProtKB/TrEMBL B2IIM1ATP dependent DNA ligase pmp logo
BBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)BRADU01142UniProtKB/TrEMBL Q89VA3Bll1144 protein pmp logo
BBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB00745UniProtKB/TrEMBL A5EA66Putative DNA ligase, ATP-dependent pmp logo
BBradyrhizobium sp. (strain ORS 278)BRASO06349UniProtKB/TrEMBL A4Z2G4Putative DNA ligase, ATP-dependent
BNitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14)NITHX00536UniProtKB/TrEMBL Q1QQQ4ATP dependent DNA ligase
BNitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255)NITWN00444UniProtKB/TrEMBL Q3SVG2ATP dependent DNA ligase pmp logo
BOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)OLICO01153UniProtKB/TrEMBL B6JC89DNA ligase pmp logo
BOligotropha carboxidovorans (strain OM4)OLICM02746ncbi logo AEI03912.1ATP-dependent DNA ligase Lig
BRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)RHOPA00802UniProtKB/TrEMBL Q6NBM6Possible DNA ligase pmp logo
BRhodopseudomonas palustris (strain BisA53)RHOP500717UniProtKB/TrEMBL Q07TQ2ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase KEGG: rpd:RPD_0793 ATP dependent DNA ligase pmp logo
BRhodopseudomonas palustris (strain BisB18)RHOPB00741UniProtKB/TrEMBL Q21BB4ATP dependent DNA ligase pmp logo
BRhodopseudomonas palustris (strain BisB5)RHOPS00788UniProtKB/TrEMBL Q13D08ATP dependent DNA ligase pmp logo
BRhodopseudomonas palustris (strain DX-1)RHOPX00943UniProtKB/TrEMBL E6VBL8ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: bja:bll1144 ATP-dependent DNA ligase
BRhodopseudomonas palustris (strain HaA2)RHOP204585UniProtKB/TrEMBL Q2IR60ATP dependent DNA ligase pmp logo
BRhodopseudomonas palustris (strain TIE-1)RHOPT00865UniProtKB/TrEMBL B3QEE8ATP dependent DNA ligase pmp logo
BOchrobactrum anthropi (strain ATCC 49188 / DSM 6882 / JCM 21032 / NBRC 15819 / NCTC 12168)OCHA403992UniProtKB/TrEMBL A6X694ATP dependent DNA ligase pmp logo
BHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)HYPDA02528UniProtKB/TrEMBL D8JTA1ATP dependent DNA ligase pmp logo
BHyphomicrobium sp. (strain MC1)HYPSM03827UniProtKB/TrEMBL F8J5G8ATP dependent DNA ligase pmp logo
BPelagibacterium halotolerans (strain DSM 22347 / JCM 15775 / CGMCC 1.7692 / B2)PELHB03084UniProtKB/TrEMBL G4RGY5ATP-dependent DNA ligase LigC pmp logo
BRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)RHOVT02311UniProtKB/TrEMBL E3I5C0ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: amc:MADE_00668 DNA ligase pmp logo
BMethylobacterium extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)METEA03212UniProtKB/TrEMBL C5AY86putative ATP-dependent DNA ligase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme
BMethylobacterium extorquens (strain CM4 / NCIMB 13688)METC403394UniProtKB/TrEMBL B7KVH3ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mex:Mext_3237 ATP dependent DNA ligase pmp logo
BMethylobacterium extorquens (strain DSM 6343 / CIP 106787 / DM4)METED03838UniProtKB/TrEMBL C7CCT1Putative ATP-dependent DNA ligase
BMethylobacterium extorquens (strain PA1)METEP03188UniProtKB/TrEMBL A9VZ32ATP dependent DNA ligase pmp logo
BMethylobacterium nodulans (strain LMG 21967 / CNCM I-2342 / ORS 2060)METNO01451UniProtKB/TrEMBL B8INK7ATP dependent DNA ligase pmp logo
BMethylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB03373UniProtKB/TrEMBL B1ZKL3ATP dependent DNA ligase pmp logo
BMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)METRJ03625UniProtKB/TrEMBL B1LW17ATP dependent DNA ligase pmp logo
BMethylobacterium sp. (strain 4-46)METS400598UniProtKB/TrEMBL B0UPZ0ATP dependent DNA ligase
BMethylocystis sp. (strain SC2)METSZ02722UniProtKB/TrEMBL J7QVD7ATP dependent DNA ligase
BChelativorans sp. (strain BNC1)CHESB00032UniProtKB/TrEMBL Q11MD8ATP dependent DNA ligase PFAM: ATP dependent DNA ligase-like ATP dependent DNA ligase; KEGG: mlo:mll5481 probable DNA ligase pmp logo
BMesorhizobium australicum (strain HAMBI 3006 / LMG 24608 / WSM2073)MESAW00077UniProtKB/TrEMBL L0KET9ATP-dependent DNA ligase TIGRFAM: DNA ligase, ATP-dependent, PP_1105 family; manually curated
BMesorhizobium ciceri biovar biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271)MESCW00074UniProtKB/TrEMBL E8TMU4
BRhizobium loti (strain MAFF303099)RHILO04242UniProtKB/TrEMBL Q98BP5probable DNA ligase pmp logo
BAgrobacterium sp. (strain H13-3)AGRSH00765UniProtKB/TrEMBL F0L7S2DNA ligase catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase pmp logo
BAgrobacterium fabrum (strain C58 / ATCC 33970)AGRFC00821UniProtKB/TrEMBL Q7D0K1ATP-dependent DNA ligase pmp logo
BAgrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK01033UniProtKB/TrEMBL B9JBC9DNA ligase (ATP) protein pmp logo
BAgrobacterium vitis (strain S4 / ATCC BAA-846)AGRVS04040UniProtKB/TrEMBL B9K2C6ATP-dependent DNA ligase pmp logo
BRhizobium etli (strain CFN 42 / ATCC 51251)RHIEC01132UniProtKB/TrEMBL Q2KB17probable DNA ligase (ATP) protein similar to Atu0840 [Agrobacterium tumefaciens str. C58] and SMc03177 [Sinorhizobium meliloti]; Similar to swissprot:Q8UH45; Putative location:bacterial cytoplasm Psort-Score: 0.3252; GO_function: GO:0005524 - ATP binding; GO_function: GO:0016874 - ligase activity; GO_function: GO:0003910 - DNA ligase (ATP) activity; GO_process: GO:0006260 - DNA replication; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006310 - DNA recombination pmp logo
BRhizobium etli (strain CIAT 652)RHIE601231UniProtKB/TrEMBL B3PTH1Probable DNA ligase (ATP) protein
BRhizobium leguminosarum bv. trifolii (strain WSM1325)RHILS00896UniProtKB/TrEMBL C6AS36ATP dependent DNA ligase
BRhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW00790UniProtKB/TrEMBL B5ZUI8ATP dependent DNA ligase pmp logo
BRhizobium leguminosarum bv. viciae (strain 3841)RHIL301300UniProtKB/TrEMBL Q1MJS0putative DNA ligase similarity:fasta; with=UniProt:DNLI_PYRKO (EMBL:AB042527); Pyrococcus kodakaraensis (Thermococcus kodakaraensis).; lig; Thermostable DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]) (Lig(Tk)).; length=559; id 27.257; 565 aa overlap; query 4-537; subject 6-550 similarity:fasta; with=UniProt:Q8UH45_AGRT5 (EMBL:AE009050); Agrobacterium tumefaciens (strain C58/ATCC 33970).; ATP-dependent DNA ligase.; length=541; id 82.309; 537 aa overlap; query 1-537; subject 1-537
BRhizobium fredii (strain HH103)RHIFH02910UniProtKB/TrEMBL G9A0S1putative DNA ligase
BSinorhizobium fredii (strain NBRC 101917 / NGR234)SINFN02875UniProtKB/TrEMBL C3M8Z8Putative DNA ligase pmp logo
BRhizobium meliloti (strain 1021)RHIME02883UniProtKB/TrEMBL Q92LV8Putative DNA ligase pmp logo
BSinorhizobium meliloti (strain AK83)SINMK02875ncbi logo AEG54669.1ATP dependent DNA ligase PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: smd:Smed_2804 ATP-dependent DNA ligase
BSinorhizobium meliloti (strain BL225C)SINMB02664UniProtKB/TrEMBL A0A0E0UFZ6ATP dependent DNA ligase PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: smd:Smed_2804 ATP-dependent DNA ligase pmp logo
BSinorhizobium meliloti (strain SM11)SINMM02988UniProtKB/TrEMBL F7X9M5ATP-dependent DNA ligase pmp logo
BSinorhizobium medicae (strain WSM419)SINMW02752UniProtKB/TrEMBL A6UDA4ATP dependent DNA ligase pmp logo
BAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571)AZOC500390UniProtKB/TrEMBL A8IK30Putative ATP dependent DNA ligase pmp logo
BStarkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)STAND00068UniProtKB/TrEMBL D6ZZZ1ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: azc:AZC_0393 putative ATP dependent DNA ligase pmp logo
BXanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP201415UniProtKB/TrEMBL A7IFC5ATP dependent DNA ligase pmp logo
BHyphomonas neptunium (strain ATCC 15444)HYPNA01643UniProtKB/TrEMBL Q0C1L5Putative DNA ligase, ATP-dependent pmp logo
BDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)DINSH02555UniProtKB/TrEMBL A8LHY8ATP dependent DNA ligase pmp logo
BJannaschia sp. (strain CCS1)JANSC02658UniProtKB/TrEMBL Q28NX8ATP dependent DNA ligase pmp logo
BParacoccus denitrificans (strain Pd 1222)PARDP00394UniProtKB/TrEMBL A1AZ32ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase KEGG: ccr:CC3610 DNA ligase, ATP-dependent, putative pmp logo
BPhaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / JCM 21319 / NBRC 16654 / NCIMB 13546 / BS107)PHAIB03557UniProtKB/TrEMBL I7F280putative ATP dependent DNA ligase pmp logo
BRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS401000UniProtKB/TrEMBL Q3J3R0DNA ligase IMG reference gene:2512954357; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase, ATP-dependent, PP_1105 family pmp logo
BRhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS501472UniProtKB/TrEMBL A4WSU8ATP dependent DNA ligase
BRhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS101050UniProtKB/TrEMBL A3PIM1ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase KEGG: rsp:RSP_2413 DNA ligase pmp logo
BRhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK00713UniProtKB/TrEMBL B9KQ81ATP dependent DNA ligase
BRoseobacter denitrificans (strain ATCC 33942 / OCh 114)ROSDO01690UniProtKB/TrEMBL Q169B0thermostable DNA ligase pmp logo
BRoseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)ROSLO02803UniProtKB/TrEMBL F7ZH18putative ATP-dependent DNA ligase pmp logo
BAcidiphilium cryptum (strain JF-5)ACICJ01576UniProtKB/TrEMBL A5FYY5ATP dependent DNA ligase pmp logo
BAcidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 / AIU301)ACIMA01627UniProtKB/TrEMBL F0IYZ3putative DNA ligase
BGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)GRABC00904UniProtKB/TrEMBL Q0BTQ0ATP-dependent DNA ligase pmp logo
BAzospirillum lipoferum (strain 4B)AZOL400117UniProtKB/TrEMBL G7Z7W5DNA ligase, ATP-dependent Evidence 2b : Function of strongly homologous gene; Product type e : enzyme
BRhodospirillum centenum (strain ATCC 51521 / SW)RHOCS00626UniProtKB/TrEMBL B6IRJ6ATP dependent DNA ligase domain protein pmp logo
BTistrella mobilis (strain KA081020-065)TISMK02060UniProtKB/TrEMBL I3TMB5ATP-dependent DNA ligase
BErythrobacter litoralis (strain HTCC2594)ERYLH02621UniProtKB/TrEMBL Q2N6G6DNA ligase, ATP-dependent, putative COG1793 ATP-dependent DNA ligase pmp logo
BNovosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199)NOVAD00068UniProtKB/TrEMBL Q2GCA6DNA ligase pmp logo
BSphingobium japonicum (strain NBRC 101211 / UT26S)SPHJU01698UniProtKB/TrEMBL D4Z1S4ATP-dependent DNA ligase
BSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)SPHWW03931UniProtKB/TrEMBL A5VDF8DNA ligase
BSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256)SPHAL00285UniProtKB/TrEMBL Q1GWF9DNA ligase (ATP) pmp logo
BPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)POLGS03193UniProtKB/TrEMBL F2IXM8ATP dependent DNA ligase domain family protein pmp logo
BBurkholderia gladioli (strain BSR3)BURGS00920UniProtKB/TrEMBL F2LC08ATP dependent DNA ligase pmp logo
BBurkholderia glumae (strain BGR1)BURGB03899UniProtKB/TrEMBL C5AMU8ATP dependent DNA ligase
BBurkholderia sp. (strain CCGE1002)BURSC03793UniProtKB/TrEMBL D5WHH3ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: bxe:Bxe_B1315 ATP-dependent DNA ligase pmp logo
BBurkholderia sp. (strain CCGE1003)BURSG03636UniProtKB/TrEMBL E1TIT7ATP dependent DNA ligase
BCupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1)CUPNN05409UniProtKB/TrEMBL F8GR63DNA ligase Lig
BCupriavidus necator (strain JMP 134 / LMG 1197)CUPNJ03862UniProtKB/TrEMBL Q46UD2DNA ligase
BCupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1)CUPTR04692UniProtKB/TrEMBL B3RBB4ATP-dependent DNA ligase pmp logo
BParaburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)PARP804586UniProtKB/TrEMBL B2JRC4ATP dependent DNA ligase pmp logo
BParaburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)PARPJ05166UniProtKB/TrEMBL B2TDE0ATP dependent DNA ligase pmp logo
BParaburkholderia xenovorans (strain LB400)PARXL06005UniProtKB/TrEMBL Q13MP2DNA ligase pmp logo
BAcidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)ACIAP00437UniProtKB/TrEMBL F0Q4J7 pmp logo
BAcidovorax citrulli (strain AAC00-1)ACIAC00361UniProtKB/TrEMBL A1TJ44ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase KEGG: reu:Reut_B3895 DNA ligase (ATP)
BAcidovorax ebreus (strain TPSY)ACIET00299UniProtKB/TrEMBL B9MBA6ATP dependent DNA ligase
BAcidovorax sp. (strain JS42)ACISJ00306UniProtKB/TrEMBL A1W2U0DNA ligase (ATP) PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase KEGG: reu:Reut_B3895 DNA ligase (ATP) pmp logo
BDelftia acidovorans (strain DSM 14801 / SPH-1)DELAS02977UniProtKB/TrEMBL A9C246ATP dependent DNA ligase pmp logo
BDelftia sp. (strain Cs1-4)DELSC03616UniProtKB/TrEMBL F6B0S6ATP dependent DNA ligase PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; KEGG: dac:Daci_3044 ATP-dependent DNA ligase
BRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)RAMTT03158UniProtKB/TrEMBL F5XWS4ATP-dependent DNA ligase-like protein
BVariovorax paradoxus (strain EPS)VARPE05414UniProtKB/TrEMBL E6V9G9ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: vap:Vapar_4859 ATP-dependent DNA ligase
BVariovorax paradoxus (strain S110)VARPS04794UniProtKB/TrEMBL C5CNA0ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: aav:Aave_0375 ATP-dependent DNA ligase pmp logo
BHerbaspirillum seropedicae (strain SmR1)HERSS02244UniProtKB/TrEMBL D8IUB5ATP-dependent DNA ligase protein pmp logo
BMethylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1)METPP01483UniProtKB/TrEMBL A2SFZ1DNA ligase, ATP-dependent, putative pmp logo
BRubrivivax gelatinosus (strain NBRC 100245 / IL144)RUBGI01106UniProtKB/TrEMBL I0HN63ATP dependent DNA ligase
BAzoarcus sp. (strain BH72)AZOSB00440UniProtKB/TrEMBL A1K2K6DNA ligase DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]). This protein seals during DNA replication DNA recombination and DNA repair nicks in double-stranded DNA (By similarity). High confidence in function and specificity
BAlteromonas macleodii (strain Balearic Sea AD45)ALTMB03572UniProtKB/TrEMBL K0EK58DNA ligase COG1793 ATP-dependent DNA ligase
BAlteromonas macleodii (strain Black Sea 11)ALTMS03391UniProtKB/TrEMBL K0D5G3DNA ligase COG1793 ATP-dependent DNA ligase
BAlteromonas macleodii (strain English Channel 673)ALTME03525UniProtKB/TrEMBL A0A0E0YIT3DNA ligase COG1793 ATP-dependent DNA ligase
BAlteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype)ALTMD00661UniProtKB/TrEMBL T2DM24DNA ligase
BAlteromonas naphthalenivoransALTNA03849UniProtKB/TrEMBL F5Z6D1DNA ligase COG1793 ATP-dependent DNA ligase pmp logo
BPseudomonas brassicacearum (strain NFM421)PSEBN01211UniProtKB/TrEMBL F2K8L8putative DNA ligase (ATP) (ATP-dependent DNA ligase)
BPseudomonas fluorescens (strain Pf0-1)PSEPF01205UniProtKB/TrEMBL Q3KH02putative ATP-dependent DNA ligase pmp logo
BPseudomonas fluorescens (strain SBW25)PSEFS01280UniProtKB/TrEMBL C3K7I7
BPseudomonas fulva (strain 12-X)PSEF102057UniProtKB/TrEMBL F6A9X4ATP dependent DNA ligase PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase pmp logo
BPseudomonas mendocina (strain NK-01)PSEMN02515UniProtKB/TrEMBL F4DUS8ATP-dependent DNA ligase
BPseudomonas mendocina (strain ymp)PSEMY02158UniProtKB/TrEMBL A4XUD9ATP dependent DNA ligase pmp logo
BPseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)PSEPK01092UniProtKB/TrEMBL Q88NU9DNA ligase, ATP-dependent, putative pmp logo
BPseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)PSEP101127UniProtKB/TrEMBL A5VZJ6ATP dependent DNA ligase pmp logo
BPseudomonas putida (strain BIRD-1)PSEPB01126ncbi logo ADR58837.1ATP-dependent DNA ligase
BPseudomonas putida (strain GB-1)PSEPG04268UniProtKB/TrEMBL B0KUD0ATP dependent DNA ligase PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase KEGG: pst:PSPTO_4135 DNA ligase
BPseudomonas putida (strain W619)PSEPW01132UniProtKB/TrEMBL B1J1A8ATP dependent DNA ligase pmp logo
BPseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)PSE1401313UniProtKB/TrEMBL Q48LS6DNA ligase, ATP-dependent identified by match to protein family HMM PF01068; match to protein family HMM PF04679 pmp logo
BPseudomonas stutzeri (strain A1501)PSEU502578UniProtKB/TrEMBL A4VMW1DNA ligase, ATP-dependent pmp logo
BPseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)PSEUT02618ncbi logo AEJ05924.1ATP-dependent DNA ligase
BPseudomonas syringae pv. syringae (strain B728a)PSEU203855UniProtKB/TrEMBL Q4ZPL9ATP-dependent DNA ligase:ATP-dependent DNA ligase pmp logo
BPseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)PSESM03908UniProtKB/TrEMBL Q87XP1DNA ligase, ATP-dependent pmp logo
BLysobacter enzymogenesLYSEN02448UniProtKB/TrEMBL A0A0S2DGS2DNA ligase
BPseudoxanthomonas suwonensis (strain 11-1)PSEUU00263UniProtKB/TrEMBL E6WPU9ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: xcv:XCV1394 ATP-dependent DNA ligase pmp logo
BStenotrophomonas maltophilia (strain K279a)STRMK03306UniProtKB/TrEMBL B2FPW1Putative ATP-DEPENDENT DNA LIGASE LIGB
BStenotrophomonas maltophilia (strain R551-3)STRM502941UniProtKB/TrEMBL B4SRJ5ATP dependent DNA ligase pmp logo
BXanthomonas campestris pv. campestris (strain 8004)XANC802874UniProtKB/TrEMBL A0A0H2X996DNA ligase pmp logo
BXanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)XANCP01257UniProtKB/TrEMBL Q8PB36DNA ligase pmp logo
BXanthomonas campestris pv. campestris (strain B100)XANCB02994UniProtKB/TrEMBL B0RX10ATP-dependent DNA ligase, probable pmp logo
BXanthomonas axonopodis pv. citri (strain 306)XANAC01303UniProtKB/TrEMBL Q8PMT5DNA ligase pmp logo
BXanthomonas campestris pv. vesicatoria (strain 85-10)XANC501361UniProtKB/TrEMBL Q3BVT8ATP-dependent DNA ligase
BXanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)XANOR01761UniProtKB/TrEMBL Q5H1P2DNA ligase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark pmp logo
BXanthomonas oryzae pv. oryzae (strain MAFF 311018)XANOM01688ncbi logo BAE68526.1DNA ligase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker
BXanthomonas oryzae pv. oryzae (strain PXO99A)XANOP02636UniProtKB/TrEMBL A0A0K0GLI7DNA ligase
BAnaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)ANAD204255UniProtKB/Swiss-Prot DNLI_ANAD2Probable DNA ligase
BAnaeromyxobacter dehalogenans (strain 2CP-C)ANADE04144UniProtKB/Swiss-Prot DNLI_ANADEDNA ligase I, ATP-dependent (dnl1)
BAnaeromyxobacter sp. (strain Fw109-5)ANADF04254UniProtKB/Swiss-Prot DNLI_ANADFDNA ligase I, ATP-dependent Dnl1
BAnaeromyxobacter sp. (strain K)ANASK04237UniProtKB/Swiss-Prot DNLI_ANASKDNA ligase I, ATP-dependent Dnl1
BStigmatella aurantiaca (strain DW4/3-1)STIAD06674UniProtKB/TrEMBL E3FRD2DNA ligase, ATP-dependent pmp logo
BCorallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2)CORCM06530UniProtKB/TrEMBL H8MW57ATP-dependent DNA ligase pmp logo
BMyxococcus fulvus (strain ATCC BAA-855 / HW-1)MYXFH03122UniProtKB/TrEMBL F8CIL7ATP-dependent DNA ligase COG1793 ATP-dependent DNA ligase pmp logo
BMyxococcus xanthus (strain DK 1622)MYXXD05841UniProtKB/TrEMBL Q1CZG4DNA ligase, ATP-dependent identified by match to protein family HMM PF01068; match to protein family HMM PF04675; match to protein family HMM PF04679 pmp logo
BHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)HALO104744UniProtKB/TrEMBL D0LU58ATP dependent DNA ligase PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA ligase domain protein; KEGG: ade:Adeh_4160 ATP-dependent DNA ligase
BSorangium cellulosum (strain So ce56)SORC506824UniProtKB/Swiss-Prot DNLI_SORC5DNA ligase