OMA Group 793077 ?

trna pseudouridine synthase b


This group has 1474 members: E27 B1447

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TaxonProtein IDCross referenceFunction annotation
ESarcophilus harrisiiSARHA11710UniProtKB/TrEMBL G3W5Y6TruB pseudouridine (psi) synthase homolog 1 (E. coli) [Source:HGNC Symbol;Acc:16060]
EMacropus eugeniiMACEU09163Ensembl ENSMEUP00000006023TruB pseudouridine (psi) synthase homolog 1 (E. coli) [Source:HGNC Symbol;Acc:16060]
EFicedula albicollisFICAL06858UniProtKB/TrEMBL U3JHR7TruB pseudouridine (psi) synthase homolog 1 (E. coli) [Source:HGNC Symbol;Acc:16060]
EMnemiopsis leidyiMNELE07803unknown xref logo ML080913a-PA
EAmphimedon queenslandicaAMPQE27676UniProtKB/TrEMBL A0A1X7VUQ6
EMonosiga brevicollisMONBE02180UniProtKB/TrEMBL A9UQA2jgi|Monbr1|13301|e_gw1.2.593.1 pmp logo
ESalpingoeca rosetta (strain ATCC 50818 / BSB-021)SALR511315UniProtKB/TrEMBL F2USM6 -
EMucor circinelloidesMUCCI08772unknown xref logo 113436jgi|Mucci2|113436|Genemark1.9199_g
ERhizopus oryzaeRHIOR08677unknown xref logo RO3T_09002RO3T_09002 | RO3G_09003 | Rhizopus oryzae hypothetical protein
EPhycomyces blakesleeanusPHYBL13894unknown xref logo 118483jgi|Phybl2|118483|e_gw1.30.191.1
ECreolimax fragrantissimaCREFR07398unknown xref logo CFRG7398T1
EPlasmodium vivax (strain Salvador I)PLAVS03682UniProtKB/TrEMBL A5KCC2 - pmp logo
EBabesia bigeminaBABBI00866UniProtKB/TrEMBL A0A061DAG3tRNA pseudouridine synthase, putative
EBabesia bovisBABBO00562UniProtKB/TrEMBL A7ANK1tRNA pseudouridine synthase, putative encoded by transcript BBOV_III005720A; predicted by jigsaw pmp logo
EDictyostelium purpureumDICPU12119UniProtKB/TrEMBL F1A5V6jgi|Dicpu1|160185|GID1.0050784 pmp logo
EPolysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)POLPP06678UniProtKB/TrEMBL D3BA49 - pmp logo
EEmiliania huxleyiEMIHU26826UniProtKB/TrEMBL R1CZL2jgi|Emihu1|55432|gw1.21.147.1
EGaldieria sulphurariaGALSU03013UniProtKB/TrEMBL M2XGT5tRNA pseudouridine synthase B isoform 2
EThalassiosira pseudonanaTHAPS02885UniProtKB/TrEMBL B8CCU3Predicted protein [Source:UniProtKB/TrEMBL;Acc:B8CCU3] pmp logo
EAureococcus anophagefferensAURAN07355UniProtKB/TrEMBL F0YN09hypothetical protein pmp logo
EChlamydomonas reinhardtiiCHLRE02643unknown xref logo PACid:19860952Pseudouridine synthase family protein
EChlorella variabilisCHLVA05375UniProtKB/TrEMBL E1ZH81hypothetical protein similar to putative tRNA pseudouridine synthase; GO_function: GO:4730 - pseudouridylate synthase activity; GO_process: GO:6396 - RNA processing pmp logo
EOstreococcus lucimarinus (strain CCE9901)OSTLU03784UniProtKB/TrEMBL A4S143predicted protein go_function: pseudouridylate synthase activity; go_process: RNA processing pmp logo
EOstreococcus tauriOSTTA04502UniProtKB/TrEMBL A0A1Y5IB81Putative tRNA synthase
EMicromonas commoda (strain RCC299 / NOUM17 / CCMP2709)MICCC03891UniProtKB/TrEMBL C1E906predicted protein; GO_function: GO:3723; tRNA-pseudouridine synthase activity - RNA binding [PMID 16439]; GO_process: GO:31119 - tRNA pseudouridine synthesis pmp logo
EMicromonas pusilla (strain CCMP1545)MICPC03706UniProtKB/TrEMBL C1MSX4predicted protein GO_function: GO:4730 - pseudouridylate synthase activity; GO_process: GO:6396 - RNA processing pmp logo
EHordeum vulgare var. distichonHORVD10811unknown xref logo MLOC_58704.1Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CSN0]
BAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161)ACIC500850UniProtKB/TrEMBL C1F2Z6tRNA pseudouridine synthase B pmp logo
BKoribacter versatilis (strain Ellin345)KORVE02197UniProtKB/TrEMBL Q1IPJ6tRNA pseudouridine synthase B pmp logo
BGranulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)GRAMM03531UniProtKB/TrEMBL G8NYD7tRNA pseudouridine synthase B KEGG: aca:ACP_0897 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: Pseudouridine synthase II pmp logo
BGranulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9)GRATM02219UniProtKB/TrEMBL E8X3P8tRNA pseudouridine synthase B KEGG: aca:ACP_0897 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BTerriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63)TERRK02210UniProtKB/TrEMBL I3ZH15tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BTerriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)TERSS01055UniProtKB/TrEMBL E8UX11tRNA pseudouridine synthase B KEGG: aca:ACP_0897 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BChloracidobacterium thermophilum (strain B)CHLTF01683UniProtKB/TrEMBL G2LDK5tRNA pseudouridine 55 synthase
BSolibacter usitatus (strain Ellin6076)SOLUE06146UniProtKB/Swiss-Prot TRUB_SOLUEtRNA pseudouridine synthase B KEGG: aba:Acid345_2203 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BAcidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)ACIFD00605UniProtKB/TrEMBL C7LXY6tRNA pseudouridine synthase B pmp logo
BAcidothermus cellulolyticus (strain ATCC 43068 / 11B)ACIC101508UniProtKB/TrEMBL A0LV24tRNA pseudouridine synthase B KEGG: tfu:Tfu_0781 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BThermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51)THEBD01050UniProtKB/TrEMBL D6Y7W8tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: eba:ebA5843 tRNA pseudouridine 55 synthase
BArcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018)ARCHD00583UniProtKB/TrEMBL D7BN53tRNA pseudouridine synthase B pmp logo
BCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)CATAD07602UniProtKB/TrEMBL C7QDX5tRNA pseudouridine synthase B pmp logo
BAtopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546)ATOPD00816UniProtKB/TrEMBL C8W716tRNA pseudouridine synthase B pmp logo
BOlsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / NCIMB 702895 / VPI D76D-27C)OLSUV00976UniProtKB/TrEMBL E1QVF8tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR020103:IPR014780:IPR002501; KEGG: apv:Apar_0827 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: B6GCN3 Putative uncharacterized protein; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BCoriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2)CORGP01017UniProtKB/TrEMBL F2N9P5tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR014780:IPR002501; KEGG: apv:Apar_0827 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: tRNA pseudouridine synthase B; IMG reference gene:2503575839; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BCorynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)CORA701496UniProtKB/Swiss-Prot TRUB_CORA7tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain 241)CORD201394ncbi logo AEX44477.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain 31A)CORD301454ncbi logo AEX42160.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain ATCC 27012 / C7 (beta))CORD701455ncbi logo AEX67667.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)CORDI01432UniProtKB/Swiss-Prot TRUB_CORDItRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain CDCE 8392)CORDD01370ncbi logo AEX72378.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain HC01)CORDH01393ncbi logo AEX74662.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain HC02)CORDJ01347ncbi logo AEX76858.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain HC03)CORDK01369ncbi logo AEX79119.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain HC04)CORDL01374ncbi logo AEX81383.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain PW8)CORDW01379ncbi logo AEX70114.1tRNA pseudouridine synthase B
BCorynebacterium diphtheriae (strain VA01)CORDV01339ncbi logo AEX83621.1tRNA pseudouridine synthase B
BCorynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)COREF01823UniProtKB/Swiss-Prot Q8FPB3putative tRNA pseudouridine synthase B CE1872, similar to AE005678-4|AAK22024.1| percent identity: 37 in 290 aa
BCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)CORGL01971UniProtKB/Swiss-Prot TRUB_CORGLtRNA pseudouridine synthase B
BCorynebacterium glutamicum (strain ATCC 13032 / K051)CORGK01895ncbi logo CCH25124.1tRNA pseudouridine synthase B
BCorynebacterium glutamicum (strain R)CORGB01839UniProtKB/Swiss-Prot TRUB_CORGBHypothetical protein
BCorynebacterium jeikeium (strain K411)CORJK01096UniProtKB/Swiss-Prot TRUB_CORJKtRNA pseudouridine synthase B
BCorynebacterium kroppenstedtii (strain DSM 44385 / JCM 11950 / CIP 105744 / CCUG 35717)CORK401083UniProtKB/TrEMBL C4LJ77tRNA pseudouridine synthase B pmp logo
BCorynebacterium pseudotuberculosis (strain 1002)CORP101267ncbi logo ADL21152.1tRNA pseudouridine synthase B
BCorynebacterium pseudotuberculosis (strain C231)CORP201245UniProtKB/TrEMBL D9QB18tRNA pseudouridine synthase B pmp logo
BCorynebacterium pseudotuberculosis (strain FRC41)CORPF01275ncbi logo ADK29068.1tRNA pseudouridine synthase B
BCorynebacterium pseudotuberculosis (strain I19)CORP901266ncbi logo ADO26544.1tRNA pseudouridine synthase B
BCorynebacterium resistens (strain DSM 45100 / JCM 12819 / GTC 2026)CORRG01193UniProtKB/TrEMBL F8DY27tRNA pseudouridine synthase B Pseudouridine synthase pmp logo
BCorynebacterium ulcerans (strain BR-AD22)CORUB01373ncbi logo AEG84091.1tRNA pseudouridine synthase B Pseudouridine synthase
BCorynebacterium urealyticum (strain ATCC 43042 / DSM 7109)CORU700849UniProtKB/TrEMBL B1VDB9tRNA pseudouridine synthase B pmp logo
BGordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667)GORB402008UniProtKB/TrEMBL D0LBJ3tRNA pseudouridine synthase B pmp logo
BGordonia polyisoprenivorans (strain DSM 44266 / VH2)GORPV02010UniProtKB/TrEMBL H6MYV5tRNA pseudouridine synthase B
BHoyosella subflava (strain DSM 45089 / JCM 17490 / NBRC 109087 / DQS3-9A1)HOYSD01619UniProtKB/TrEMBL F6EJQ5tRNA pseudouridine synthase B pmp logo
BMycobacterium abscessus (strain ATCC 19977 / DSM 44196 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543)MYCA903088UniProtKB/Swiss-Prot TRUB_MYCA9tRNA pseudouridine synthase B
BMycobacterium asiaticumMYCAS01903UniProtKB/TrEMBL A0A1A3MUT4 -
BMycobacterium avium (strain 104)MYCA103475UniProtKB/Swiss-Prot TRUB_MYCA1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BMycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)MYCPA02869UniProtKB/Swiss-Prot TRUB_MYCPAtRNA pseudouridine synthase B
BMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)MYCIA03501UniProtKB/TrEMBL H8IWU8tRNA pseudouridine synthase B pmp logo
BMycobacterium chubuense (strain NBB4)MYCCN02006UniProtKB/TrEMBL I4BHT6tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); tRNA Pseudouridine synthase II, C terminal; TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BMycobacterium gilvum (strain DSM 45189 / LMG 24558 / Spyr1)MYCSR03173UniProtKB/TrEMBL E6TFK7
BMycobacterium gilvum (strain PYR-GCK)MYCGI03929UniProtKB/TrEMBL A4TCH2tRNA pseudouridine synthase B KEGG: mmc:Mmcs_2095 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BMycobacterium leprae (strain Br4923)MYCLB01531UniProtKB/TrEMBL A0A0H3MQS3tRNA pseudouridine 55 synthase pmp logo
BMycobacterium leprae (strain TN)MYCLE01530UniProtKB/Swiss-Prot TRUB_MYCLEtRNA pseudouridine synthase B
BMycobacterium marinum (strain ATCC BAA-535 / M)MYCMM01877UniProtKB/TrEMBL B2HKU5tRNA pseudouridine synthase B TruB
BMycobacterium rhodesiae (strain NBB3)MYCRN05432UniProtKB/TrEMBL G8RLW4tRNA pseudouridine 55 synthase PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BMycobacterium sinense (strain JDM601)MYCSD02535UniProtKB/TrEMBL F5YWU4tRNA pseudouridine synthase B TruB pmp logo
BMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)MYCS202475UniProtKB/TrEMBL A0QVP8TRNA pseudouridine synthase B pmp logo
BMycobacterium sp. (strain JLS)MYCSJ02033UniProtKB/Swiss-Prot TRUB_MYCSJtRNA pseudouridine synthase B KEGG: mmc:Mmcs_2095 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BMycobacterium sp. (strain KMS)MYCSK02074UniProtKB/Swiss-Prot TRUB_MYCSKtRNA pseudouridine synthase B KEGG: mmc:Mmcs_2095 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BMycobacterium sp. (strain MCS)MYCSS02062UniProtKB/Swiss-Prot TRUB_MYCSSTRNA pseudouridine synthase B
BMycobacterium africanum (strain GM041182)MYCA002782UniProtKB/TrEMBL F8M421putative tRNA pseudouridine synthase B TRUB pmp logo
BMycobacterium bovis (strain ATCC BAA-935 / AF2122/97)MYCBO00263UniProtKB/Swiss-Prot TRUB_MYCBOPROBABLE TRNA PSEUDOURIDINE SYNTHASE B TRUB (TRNA PSEUDOURIDINE 55 SYNTHASE) (PSI55 SYNTHASE) (PSEUDOURIDYLATE SYNTHASE) (URACIL HYDROLYASE) Mb2816c, truB, len: 298 aa. Equivalent to Rv2793c, len: 298 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 298 aa overlap). Probable truB, tRNA pseudouridine synthase (EC 4.2.1.70), equivalent to Q9Z5I4|TRUB_MYCLE|ML1546 OR MLCB596.24 TRNA PSEUDOURIDINE SYNTHASE B from Mycobacterium leprae (320 aa), FASTA scores: opt: 1403, E(): 2.9e-83, (74.05% identity in 293 aa overlap). Also highly similar to many e.g. Q9Z528|TRUB_STRCO|SC9F2.07c from Streptomyces coelicolor (301 aa), FASTA scores: opt: 870, E(): 7.6e-49, (50.7% identity in 296 aa overlap); P09171|TRUB_ECOLI|P35|B3166|Z4527|ECS4047 from Escherichia coli strains K12 and O157:H7 (314 aa), FASTA scores: opt: 574, E(): 1e-29, (42.5% identity in 214 aa overlap); Q9PGR1|TRUB_XYLFA|XF0237 from Xylella fastidiosa (302 aa), FASTA scores: opt: 569, E(): 2.1e-29, (41.05% identity in 285 aa overlap); etc. BELONGS TO THE TRUB FAMILY OF PSEUDOURIDINE SYNTHASES.
BMycobacterium bovis (strain BCG / Pasteur 1173P2)MYCBP02784UniProtKB/Swiss-Prot TRUB_MYCBPProbable trna pseudouridine synthase B truB
BMycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)MYCBT02788ncbi logo BAH27086.1tRNA pseudouridine synthase B
BMycobacterium canettii (strain CIPT 140010059)MYCCP02790UniProtKB/TrEMBL G0TF98putative tRNA pseudouridine synthase B TRUB (tRNA pseudouridine 55 synthase) (PSI55 synthase) (pseudouridylate synthase) (uracil hydrolyase)
BMycobacterium tuberculosis (strain ATCC 25177 / H37Ra)MYCTA02845UniProtKB/Swiss-Prot TRUB_MYCTAtRNA pseudouridine synthase B
BMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)MYCTU02815UniProtKB/Swiss-Prot TRUB_MYCTUtRNA pseudouridine synthase B pmp logo
BMycobacterium tuberculosis (strain CCDC5079)MYCTC02546ncbi logo AEJ47753.1tRNA pseudouridine synthase B
BMycobacterium tuberculosis (strain CCDC5180)MYCTD02508ncbi logo AEJ51369.1tRNA pseudouridine synthase B
BMycobacterium tuberculosis (strain F11)MYCTF02724ncbi logo EAX14629.1tRNA pseudouridine synthase B truB Mapped to H37Rv Rv2793c
BMycobacterium tuberculosis (strain KZN 1435 / MDR)MYCTK01201ncbi logo ACT24229.1tRNA pseudouridine synthase B truB
BMycobacterium ulcerans (strain Agy99)MYCUA01753UniProtKB/Swiss-Prot TRUB_MYCUAtRNA pseudouridine synthase B TruB cytoplasmic protein formation of pseudouridine at position 55 in the psi Gc loop of transfer RNAS [catalytic activity: uracil + D-ribose 5-phosphate = pseudouridine 5'-phosphate + H(2)O]
BMycobacterium vanbaalenii (strain DSM 7251 / PYR-1)MYCVP02238UniProtKB/TrEMBL A1T7J3tRNA pseudouridine synthase B KEGG: mpa:MAP2898c tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BNocardia cyriacigeorgica (strain GUH-2)NOCCG03707UniProtKB/TrEMBL H6R422tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12427942, 11142385, 11779468; Product type e : enzyme pmp logo
BNocardia farcinica (strain IFM 10152)NOCFA04067UniProtKB/Swiss-Prot TRUB_NOCFAtRNA pseudouridine synthase B
BRhodococcus erythropolis (strain PR4 / NBRC 100887)RHOE402631UniProtKB/TrEMBL C0ZYB2tRNA pseudouridine synthase TruB
BRhodococcus equi (strain 103S)RHOE101826ncbi logo CBH47987.1tRNA pseudouridine synthase B
BRhodococcus jostii (strain RHA1)RHOJR06559UniProtKB/Swiss-Prot TRUB_RHOJRPseudouridylate synthase
BRhodococcus opacus (strain B4)RHOOB06685UniProtKB/TrEMBL C1B320tRNA pseudouridine synthase TruB
BSegniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)SEGRD01514UniProtKB/TrEMBL D6Z7T1tRNA pseudouridine synthase B pmp logo
BTsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040)TSUPD01651UniProtKB/TrEMBL D5UM65tRNA pseudouridine synthase B KEGG: rha:RHA1_ro06651 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II pmp logo
BFrankia alni (strain ACN14a)FRAAA05622UniProtKB/TrEMBL Q0RDS8tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase) Evidence 2b : Function of strongly homologous gene; PubMedId : 7493321; Product type e : enzyme pmp logo
BFrankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3)FRACC03459UniProtKB/TrEMBL Q2J732tRNA pseudouridine synthase B pmp logo
BFrankia inefficax (strain DSM 45817 / CECT 9037 / EuI1c)FRAIE01089UniProtKB/TrEMBL E3J043tRNA pseudouridine synthase B KEGG: fal:FRAAL5756 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II
BFrankia sp. (strain EAN1pec)FRASN01163UniProtKB/TrEMBL A8L6F8tRNA pseudouridine synthase B pmp logo
BFrankia symbiont subsp. Datisca glomerataFRADG03184UniProtKB/TrEMBL F8B3B3tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: fre:Franean1_1186 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 2, C-terminal, bacterial-type
BBlastococcus saxobsidens (strain DD2)BLASD03541UniProtKB/TrEMBL H6RVU5tRNA pseudouridine synthase B Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12427942, 15987897; Product type e : enzyme
BGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)GEOOG03699UniProtKB/TrEMBL D2SDW1tRNA pseudouridine synthase B
BModestobacter marinus (strain BC501)MODMB04272ncbi logo CCH89755.1tRNA pseudouridine synthase B Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12427942, 15987897; Product type e : enzyme
BStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)STANL05027UniProtKB/TrEMBL D3QAV4tRNA pseudouridine synthase B pmp logo
BKineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD01445UniProtKB/TrEMBL A6W7Z8tRNA pseudouridine synthase B pmp logo
BBeutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)BEUC102471UniProtKB/TrEMBL C5BWS1tRNA pseudouridine synthase B pmp logo
BCellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)CELFA01516UniProtKB/TrEMBL F4H736tRNA pseudouridine synthase B KEGG: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II pmp logo
BCellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134)CELFN01489UniProtKB/TrEMBL D5UD75tRNA pseudouridine synthase B KEGG: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II
BCellulomonas gilvus (strain ATCC 13127 / NRRL B-14078)CELGA02031UniProtKB/TrEMBL F7ZZT3tRNA pseudouridine synthase B KEGG: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II
BBrachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)BRAFD00991UniProtKB/TrEMBL C7MBA9tRNA pseudouridine synthase B
BKytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541)KYTSD01079UniProtKB/TrEMBL C7NH20tRNA pseudouridine 55 synthase pmp logo
BJonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134)JONDD00998UniProtKB/TrEMBL C7R3E1tRNA pseudouridine synthase B pmp logo
BClavibacter michiganensis subsp. michiganensis (strain NCPPB 382)CLAM302168UniProtKB/TrEMBL A5CSY9TRNA pseudouridine synthase B pmp logo
BClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1)CLAMS01777UniProtKB/TrEMBL B0RDY4tRNA pseudouridine synthase precursor pmp logo
BLeifsonia xyli subsp. xyli (strain CTCB07)LEIXX00536UniProtKB/Swiss-Prot TRUB_LEIXXtRNA pseudouridine synthase B
BMicrobacterium testaceum (strain StLB037)MICTS00366UniProtKB/TrEMBL E8NA96pseudouridine synthase pmp logo
BArthrobacter sp. (strain FB24)ARTS201414UniProtKB/Swiss-Prot TRUB_ARTS2tRNA pseudouridine synthase B KEGG: tfu:Tfu_0781 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BGlutamicibacter arilaitensis (strain DSM 16368 / CIP 108037 / IAM 15318 / JCM 13566 / Re117)GLUAR00975UniProtKB/TrEMBL E1VUE1tRNA pseudouridylate synthase B responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs pmp logo
BKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)KOCRD01598UniProtKB/TrEMBL B2GKJ0tRNA pseudouridine synthase TruB pmp logo
BMicrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230)MICLC00646UniProtKB/TrEMBL C5C9T3tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); tRNA Pseudouridine synthase II, C terminal; TIGRFAM: tRNA pseudouridine 55 synthase
BPaenarthrobacter aurescens (strain TC1)PAEAT01494UniProtKB/Swiss-Prot TRUB_PAEATTRNA pseudouridine synthase B
BPseudarthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6)PSECP01417UniProtKB/TrEMBL B8HG60tRNA pseudouridine synthase B
BPseudarthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)PSEPM01347UniProtKB/TrEMBL F0M7D1tRNA pseudouridine synthase B PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)RENSM00625UniProtKB/TrEMBL A9WPW1tRNA pseudouridine synthase B pmp logo
BRothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA)ROTDC01540UniProtKB/TrEMBL E3H0B3tRNA pseudouridine synthase B pmp logo
BRothia mucilaginosa (strain DY-18)ROTMD01477UniProtKB/TrEMBL D2NNU2Pseudouridine synthase
BXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)XYLCX01203UniProtKB/TrEMBL D1C055tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: dsh:Dshi_3042 tRNA pseudouridine synthase B
BSanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)SANKS02279UniProtKB/TrEMBL D1BJ64tRNA pseudouridine synthase B
BActinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431)ACTM406944UniProtKB/TrEMBL I0HGP0putative tRNA pseudouridine synthase pmp logo
BActinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)ACTS507067UniProtKB/TrEMBL G8SID5tRNA pseudouridine synthase B Pseudouridine synthase pmp logo
BMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / BCRC 12538 / CBS 129.76 / JCM 10878 / NBRC 16125 / NRRL B-16091 / INA 9442)MICAI01466UniProtKB/TrEMBL D9SXU5tRNA pseudouridine synthase B
BMicromonospora sp. (strain L5)MICSL01707ncbi logo ADU07273.1
BSalinispora arenicola (strain CNS-205)SALAI01298UniProtKB/TrEMBL A8M755tRNA pseudouridine synthase B pmp logo
BSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO01357UniProtKB/TrEMBL A4X4P5tRNA pseudouridine synthase B
BVerrucosispora maris (strain AB-18-032)VERMA01484UniProtKB/TrEMBL F4FBQ1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BNakamurella multipartita (strain ATCC 700099 / DSM 44233 / CIP 104796 / JCM 9543 / NBRC 105858 / Y-104)NAKMY02095UniProtKB/TrEMBL C8XJC5tRNA pseudouridine synthase B
BKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)KRIFD02873UniProtKB/TrEMBL D2Q1L8tRNA pseudouridine synthase B pmp logo
BNocardioides sp. (strain ATCC BAA-499 / JS614)NOCSJ03119UniProtKB/TrEMBL A1SLK5TRNA pseudouridine synthase B pmp logo
BAcidipropionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070)ACIA402091UniProtKB/TrEMBL K7RPM8tRNA pseudouridine synthase B pmp logo
BPropionibacterium acnes (strain KPA171202 / DSM 16379)PROAC01459UniProtKB/Swiss-Prot TRUB_PROACtRNA pseudouridine synthase B
BPropionibacterium acnes (strain SK137)PROAS01498UniProtKB/TrEMBL D4HF23tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BMicrolunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1)MICPN01564UniProtKB/TrEMBL F5XRA1tRNA pseudouridine synthase B pmp logo
BPropionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / DSM 4902 / CIP 103027 / NCIMB 8099 / CIRM-BIA1)PROFC01418UniProtKB/TrEMBL D7GEK0tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) Uracil + D-Ribose 5-phosphate <=> Pseudouridine 5prime-phosphate + H2O pmp logo
BPseudopropionibacterium propionicum (strain F0230a)PSEPQ01156UniProtKB/TrEMBL I6XSX9tRNA pseudouridine synthase B pmp logo
BActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)ACTMD05660UniProtKB/TrEMBL C6WDK2tRNA pseudouridine synthase B pmp logo
BAmycolatopsis mediterranei (strain S699)AMYMS07238UniProtKB/TrEMBL G0FJZ7tRNA pseudouridine synthase B
BAmycolatopsis mediterranei (strain U-32)AMYMU06214UniProtKB/TrEMBL A0A0H3DCV3tRNA pseudouridine synthase B
BPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)PSEUX04484UniProtKB/TrEMBL F4D127tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: ami:Amir_5828 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal pmp logo
BSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)SACVD01410UniProtKB/TrEMBL C7MQV8tRNA pseudouridine synthase B pmp logo
BSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)SACES06874UniProtKB/TrEMBL K0K9K3tRNA pseudouridine synthase B pmp logo
BKitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)KITSK05107UniProtKB/TrEMBL E4NHV7putative tRNA pseudouridine synthase B pmp logo
BStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)STRAW02547UniProtKB/Swiss-Prot TRUB_STRAWtRNA pseudouridine synthase B
BStreptomyces bingchenggensis (strain BCW-1)STRBB03395UniProtKB/TrEMBL D7CAG2tRNA pseudouridine synthase B pmp logo
BStreptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)STREN05588UniProtKB/TrEMBL F8JTT6tRNA pseudouridine synthase B pmp logo
BStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)STRCO05296UniProtKB/Swiss-Prot TRUB_STRCOprobable tRNA pseudouridine synthase SC9F2.07c, probable tRNA pseudouridine synthase, len: 301 aa; similar to many e.g. SW:TRUB_ECOLI tRNA pseudouridine synthase B from Escherichia coli (314 aa) fasta scores; opt: 357, z-score: 415.7, E(): 7.6e-16, (37.6% identity in 234 aa overlap).
BStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG01681UniProtKB/Swiss-Prot TRUB_STRGGPutative tRNA pseudouridine synthase
BStreptomyces hygroscopicus subsp. jinggangensis (strain 5008)STRHJ06721UniProtKB/TrEMBL H2JZ55tRNA pseudouridine synthase B
BStreptomyces pratensis (strain ATCC 33331 / IAF-45CD)STRFA01584UniProtKB/TrEMBL E8W7F4tRNA pseudouridine synthase B KEGG: sgr:SGR_1808 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II
BStreptomyces scabiei (strain 87.22)STRSW02376UniProtKB/TrEMBL C9Z247Putative tRNA pseudouridine synthase pmp logo
BStreptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)STRVP05355UniProtKB/TrEMBL F2R6M0tRNA pseudouridine synthase B pmp logo
BNocardiopsis alba (strain ATCC BAA-2165 / BE74)NOCAA00703UniProtKB/TrEMBL J7LHM0tRNA pseudouridine(55) synthase
BNocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / CIP 107115 / JCM 7437 / KCTC 9190 / NBRC 14626 / NCTC 10488 / NRRL B-5397 / IMRU 509)NOCDD03537UniProtKB/TrEMBL D7B4J5tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterProIPR015225:IPR014780:IPR002501:IPR015947:IPR 020103; KEGG: tfu:Tfu_0781 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; SPTR: C1YQY8 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BThermobifida fusca (strain YX)THEFY00779UniProtKB/Swiss-Prot TRUB_THEFYtRNA pseudouridine synthase B
BStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)STRRD02041UniProtKB/TrEMBL D2AXT4tRNA pseudouridine 55 synthase pmp logo
BThermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NBRC 15933 / NCIMB 10081 / Henssen B9)THECD03254UniProtKB/TrEMBL D1AAF2tRNA pseudouridine synthase B pmp logo
BConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)CONWI03205UniProtKB/TrEMBL D3FE27tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: ade:Adeh_1105 tRNA pseudouridine synthase B
BAquifex aeolicus (strain VF5)AQUAE00497UniProtKB/Swiss-Prot TRUB_AQUAEtRNA pseudouridine synthase B
BHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)HYDTT01830UniProtKB/TrEMBL D3DKE7tRNA pseudouridine synthase B pmp logo
BHydrogenobaculum sp. (strain Y04AAS1)HYDS000921UniProtKB/TrEMBL B4U903tRNA pseudouridine synthase B pmp logo
BThermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12)THEAH01491UniProtKB/TrEMBL D3SN00tRNA pseudouridine synthase B pmp logo
BPersephonella marina (strain DSM 14350 / EX-H1)PERMH00622UniProtKB/TrEMBL C0QUQ5tRNA pseudouridine synthase B pmp logo
BSulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825)SULAA01017UniProtKB/TrEMBL C1DV95tRNA pseudouridine synthase B pmp logo
BSulfurihydrogenibium sp. (strain YO3AOP1)SULSY01452UniProtKB/TrEMBL B2V619tRNA pseudouridine synthase B pmp logo
BDesulfurobacterium thermolithotrophum (strain DSM 11699 / BSA)DESTD00368UniProtKB/TrEMBL F0S2G1tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR014780: IPR002501: IPR015240; KEGG: aae:aq_705 tRNA pseudouridine 55 synthase; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BThermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1)THEA100897UniProtKB/TrEMBL E8T1X7tRNA pseudouridine synthase B KEGG: aae:aq_705 tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II ; tRNA pseudouridine synthase B pmp logo
BRhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10)RHOM401291UniProtKB/TrEMBL D0MI93tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: pseudouridylate synthase TruB family protein; K03177 tRNA pseudouridine synthase B pmp logo
BBacteroides fragilis (strain 638R)BACF600052UniProtKB/TrEMBL E1WJU7putative tRNA pseudouridine synthase pmp logo
BBacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343)BACFN00068UniProtKB/Swiss-Prot TRUB_BACFNputative tRNA pseudouridine synthase Similar to Bacteroides thetaiotaomicron tRNA pseudouridine synthase B BT3213 SWALL:AAO78319 (EMBL:AE016939) (240 aa) fasta scores: E(): 1.6e-76, 83.33% id in 234 aa, and to Cytophaga johnsonae tRNA pseudouridine synthase B TruB SWALL:TRUB_CYTJO (SWALL:Q9RB36) (229 aa) fasta scores: E(): 2.7e-43, 52.94% id in 221 aa, and to Oryza sativa putative tRNA synthase SWALL:Q94HL3 (EMBL:AC079022) (525 aa) fasta scores: E(): 5.1e-31, 45.17% id in 228 aa. Although the similarities are to the entire proteins, only the N-terminal domain of the TruB family pseudouridylate synthase is present
BBacteroides fragilis (strain YCH46)BACFR00057UniProtKB/Swiss-Prot TRUB_BACFRtRNA pseudouridine synthase B
BBacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108)BACT600742UniProtKB/TrEMBL E6SNV4tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501: IPR014780; KEGG: bfs:BF0069 putative tRNA pseudouridine synthase; PFAM: pseudouridylate synthase TruB domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BBacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78)BACSH02210UniProtKB/TrEMBL F0R6G6tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR002501:IPR014780; KEGG: bvu:BVU_1172 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BBacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)BACTN03179UniProtKB/Swiss-Prot TRUB_BACTNtRNA pseudouridine synthase B
BBacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154)BACV801080UniProtKB/Swiss-Prot TRUB_BACV8tRNA pseudouridine synthase B
BOdoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / CIP 104287 / JCM 15291 / NCTC 10825 / 1651/6)ODOSD03042UniProtKB/TrEMBL F9Z8W9tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501: IPR014780; KEGG: cat:CA2559_04550 putative tRNA pseudouridine synthase; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BPaludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4)PALPW01227UniProtKB/TrEMBL E4T3U5tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR014780: IPR002501; KEGG: bvu:BVU_1172 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BPorphyromonas asaccharolytica (strain ATCC 25260 / DSM 20707 / BCRC 10618 / JCM 6326 / LMG 13178 / VPI 4198)PORAD01590UniProtKB/TrEMBL F4KP42tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: bvu:BVU_1172 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; IMG reference gene:2504825567; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BPorphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)PORG300536UniProtKB/TrEMBL B2RI94Putative tRNA pseudouridine synthase B pmp logo
BPrevotella denticola (strain F0289)PREDF01030UniProtKB/TrEMBL F2KYN9tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BPrevotella intermedia (strain 17)PREI701684UniProtKB/TrEMBL I1YU17tRNA pseudouridine(55) synthase
BPrevotella melaninogenica (strain ATCC 25845 / DSM 7089 / JCM 6325 / VPI 2381 / B282)PREMB00467UniProtKB/TrEMBL D9RU24tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BPrevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23)PRER201708UniProtKB/TrEMBL D5EU15tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BAlistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999)ALIFI01522UniProtKB/TrEMBL I3YLW5tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BParabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152)PARD802319UniProtKB/Swiss-Prot TRUB_PARD8tRNA pseudouridine synthase B
BTannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338)TANFA01640UniProtKB/TrEMBL G8UNJ4tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BAzobacteroides pseudotrichonymphae genomovar. CFP2AZOPC00427UniProtKB/TrEMBL B6YR70tRNA pseudouridine synthase B pmp logo
BChitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)CHIPD01657UniProtKB/TrEMBL C7PUC9tRNA pseudouridine synthase B pmp logo
BNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)NIAKG01958UniProtKB/TrEMBL G8TEF3tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: cpi:Cpin_1673 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type pmp logo
BAmoebophilus asiaticus (strain 5a2)AMOA500338UniProtKB/TrEMBL B3ERF7Putative uncharacterized protein pmp logo
BBernardetia litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4)BERLS01086UniProtKB/TrEMBL I4AI36tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BBelliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134)BELBD03321UniProtKB/TrEMBL I3Z9Z9tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BCyclobacterium marinum (strain ATCC 25205 / DSM 745)CYCMS04750UniProtKB/TrEMBL G0J6P0tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: cpi:Cpin_1673 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type pmp logo
BEchinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221)ECHVK03168UniProtKB/TrEMBL L0G2H6tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)CYTH300929UniProtKB/TrEMBL Q11WJ1pseudouridylate synthase (pseudouridine synthase) pmp logo
BDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)DYAFD01215UniProtKB/TrEMBL C6W615tRNA pseudouridine synthase B pmp logo
BEmticicia oligotrophica (strain DSM 17448 / GPTSA100-15)EMTOG03582UniProtKB/TrEMBL I2EZI5tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR014780:IPR002501; KEGG: dfe:Dfer_1246 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type pmp logo
BLeadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)LEAB400059UniProtKB/TrEMBL E4RS40tRNA pseudouridine synthase B pmp logo
BRunella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4)RUNSL04775UniProtKB/TrEMBL F8EI50tRNA pseudouridine synthase B pmp logo
BSpirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)SPILD00772UniProtKB/TrEMBL D2QH86tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: hypothetical protein ; K03177 tRNA pseudouridine synthase B pmp logo
BMarivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43)MARTH00762UniProtKB/TrEMBL E4TSG2tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501: IPR014780; KEGG: gfo:GFO_3038 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BBlattabacterium sp. subsp. Blattella germanica (strain Bge)BLASB00332UniProtKB/TrEMBL D0JB32tRNA-pseudouridine synthase I pmp logo
BBlattabacterium sp. subsp. Periplaneta americana (strain BPLAN)BLASP00267UniProtKB/TrEMBL D0J985tRNA pseudouridine synthase B pmp logo
BFluviicola taffensis (strain DSM 16823 / NCIMB 13979 / RW262)FLUTR00909UniProtKB/TrEMBL F2IK26tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: gfo:GFO_3038 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: TRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BOwenweeksia hongkongensis (strain DSM 17368 / CIP 108786 / JCM 12287 / NRRL B-23963 / UST20020801)OWEHD01888UniProtKB/TrEMBL G8R2D4tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BAequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)AEQSU01372UniProtKB/TrEMBL I3YV88tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BCapnocytophaga canimorsus (strain 5)CAPCC01681UniProtKB/TrEMBL F9YS13tRNA pseudouridylate synthase AltName: Full=tRNA pseudouridine 55 synthase;Short=Psi55 synthase;AltName: Full=tRNA-uridine isomerase;AltName: Full=tRNA pseudouridylate synthase; Pseudouridine synthase II, TruB, N-terminal, bacterial-type (TIGR00431); TRNA-PSEUDOURIDINE SYNTHASE (PTHR13767); TRUB_MF_01080 (MF_01080); Pseudouridine synthase, catalytic domain (SSF55120); Pseudouridine synthase II, TruB, N-terminal (PF01509); GO_function: GO:0003723 - RNA binding; GO_function: GO:0009982 - pseudouridine synthase activity; GO_process: GO:0006396 - RNA processing; GO_process: GO:0001522 - pseudouridine synthesis; GO_process: GO:0009451 - RNA modification pmp logo
BCellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)CELAD00983UniProtKB/TrEMBL E6X553tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780; IPR002501; KEGG: fbc:FB2170_07679 putative tRNA pseudouridine synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BCellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20)CELLC00896UniProtKB/TrEMBL F0RDI4tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780: IPR002501; KEGG: fbc:FB2170_07679 putative tRNA pseudouridine synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BCroceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090)CROAH00903UniProtKB/TrEMBL A3U6Y2putative tRNA pseudouridine synthase pmp logo
BDokdonia sp. (strain 4H-3-7-5)DOKS401254UniProtKB/TrEMBL F4B107tRNA pseudouridine synthase B KEGG: cat:CA2559_04550 putative tRNA pseudouridine synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BFlavobacterium branchiophilum (strain FL-15)FLABF02536UniProtKB/TrEMBL G2Z4Z8tRNA pseudouridine synthase B pmp logo
BFlavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87)FLACA01715UniProtKB/TrEMBL G8X9N1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BFlavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9)FLAIG02523UniProtKB/TrEMBL H8XRX8tRNA pseudouridine synthase B pmp logo
BFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ100567UniProtKB/Swiss-Prot TRUB_FLAJ1tRNA pseudouridine synthase B
BFlavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)FLAPJ02289UniProtKB/TrEMBL A6H238tRNA pseudouridine synthase B pmp logo
BGramella forsetii (strain KT0803)GRAFK02961UniProtKB/TrEMBL A0M5T7tRNA pseudouridine synthase B pmp logo
BLacinutrix sp. (strain 5H-3-7-4)LACS501250UniProtKB/TrEMBL F6GHL2tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: cao:Celal_1039 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal pmp logo
BLeeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217)LEEBM00200UniProtKB/TrEMBL A3XQ40putative tRNA pseudouridine synthase COG0130 Pseudouridine synthase pmp logo
BMaribacter sp. (strain HTCC2170 / KCCM 42371)MARSH01765UniProtKB/TrEMBL A4AVX9putative tRNA pseudouridine synthase pmp logo
BMuricauda ruestringensis (strain DSM 13258 / CIP 107369 / LMG 19739 / B1)MURRD01012UniProtKB/TrEMBL G2PM20tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR002501:IPR014780; KEGG: fbc:FB2170_07679 putative tRNA pseudouridine synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB pmp logo
BNonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6)NONDD01325UniProtKB/TrEMBL L7W8B3pseudouridine synthase pmp logo
BOrnithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / CIP 104009 / LMG 9086)ORNRL01291UniProtKB/TrEMBL I4A0Z2tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BPsychroflexus torquis (strain ATCC 700755 / ACAM 623)PSYTT01879UniProtKB/TrEMBL K4IIU6tRNA pseudouridine synthase TruB pmp logo
BRiemerella anatipestifer (strain RA-GD)RIEAR00135ncbi logo ADZ11339.1Pseudouridine synthase
BRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)ROBBH00996UniProtKB/TrEMBL A4CIX8putative tRNA pseudouridine synthase pmp logo
BWeeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78)WEEVC00475UniProtKB/TrEMBL F0NZ78tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR002501:IPR014780; KEGG: fps:FP2357 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BZobellia galactanivorans (strain DSM 12802 / CCUG 47099 / CIP 106680 / NCIMB 13871 / Dsij)ZOBGA01305UniProtKB/TrEMBL G0L3P3tRNA pseudouridine synthase B TruB is responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs. It catalyzes the reaction: tRNA uridine = tRNA pseudouridine. Localized in the cytoplasm. High confidence in function and specificity pmp logo
BZunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87)ZUNPS04358UniProtKB/TrEMBL D5BCB7tRNA pseudouridine synthase B pmp logo
BFlavobacteriaceae bacterium (strain 3519-10)FLAB300909UniProtKB/TrEMBL C6X4Q1tRNA pseudouridine synthase B pmp logo
BHaliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O)HALH100903UniProtKB/TrEMBL F4L6F0tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: fbc:FB2170_07679 putative tRNA pseudouridine synthase; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; IMG reference gene:2504770291; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSaprospira grandis (strain Lewin)SAPGL00741UniProtKB/TrEMBL H6L1F8tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BPedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)PEDHD03510UniProtKB/TrEMBL C6XTG0tRNA pseudouridine synthase B pmp logo
BPseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643)PSESL00240UniProtKB/TrEMBL F0SEG5tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501: IPR 014780; KEGG: phe:Phep_3547 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: Putative tRNA pseudouridine synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSolitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D)SOLCM02801UniProtKB/TrEMBL H8KNH6tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain) pmp logo
BSphingobacterium sp. (strain 21)SPHS200527UniProtKB/TrEMBL F4C7Z5tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: phe:Phep_3547 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II pmp logo
BCaldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01)CALEA00448UniProtKB/TrEMBL I0GIJ9tRNA pseudouridine synthase B pmp logo
BChlamydia abortus (strain DSM 27085 / S26/3)CHLAB00443UniProtKB/Swiss-Prot TRUB_CHLABtRNA pseudouridine synthase B Similar to Haemophilus influenzae tRNA pseudouridine synthase B TruB or hi1289 SWALL:TRUB_HAEIN (SWALL:P45142) (312 aa) fasta scores: E(): 4.1e-29, 41.79% id in 201 aa and Clostridium acetobutylicum pseudouridine synthase cac1805 SWALL:Q97I48 (EMBL:AE007689) (289 aa) fasta scores: E(): 1.2e-31, 45.22% id in 199 aa
BChlamydia felis (strain Fe/C-56)CHLFF00544UniProtKB/Swiss-Prot TRUB_CHLFFtRNA pseudouridine synthase B EC 4.2.1.70
BChlamydophila pecorum (strain ATCC VR-628 / E58)CHLPE00722ncbi logo AEB41760.1tRNA pseudouridine synthase B
BChlamydia pneumoniaeCHLPN00308UniProtKB/Swiss-Prot TRUB_CHLPNtRNA pseudouridine synthase B
BChlamydophila pneumoniae (strain LPCoLN)CHLPP00434ncbi logo ACZ33294.1tRNA pseudouridine synthase B
BChlamydia trachomatis (strain D/UW-3/Cx)CHLTR00096UniProtKB/Swiss-Prot TRUB_CHLTRtRNA pseudouridine synthase B
BChlamydia trachomatis (strain L2c)CHLTC00373ncbi logo AEJ77238.1tRNA pseudouridine synthase B [J] COG0130 Pseudouridine synthase
BChlamydia trachomatis serovar A (strain A2497)CHLT400428UniProtKB/TrEMBL G4NM66tRNA pseudouridine synthase B pmp logo
BChlamydia trachomatis serovar B (strain Jali20/OT)CHLTJ00096ncbi logo CAX10541.1tRNA pseudouridine synthase B
BChlamydia trachomatis serovar B (strain TZ1A828/OT)CHLTZ00096ncbi logo CAX09647.1tRNA pseudouridine synthase B
BChlamydia trachomatis serovar D (strain D-EC)CHLTD00093ncbi logo ADI50769.1tRNA pseudouridine synthase B
BChlamydia trachomatis serovar D (strain D-LC)CHLTL00093ncbi logo ADI51781.1tRNA pseudouridine synthase B
BChlamydia trachomatis serovar E (strain E/11023)CHLT100098ncbi logo ADH20552.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BChlamydia trachomatis serovar E (strain E/150)CHLT500099ncbi logo ADH16860.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BChlamydia trachomatis serovar E (strain Sweden2)CHLTS00096ncbi logo CBJ14610.1tRNA pseudouridine synthase B
BChlamydia trachomatis serovar G (strain G/11074)CHLTG00097ncbi logo ADH19632.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BChlamydia trachomatis serovar G (strain G/11222)CHLT000096ncbi logo ADH18704.1tRNA pseudouridine synthase B
BChlamydia trachomatis serovar G (strain G/9301)CHLT900097ncbi logo ADH96728.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BChlamydia trachomatis serovar G (strain G/9768)CHLT700097ncbi logo ADH17785.1tRNA pseudouridine synthase B
BChlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B)CHLT200345UniProtKB/Swiss-Prot TRUB_CHLT2tRNA pseudouridine synthase B
BChlamydia trachomatis serovar L2b (strain UCH-1/proctitis)CHLTB00345UniProtKB/Swiss-Prot TRUB_CHLTBtRNA pseudouridine synthase B
BChlamydophila psittaci (strain ATCC VR-125 / 6BC)CHLP600448ncbi logo ADZ18125.1tRNA pseudouridine synthase B [J] COG0130 Pseudouridine synthase
BChlamydophila psittaci (strain RD1)CHLP100440ncbi logo CBY16984.1tRNA pseudouridine synthase B
BProtochlamydia amoebophila (strain UWE25)PARUW00758UniProtKB/Swiss-Prot TRUB_PARUWtRNA pseudouridine synthase B
BParachlamydia acanthamoebae (strain UV7)PARAV01948UniProtKB/TrEMBL F8KXF6tRNA pseudouridine synthase B pmp logo
BSimkania negevensis (strain ATCC VR-1471 / Z)SIMNZ01755UniProtKB/TrEMBL F8L9T6tRNA pseudouridine synthase B pmp logo
BWaddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044)WADCW00817UniProtKB/TrEMBL D6YVR1tRNA pseudouridine synthase B Pseudouridine synthase pmp logo
BChlorobaculum parvum (strain NCIB 8327)CHLP801755UniProtKB/TrEMBL B3QQI0tRNA pseudouridine synthase B pmp logo
BChlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)CHLTE00241UniProtKB/Swiss-Prot TRUB_CHLTEtRNA pseudouridine synthase B
BChlorobium chlorochromatii (strain CaD3)CHLCH01428UniProtKB/Swiss-Prot TRUB_CHLCHtRNA pseudouridine synthase B
BChlorobium limicola (strain DSM 245 / NBRC 103803 / 6330)CHLL200285UniProtKB/TrEMBL B3EFB3tRNA pseudouridine synthase B pmp logo
BChlorobium phaeobacteroides (strain BS1)CHLPB00374UniProtKB/TrEMBL B3ELP0tRNA pseudouridine synthase B pmp logo
BChlorobium phaeobacteroides (strain DSM 266)CHLPD00339UniProtKB/TrEMBL A1BDF3tRNA pseudouridine synthase B KEGG: cch:Cag_1460 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BChlorobium phaeovibrioides (strain DSM 265 / 1930)CHLPM01537UniProtKB/Swiss-Prot TRUB_CHLPMtRNA pseudouridine synthase B KEGG: plt:Plut_1777 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BChloroherpeton thalassium (strain ATCC 35110 / GB-78)CHLT301226UniProtKB/Swiss-Prot TRUB_CHLT3tRNA pseudouridine synthase B
BChlorobium luteolum (strain DSM 273 / 2530)CHLL701733UniProtKB/Swiss-Prot TRUB_CHLL7tRNA pseudouridine synthase B
BPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)PELPB00365UniProtKB/TrEMBL B4SCE9tRNA pseudouridine synthase B pmp logo
BProsthecochloris aestuarii (strain DSM 271 / SK 413)PROA200359UniProtKB/TrEMBL B4S4S8tRNA pseudouridine synthase B pmp logo
BAnaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1)ANATU00220UniProtKB/TrEMBL E8MZB3tRNA pseudouridine synthase B protein synonym:Psi55 synthase protein synonym:tRNA pseudouridine 55 synthase protein synonym:tRNA pseudouridylate synthase protein synonym:tRNA-uridine isomerase pmp logo
BChloroflexus aggregans (strain MD-66 / DSM 9485)CHLAD03449UniProtKB/TrEMBL B8G9Q4tRNA pseudouridine synthase B pmp logo
BChloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)CHLAA02955UniProtKB/TrEMBL A9WGQ0tRNA pseudouridine synthase B pmp logo
BChloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)CHLSY03190ncbi logo ACM54641.1tRNA pseudouridine synthase B
BRoseiflexus castenholzii (strain DSM 13941 / HLO8)ROSCS01085UniProtKB/TrEMBL A7NIC7tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II KEGG: rrs:RoseRS_3755 tRNA pseudouridine synthase B pmp logo
BRoseiflexus sp. (strain RS-1)ROSS103646UniProtKB/TrEMBL A5UZQ6tRNA pseudouridine synthase B pmp logo
BHerpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)HERA200476UniProtKB/TrEMBL A9AV52tRNA pseudouridine synthase B pmp logo
BDehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1)DEHMB00848UniProtKB/Swiss-Prot TRUB_DEHMBtRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BDehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)DEHM100871UniProtKB/Swiss-Prot TRUB_DEHM1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BDehalococcoides mccartyi (strain CBDB1)DEHMC00792UniProtKB/Swiss-Prot TRUB_DEHMCtRNA pseudouridine synthase B
BDehalococcoides mccartyi (strain GT)DEHMG00782ncbi logo ADC74191.1tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: det:DET0981 tRNA pseudouridine synthase B
BDehalococcoides mccartyi (strain VS)DEHMV00793UniProtKB/TrEMBL D2BI31tRNA pseudouridine synthase B pmp logo
BDehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9)DEHLB00479UniProtKB/TrEMBL D8JZQ8tRNA pseudouridine synthase B KEGG: rrs:RoseRS_3755 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BSphaerobacter thermophilus (strain DSM 20745 / S 6022)SPHTD01251UniProtKB/TrEMBL D1C378tRNA pseudouridine synthase B pmp logo
BThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)THERP00740UniProtKB/TrEMBL B9KZ57tRNA pseudouridine synthase B pmp logo
BDesulfurispirillum indicum (strain ATCC BAA-1389 / S5)DESIS01587UniProtKB/TrEMBL E6W0E1tRNA pseudouridine synthase B KEGG: hau:Haur_0479 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BGloeobacter violaceus (strain PCC 7421)GLOVI03669UniProtKB/Swiss-Prot TRUB_GLOVItRNA pseudouridine synthase B ORF_ID:gll3690
BAnabaena cylindrica (strain ATCC 27899 / PCC 7122)ANACC00944UniProtKB/TrEMBL K9ZCW2tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR002501:IPR015240:IPR014780; KEGG: naz:Aazo_3977 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB
BAnabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT04891UniProtKB/Swiss-Prot TRUB_ANAVTtRNA pseudouridine synthase B
BNostoc punctiforme (strain ATCC 29133 / PCC 73102)NOSP701092UniProtKB/TrEMBL B2IX90tRNA pseudouridine synthase B pmp logo
BNostoc sp. (strain ATCC 29411 / PCC 7524)NOSS700990UniProtKB/TrEMBL K9QQ66tRNA pseudouridine 55 synthase PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BNostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)NOSS101527UniProtKB/Swiss-Prot TRUB_NOSS1tRNA pseudouridine synthase B
BNostoc azollae (strain 0708)NOSA002795UniProtKB/TrEMBL D7E5A8tRNA pseudouridine synthase B pmp logo
BAtelocyanobacterium thalassa (isolate ALOHA)ATETH01055UniProtKB/TrEMBL D3EQP7pseudouridine synthase PFAM: TruB family pseudouridylate synthase (N terminal domain) pmp logo
BHalothece sp. (strain PCC 7418)HALP701061UniProtKB/TrEMBL K9Y912tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; InterPro IPR014780:IPR002501:IPR015240; KEGG: ava:Ava_4983 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B pmp logo
BCyanobacterium aponinum (strain PCC 10605)CYAAP02535UniProtKB/TrEMBL K9Z6B0tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR014780:IPR002501; KEGG: ter:Tery_2319 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type
BCyanobacterium stanieri (strain ATCC 29140 / PCC 7202)CYASC01392UniProtKB/TrEMBL K9YLM4tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; InterPro IPR014780:IPR002501:IPR015240; KEGG: cyt:cce_1905 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B
BMicrocystis aeruginosa (strain NIES-843)MICAN02611UniProtKB/Swiss-Prot TRUB_MICANtRNA pseudouridine synthase B
BCyanothece sp. (strain ATCC 51142)CYAA501885UniProtKB/TrEMBL B1X0G6tRNA pseudouridine synthase B pmp logo
BCyanothece sp. (strain PCC 7424)CYAP704957UniProtKB/Swiss-Prot TRUB_CYAP7tRNA pseudouridine synthase B
BCyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP403593UniProtKB/TrEMBL B8HUP6tRNA pseudouridine synthase B
BCyanothece sp. (strain PCC 7822)CYAP202543UniProtKB/TrEMBL E0UJZ0tRNA pseudouridine synthase B pmp logo
BCyanothece sp. (strain PCC 8801)CYAP801240UniProtKB/TrEMBL B7K3L1tRNA pseudouridine synthase B pmp logo
BCyanothece sp. (strain PCC 8802)CYAP001261ncbi logo ACV00240.1tRNA pseudouridine synthase B
BArthrospira platensis (strain NIES-39 / IAM M-135)ARTPN01077UniProtKB/TrEMBL D5A264 -
BTrichodesmium erythraeum (strain IMS101)TRIEI01954UniProtKB/Swiss-Prot TRUB_TRIEITRNA pseudouridine synthase B
BStanieria cyanosphaera (strain ATCC 29371 / PCC 7437)STAC703553UniProtKB/TrEMBL K9XYU3tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: ter:Tery_2319 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type
BAcaryochloris marina (strain MBIC 11017)ACAM102827UniProtKB/Swiss-Prot TRUB_ACAM1tRNA pseudouridine synthase B
BSynechocystis sp. (strain PCC 6803 / Kazusa)SYNY303070UniProtKB/Swiss-Prot TRUB_SYNY3tRNA pseudouridine synthase B
BProchlorococcus marinus (strain AS9601)PROMS01543UniProtKB/Swiss-Prot TRUB_PROMSPutative tRNA pseudouridine 55 synthase COG130 Pseudouridine synthase [Translation, ribosomal structure and biogenesis]
BProchlorococcus marinus (strain MIT 9211)PROM401401UniProtKB/TrEMBL A9BBX0Putative tRNA pseudouridine 55 synthase pmp logo
BProchlorococcus marinus (strain MIT 9215)PROM201571UniProtKB/Swiss-Prot TRUB_PROM2Putative tRNA pseudouridine 55 synthase
BProchlorococcus marinus (strain MIT 9301)PROM001533UniProtKB/Swiss-Prot TRUB_PROM0Putative tRNA pseudouridine 55 synthase COG130 Pseudouridine synthase [Translation, ribosomal structure and biogenesis]
BProchlorococcus marinus (strain MIT 9303)PROM300530UniProtKB/TrEMBL A2C731Putative tRNA pseudouridine 55 synthase pmp logo
BProchlorococcus marinus (strain MIT 9312)PROM901565UniProtKB/Swiss-Prot TRUB_PROM9tRNA pseudouridine synthase B
BProchlorococcus marinus (strain MIT 9313)PROMM01820UniProtKB/Swiss-Prot TRUB_PROMMPutative tRNA pseudouridine synthase Alternative locus ID:P9313_17921
BProchlorococcus marinus (strain MIT 9515)PROM501501UniProtKB/Swiss-Prot TRUB_PROM5Putative tRNA pseudouridine 55 synthase COG130 Pseudouridine synthase [Translation, ribosomal structure and biogenesis]
BProchlorococcus marinus (strain NATL1A)PROM101747UniProtKB/Swiss-Prot TRUB_PROM1Putative tRNA pseudouridine 55 synthase
BProchlorococcus marinus (strain NATL2A)PROMT01701UniProtKB/Swiss-Prot TRUB_PROMTtRNA pseudouridine synthase B
BProchlorococcus marinus (strain SARG / CCMP1375 / SS120)PROMA01424UniProtKB/Swiss-Prot TRUB_PROMAtRNA pseudouridine synthase B
BProchlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 / MED4)PROMP01528UniProtKB/Swiss-Prot TRUB_PROMPtRNA pseudouridine synthase B
BCyanobium gracile (strain ATCC 27147 / PCC 6307)CYAGP02967UniProtKB/TrEMBL K9PB72tRNA pseudouridine 55 synthase PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)SYNP600328UniProtKB/Swiss-Prot TRUB_SYNP6tRNA pseudouridine synthase B
BSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP200474UniProtKB/TrEMBL B1XPD5tRNA pseudouridine synthase B pmp logo
BSynechococcus sp. (strain ATCC 29403 / PCC 7335)SYNS701136UniProtKB/TrEMBL B4WM04 - pmp logo
BSynechococcus sp. (strain CC9311)SYNS302187UniProtKB/Swiss-Prot TRUB_SYNS3TRNA pseudouridine synthase B
BSynechococcus sp. (strain CC9605)SYNSC02082UniProtKB/TrEMBL Q3AHR2tRNA pseudouridine synthase B pmp logo
BSynechococcus sp. (strain CC9902)SYNS900536UniProtKB/TrEMBL Q3AZG6tRNA pseudouridine synthase B pmp logo
BSynechococcus sp. (strain JA-2-3B'a(2-13))SYNJB02132UniProtKB/TrEMBL Q2JJL0tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BSynechococcus sp. (strain JA-3-3Ab)SYNJA01261UniProtKB/TrEMBL Q2JUU3tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BSynechococcus sp. (strain RCC307)SYNR301829UniProtKB/TrEMBL A5GV25TRNA pseudouridine synthase B pmp logo
BSynechococcus sp. (strain WH7803)SYNPW01968UniProtKB/Swiss-Prot TRUB_SYNPWTRNA pseudouridine synthase B
BSynechococcus sp. (strain WH8102)SYNPX00544UniProtKB/Swiss-Prot TRUB_SYNPXtRNA pseudouridine synthase B
BThermosynechococcus elongatus (strain BP-1)THEEB01577UniProtKB/Swiss-Prot TRUB_THEEBtRNA pseudouridine synthase B
BCalditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1)CALNY01281UniProtKB/TrEMBL E4TJD8tRNA pseudouridine synthase B pmp logo
BDeferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1)DEFDS01475UniProtKB/TrEMBL D3PEF9tRNA pseudouridine synthase B pmp logo
BDenitrovibrio acetiphilus (strain DSM 12809 / N2460)DENA201275UniProtKB/TrEMBL D4H7X1tRNA pseudouridine synthase B KEGG: ftn:FTN_1462 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BFlexistipes sinusarabici (strain DSM 4947 / MAS 10)FLESM01424UniProtKB/TrEMBL F8E8D0tRNA pseudouridine synthase B pmp logo
BDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV00939UniProtKB/Swiss-Prot TRUB_DEIDVPutative tRNA pseudouridylate synthase B
BDeinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34)DEIML02062UniProtKB/TrEMBL E8U9I9tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR002501: IPR014780; KEGG: dra:DR_1323 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BDeinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200)DEIPD03124UniProtKB/TrEMBL L0A6T8tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BDeinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703 / MRP)DEIPM01233UniProtKB/TrEMBL F0RP08tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780:IPR002501; KEGG: ddr:Deide_08630 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; IMG reference gene:2504122647; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)DEIRA01294UniProtKB/Swiss-Prot TRUB_DEIRAtRNA pseudouridine synthase B
BTruepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)TRURR02442UniProtKB/TrEMBL D7CTQ9tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501:IPR020103:IPR015947:IPR014780; KEGG: ttj:TTHA0217 tRNA pseudouridine 55 synthase; PFAM: pseudouridylate synthase TruB domain protein; SPTR: Q5SLS6 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); tRNA Pseudouridine synthase II, C terminal; TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BMarinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1)MARHT02034UniProtKB/TrEMBL F2NN71tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780:IPR002501; KEGG: ttj:TTHA0217 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; IMG reference gene:2504661704; PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BOceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506)OCEP501999UniProtKB/TrEMBL E4U553tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR014780: IPR002501; KEGG: ttj:TTHA0217 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)THET201756UniProtKB/Swiss-Prot TRUB_THET2tRNA pseudouridine synthase B
BThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)THET800217UniProtKB/Swiss-Prot TRUB_THET8tRNA pseudouridine synthase B
BThermus thermophilus (strain SG0.5JP17-16)THETG00167UniProtKB/TrEMBL F6DI84tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: truB; tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal
BDictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT601049UniProtKB/TrEMBL B5YEH8tRNA pseudouridine synthase B pmp logo
BDictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD01149UniProtKB/TrEMBL B8E2Z1tRNA pseudouridine synthase B pmp logo
BElusimicrobium minutum (strain Pei191)ELUMP00663UniProtKB/TrEMBL B2KCA4tRNA pseudouridine synthase B pmp logo
BUncultured termite group 1 bacterium phylotype Rs-D17UNCTG00234UniProtKB/Swiss-Prot TRUB_UNCTGtRNA pseudouridine synthase B
BFibrobacter succinogenes (strain ATCC 19169 / S85)FIBSS02268UniProtKB/TrEMBL C9RKT6tRNA pseudouridine synthase B pmp logo
BAlicyclobacillus acidocaldarius (strain Tc-4-1)ALIAT01308UniProtKB/TrEMBL F8III1tRNA pseudouridine synthase B pmp logo
BAlicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-1A)ALIAD01381UniProtKB/TrEMBL C8WWJ2tRNA pseudouridine synthase B
BKyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2)KYRT201467UniProtKB/TrEMBL D5WPJ6tRNA pseudouridine synthase B KEGG: aac:Aaci_1438 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; DKCLD domain protein pmp logo
BAmphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01)AMPXN01442UniProtKB/TrEMBL K0J388tRNA pseudouridine synthase B pmp logo
BAnoxybacillus flavithermus (strain DSM 21510 / WK1)ANOFW01658UniProtKB/TrEMBL B7GG72tRNA pseudouridine synthase B pmp logo
BBacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)BACAS01738ncbi logo CBI42864.1tRNA pseudouridine 55 synthase
BBacillus anthracisBACAN03530UniProtKB/Swiss-Prot TRUB_BACANtRNA pseudouridine synthase B pmp logo
BBacillus anthracis (strain A0248)BACAA03391ncbi logo ACQ50393.1tRNA pseudouridine synthase B
BBacillus anthracis (strain CDC 684 / NRRL 3495)BACAC00602ncbi logo ACP14828.1tRNA pseudouridine synthase B
BBacillus atrophaeus (strain 1942)BACA101221UniProtKB/TrEMBL A0A0H3DZC0tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BBacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4)BACCJ02407UniProtKB/TrEMBL E6TS56tRNA pseudouridine synthase B KEGG: truB; tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BBacillus cereus (strain 03BB102)BACC303714UniProtKB/TrEMBL A0A158RHT0tRNA pseudouridine synthase B pmp logo
BBacillus cereus (strain AH187)BACC703648UniProtKB/TrEMBL B7HLE3tRNA pseudouridine synthase B
BBacillus cereus (strain AH820)BACC003721UniProtKB/TrEMBL B7JJ87tRNA pseudouridine synthase B
BBacillus cereus (strain ATCC 10987 / NRS 248)BACC103800UniProtKB/Swiss-Prot TRUB_BACC1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BBacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)BACCR03609UniProtKB/Swiss-Prot TRUB_BACCRtRNA pseudouridine synthase B
BBacillus cereus (strain B4264)BACC403744UniProtKB/TrEMBL B7HDT3tRNA pseudouridine synthase B
BBacillus cereus (strain G9842)BACC203808UniProtKB/TrEMBL B7IUG8tRNA pseudouridine synthase B
BBacillus cereus (strain Q1)BACCQ03469UniProtKB/TrEMBL B9IV98tRNA pseudouridine synthase B
BBacillus cereus (strain ZK / E33L)BACCZ03531UniProtKB/Swiss-Prot TRUB_BACCZtRNA pseudouridine synthase B (tRNA-pseudouridine synthase I)
BBacillus cereus var. anthracis (strain CI)BACAI03525UniProtKB/TrEMBL D8H804tRNA pseudouridine synthase B pmp logo
BBacillus clausii (strain KSM-K16)BACSK02212UniProtKB/Swiss-Prot TRUB_BACSKtRNA pseudouridine synthase B
BBacillus coagulans (strain 2-6)BACC601165UniProtKB/TrEMBL F7Z461tRNA pseudouridine synthase B PFAM: TruB_N
BBacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)BACCN02318UniProtKB/Swiss-Prot TRUB_BACCNtRNA pseudouridine synthase B
BBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)BACHD02369UniProtKB/Swiss-Prot TRUB_BACHDtRNA pseudouridine synthase B
BBacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46)BACLD02060UniProtKB/Swiss-Prot TRUB_BACLDtRNA pseudouridine synthase TruB
BBacillus megaterium (strain ATCC 12872 / QMB1551)BACMQ04024UniProtKB/TrEMBL D5DQ59tRNA pseudouridine synthase B
BBacillus megaterium (strain DSM 319)BACMD04021UniProtKB/TrEMBL D5DKW9tRNA pseudouridine synthase B pmp logo
BBacillus pseudofirmus (strain OF4)BACPE02321UniProtKB/TrEMBL D3FU01tRNA pseudouridine 5S synthase COG0130 Pseudouridine synthase pmp logo
BBacillus pumilus (strain SAFR-032)BACP201548UniProtKB/Swiss-Prot TRUB_BACP2tRNA pseudouridine 55 synthase
BBacillus subtilis (strain BSn5)BACST04056ncbi logo ADV96693.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BBacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23)BACPZ01698UniProtKB/TrEMBL E0TUF5tRNA pseudouridine 55 synthase
BBacillus subtilis subsp. spizizenii (strain TU-B-10)BACPT01813UniProtKB/TrEMBL G4NV96tRNA pseudouridine synthase B
BBacillus subtilis (strain 168)BACSU01724UniProtKB/Swiss-Prot TRUB_BACSUtRNA pseudouridine 55 synthase Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; PubMedId: 15987897; Product type e: enzyme
BBacillus thuringiensis (strain Al Hakam)BACAH03248UniProtKB/Swiss-Prot TRUB_BACAHtRNA pseudouridine synthase B
BBacillus thuringiensis subsp. finitimus (strain YBT-020)BACT003695UniProtKB/TrEMBL F0PQJ0tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BBacillus thuringiensis subsp. konkukian (strain 97-27)BACHK03490UniProtKB/Swiss-Prot TRUB_BACHKtRNA pseudouridine synthase B
BBacillus thuringiensis (strain BMB171)BACT103442ncbi logo ADH08285.1tRNA pseudouridine synthase B
BBacillus velezensis (strain DSM 23117 / BGSC 10A6 / FZB42)BACVZ01564UniProtKB/Swiss-Prot TRUB_BACVZTruB
BBacillus weihenstephanensis (strain KBAB4)BACWK03534UniProtKB/TrEMBL A9VT47tRNA pseudouridine synthase B pmp logo
BGeobacillus kaustophilus (strain HTA426)GEOKA01247UniProtKB/Swiss-Prot TRUB_GEOKAtRNA pseudouridine 5S synthase
BGeobacillus sp. (strain WCH70)GEOSW01031UniProtKB/TrEMBL C5D9D2tRNA pseudouridine synthase B pmp logo
BGeobacillus sp. (strain Y4.1MC1)GEOS002428UniProtKB/TrEMBL A0A0F6BPI6tRNA pseudouridine synthase B KEGG: gwc:GWCH70_1158 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BGeobacillus sp. (strain Y412MC61)GEOSY01943ncbi logo ACX78666.1tRNA pseudouridine synthase B
BGeobacillus thermodenitrificans (strain NG80-2)GEOTN01095UniProtKB/Swiss-Prot TRUB_GEOTNTRNA pseudouridine 55 synthase
BLysinibacillus sphaericus (strain C3-41)LYSSC01553UniProtKB/TrEMBL B1HR08tRNA pseudouridine synthase B pmp logo
BOceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)OCEIH01595UniProtKB/Swiss-Prot TRUB_OCEIHtRNA-pseudouridine 5S synthase CDS_ID OB1601
BGeobacillus thermoglucosidasius (strain C56-YS93)GEOTC02424ncbi logo AEH48542.1tRNA pseudouridine synthase B KEGG: gmc:GY4MC1_2641 tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; PFAM: Pseudouridine synthase II, TruB, N-terminal
BExiguobacterium antarcticum (strain B7)EXIAB01629UniProtKB/TrEMBL K0AD50tRNA pseudouridine synthase
BExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS201790UniProtKB/TrEMBL B1YI60tRNA pseudouridine synthase B pmp logo
BExiguobacterium sp. (strain ATCC BAA-1283 / AT1b)EXISA02937UniProtKB/TrEMBL C4L6J3tRNA pseudouridine synthase B pmp logo
BListeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)LISIN01343UniProtKB/Swiss-Prot TRUB_LISINtRNA pseudouridine synthase B
BListeria ivanovii (strain ATCC BAA-678 / PAM 55)LISIP01278UniProtKB/TrEMBL G2ZFN6Putative tRNA pseudouridine 55 synthase Highly similar to tRNA pseudouridine 55 synthase
BListeria monocytogenes serotype 1/2a (strain 08-5923)LISM201411ncbi logo ADB71261.1hypothetical protein
BListeria monocytogenes serotype 1/2a (strain 10403S)LISM401292UniProtKB/TrEMBL A0A0H3GBU6tRNA pseudouridine synthase B
BListeria monocytogenes serotype 4a (strain HCC23)LISMH01222ncbi logo ACK39589.1tRNA pseudouridine synthase B
BListeria monocytogenes serotype 4a (strain L99)LISML01384ncbi logo CAR84088.1tRNA pseudouridine synthase B
BListeria monocytogenes serotype 4a (strain M7)LISMM01409UniProtKB/TrEMBL A0A0E0UWD4tRNA pseudouridine synthase B
BListeria monocytogenes serotype 4b (strain CLIP80459)LISMC01310ncbi logo CAS05100.1Putative tRNA pseudouridine 55 synthase
BListeria monocytogenes serotype 4b (strain F2365)LISMF01329UniProtKB/Swiss-Prot TRUB_LISMFtRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)LISMO01323UniProtKB/Swiss-Prot TRUB_LISMOtRNA pseudouridine synthase B
BListeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954)LISSS01244ncbi logo CBH27395.1tRNA pseudouridine synthase B
BListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)LISW601343UniProtKB/Swiss-Prot TRUB_LISW6TruB protein
BBrevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)BREBN03369UniProtKB/TrEMBL C0ZF47tRNA pseudouridine synthase B pmp logo
BGeobacillus sp. (strain Y412MC10)GEOS404057UniProtKB/TrEMBL D3E6P4tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: pjd:Pjdr2_3404 tRNA pseudouridine synthase B
BPaenibacillus mucilaginosus (strain KNP414)PAEMK05614UniProtKB/TrEMBL F8F6Y6tRNA pseudouridine synthase B pmp logo
BPaenibacillus sp. (strain JDR-2)PAESJ03356UniProtKB/TrEMBL C6D2E9tRNA pseudouridine synthase B pmp logo
BSolibacillus silvestris (strain StLB046)SOLSS02939UniProtKB/TrEMBL F2F2S5pseudouridine synthase
BMacrococcus caseolyticus (strain JCSC5402)MACCJ00864UniProtKB/TrEMBL B9EBF8tRNA pseudouridine 5S synthase homolog pmp logo
BStaphylococcus aureus (strain 04-02981)STAA401217ncbi logo ADC37440.1tRNA pseudouridine synthase B
BStaphylococcus aureus (strain bovine RF122 / ET3-1)STAAB01129UniProtKB/Swiss-Prot TRUB_STAABtRNA-pseudouridine 5S synthase
BStaphylococcus aureus (strain COL)STAAC01259UniProtKB/Swiss-Prot TRUB_STAACtRNA pseudouridine 55 synthase identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BStaphylococcus aureus (strain ECT-R 2)STAAG01098ncbi logo CBX34507.1tRNA pseudouridine synthase B
BStaphylococcus aureus (strain ED98)STAAD01195ncbi logo ACY11151.1tRNA pseudouridine 55 synthase
BStaphylococcus aureus (strain JH1)STAA201319UniProtKB/Swiss-Prot TRUB_STAA2tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein KEGG: sav:SAV1271 tRNA pseudouridine 5S synthase
BStaphylococcus aureus (strain JH9)STAA901294UniProtKB/Swiss-Prot TRUB_STAA9tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BStaphylococcus aureus (strain JKD6008)STAAK01169ncbi logo ADL65271.1tRNA pseudouridine synthase B
BStaphylococcus aureus (strain JKD6159)STAAJ01105ncbi logo ADL23070.1putative tRNA pseudouridine synthase B
BStaphylococcus aureus (strain MRSA ST398 / isolate S0385)STAA501194UniProtKB/TrEMBL A0A0E0VNM0tRNA pseudouridine synthase B
BStaphylococcus aureus (strain MRSA252)STAAR01205UniProtKB/Swiss-Prot TRUB_STAARputative tRNA pseudouridine synthase B N-terminus is similar to N-terminal region of Escherichia coli tRNA pseudouridine synthase B trub or p35 or b3166 or z4527 or ecs4047 SW:TRUB_ECOLI (P09171) (314 aa) fasta scores: E(): 1e-25, 39.207% id in 227 aa. Similar to Bacillus halodurans tRNA pseudouridine synthase B BH2410 SW:TRUB_BACHD (Q9KA80) (304 aa) fasta scores: E(): 2.1e-49, 47.841% id in 301 aa
BStaphylococcus aureus (strain MSSA476)STAAS01210UniProtKB/Swiss-Prot TRUB_STAASputative tRNA pseudouridine synthase B Ortholog of S. aureus MRSA252 (BX571856) SAR1247
BStaphylococcus aureus (strain MW2)STAAW01154UniProtKB/Swiss-Prot TRUB_STAAWtRNA pseudouridine 5S synthase ORFID:MW1154
BStaphylococcus aureus (strain Mu3 / ATCC 700698)STAA101246UniProtKB/Swiss-Prot TRUB_STAA1tRNA pseudouridine 5S synthase
BStaphylococcus aureus (strain Mu50 / ATCC 700699)STAAM01252UniProtKB/Swiss-Prot TRUB_STAAMtRNA pseudouridine synthase B
BStaphylococcus aureus (strain N315)STAAN01133UniProtKB/Swiss-Prot TRUB_STAANtRNA pseudouridine 5S synthase ORFID:SA1114
BStaphylococcus aureus (strain NCTC 8325)STAA801173UniProtKB/Swiss-Prot TRUB_STAA8conserved hypothetical protein
BStaphylococcus aureus (strain Newman)STAAE01138UniProtKB/Swiss-Prot TRUB_STAAEtRNA pseudouridine synthase B
BStaphylococcus aureus (strain TCH60)STAAH01952ncbi logo ADQ77420.1tRNA pseudouridine synthase B
BStaphylococcus aureus (strain TW20 / 0582)STAA001240ncbi logo CBI49144.1Putative tRNA pseudouridine synthase B
BStaphylococcus aureus (strain USA300)STAA301139UniProtKB/Swiss-Prot TRUB_STAA3tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BStaphylococcus aureus (strain USA300 / TCH1516)STAAT01171UniProtKB/Swiss-Prot TRUB_STAATpseudouridylate synthase
BStaphylococcus aureus subsp. aureus (strain ED133)STAAF01218ncbi logo ADI97785.1tRNA pseudouridine synthase B
BStaphylococcus carnosus (strain TM300)STACT00903UniProtKB/TrEMBL B9DPD7Putative tRNA pseudouridine synthase B pmp logo
BStaphylococcus epidermidis (strain ATCC 12228)STAES00938UniProtKB/Swiss-Prot TRUB_STAEStRNA pseudouridine 5S synthase
BStaphylococcus epidermidis (strain ATCC 35984 / RP62A)STAEQ00814UniProtKB/Swiss-Prot TRUB_STAEQtRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BStaphylococcus haemolyticus (strain JCSC1435)STAHJ01606UniProtKB/Swiss-Prot TRUB_STAHJtRNA pseudouridine 5S synthase
BStaphylococcus lugdunensis (strain HKU09-01)STALH01532ncbi logo ADC87714.1tRNA pseudouridine synthase B
BStaphylococcus pseudintermedius (strain ED99)STAPE01405ncbi logo ADX76767.1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509, match to protein family HMM TIGR00431
BStaphylococcus pseudintermedius (strain HKU10-03)STAPH00998ncbi logo ADV05528.1tRNA pseudouridine synthase B tRNA Psi55
BStaphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)STAS101493UniProtKB/Swiss-Prot TRUB_STAS1tRNA pseudouridine 5S synthase similar to gi|27467866|ref|NP_764503.1| [Staphylococcus epidermidis ATCC 12228], percent identity 68 in 305 aa, BLASTP E(): e-118
BCarnobacterium sp. (strain 17-4)CARS101033UniProtKB/TrEMBL F4BQR0tRNA pseudouridine synthase B pmp logo
BEnterococcus faecalis (strain 62)ENTF601649ncbi logo ADX79963.1tRNA pseudouridine synthase B TIGR_role_id=168; COG:COG0130
BEnterococcus faecalis (strain ATCC 47077 / OG1RF)ENTFO01063ncbi logo AEA93751.1tRNA pseudouridine synthase B COG: COG0130; Pfam: PF01509; InterPro: IPR014780
BEnterococcus faecium (strain Aus0004)ENTFU01612ncbi logo AFC63795.1tRNA pseudouridine synthase B
BMelissococcus plutonius (strain ATCC 35311 / CIP 104052 / LMG 20360 / NCIMB 702443)MELPT01250UniProtKB/TrEMBL F3YB49tRNA pseudouridine synthase B pmp logo
BMelissococcus plutonius (strain DAT561)MELPD00634UniProtKB/TrEMBL H5T430tRNA pseudouridine synthase B GI:332686762
BTetragenococcus halophilus (strain DSM 20338 / JCM 20259 / NCIMB 9735 / NBRC 12172)TETHN01253UniProtKB/TrEMBL G4L7U5tRNA pseudouridine synthase TruB pmp logo
BLactobacillus acidophilus (strain 30SC)LACA301300ncbi logo ADZ07517.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BLactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)LACAC01175UniProtKB/Swiss-Prot TRUB_LACACtRNA pseudouridine synthase B TruB; COG0130 Pseudouridine synthase
BLactobacillus amylovorus (strain GRL 1118)LACAL01213UniProtKB/TrEMBL F2M0D2tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BLactobacillus brevis (strain ATCC 367 / JCM 1170)LACBA01246UniProtKB/Swiss-Prot TRUB_LACBAPseudouridine synthase
BLactobacillus buchneri (strain NRRL B-30929)LACBN00943UniProtKB/TrEMBL F4FUH8tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: lbr:LVIS_1333 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II
BLactobacillus casei (strain BD-II)LACCD01735UniProtKB/TrEMBL A0A125U8W2tRNA pseudouridine synthase B
BLactobacillus casei (strain BL23)LACCB01697UniProtKB/Swiss-Prot TRUB_LACCBtRNA pseudouridine synthase B
BLactobacillus casei (strain LC2W)LACCC01696ncbi logo AEA54069.1tRNA pseudouridine synthase B
BLactobacillus casei (strain Zhang)LACCZ01467ncbi logo ADK18788.1Pseudouridine synthase
BLactobacillus crispatus (strain ST1)LACCS01249UniProtKB/TrEMBL D5GY58tRNA pseudouridine synthase B
BLactobacillus delbrueckii subsp. bulgaricus (strain 2038)LACD201111UniProtKB/TrEMBL F0K310tRNA pseudouridine synthase B pmp logo
BLactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / JCM 1002 / NBRC 13953 / NCIMB 11778)LACDA01226UniProtKB/Swiss-Prot TRUB_LACDAPseudouridylate synthase
BLactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365)LACDB01027UniProtKB/Swiss-Prot TRUB_LACDBPseudouridine synthase
BLactobacillus delbrueckii subsp. bulgaricus (strain ND02)LACDN01231UniProtKB/TrEMBL E4SUW5tRNA pseudouridine synthase B
BLactobacillus fermentum (strain NBRC 3956 / LMG 18251)LACF300722UniProtKB/TrEMBL B2GBN9Pseudouridylate synthase
BLactobacillus gasseri (strain ATCC 33323 / DSM 20243 / JCM 1131 / NCIMB 11718 / AM63)LACGA00730UniProtKB/Swiss-Prot TRUB_LACGAPseudouridine synthase
BLactobacillus helveticus (strain DPC 4571)LACH401029UniProtKB/TrEMBL A8YVQ5tRNA pseudouridine synthase B pmp logo
BLactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)LACJO01266UniProtKB/Swiss-Prot TRUB_LACJOtRNA pseudouridine synthase B
BLactobacillus johnsonii (strain FI9785)LACJF00696UniProtKB/TrEMBL D0R3J2tRNA pseudouridine synthase B
BLactobacillus kefiranofaciens (strain ZW3)LACKZ00441ncbi logo AEG40139.1tRNA pseudouridine synthase B
BLactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 / KCTC 3260 / NRRL B-441)LACP301431UniProtKB/Swiss-Prot TRUB_LACP3Pseudouridine synthase
BLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)LACPL01697UniProtKB/Swiss-Prot TRUB_LACPLtRNA pseudouridine synthase B
BLactobacillus plantarum (strain JDM1)LACPJ01693ncbi logo ACT62583.1Pseudouridylate synthase
BLactobacillus plantarum (strain ST-III)LACPS01607ncbi logo ADN98838.1pseudouridylate synthase
BLactobacillus reuteri (strain ATCC 55730 / SD2112)LACRS01847UniProtKB/TrEMBL F8DP25tRNA pseudouridine synthase B COG: COG0130 pmp logo
BLactobacillus reuteri (strain DSM 20016)LACRD00677UniProtKB/Swiss-Prot TRUB_LACRDtRNA pseudouridine synthase B
BLactobacillus reuteri (strain JCM 1112)LACRJ00661ncbi logo BAG25190.1pseudouridylate synthase
BLactobacillus rhamnosus (strain ATCC 53103 / GG)LACRG01560ncbi logo CAR87504.1tRNA pseudouridine synthase B
BLactobacillus rhamnosus (strain Lc 705)LACRL01560ncbi logo CAR90429.1tRNA pseudouridine synthase B
BLactobacillus ruminis (strain ATCC 27782 / RF3)LACRR00935UniProtKB/TrEMBL G2SNW7tRNA pseudouridine synthase B
BLactobacillus sakei subsp. sakei (strain 23K)LACSS01228UniProtKB/Swiss-Prot TRUB_LACSStRNA-specific pseudouridylate synthase (tRNA pseudouridine synthase B)
BLactobacillus salivarius (strain CECT 5713)LACSC00428ncbi logo ADJ78792.1tRNA pseudouridine synthase B
BLactobacillus salivarius (strain UCC118)LACS100555UniProtKB/Swiss-Prot TRUB_LACS1tRNA pseudouridine synthase B COG0130 [J] Pseudouridine synthase
BLactobacillus sanfranciscensis (strain TMW 1.1304)LACSM00717UniProtKB/TrEMBL G2KUB4tRNA pseudouridine synthase B pmp logo
BPediococcus claussenii (strain ATCC BAA-344 / DSM 14800 / JCM 18046 / KCTC 3811 / P06)PEDCP00906UniProtKB/TrEMBL G8PDB1tRNA pseudouridine synthase B pmp logo
BPediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w)PEDPA00840UniProtKB/Swiss-Prot TRUB_PEDPAPseudouridine synthase
BLeuconostoc carnosum (strain JB16)LEUCJ00636UniProtKB/TrEMBL K0D9N1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BLeuconostoc citreum (strain KM20)LEUCK01083UniProtKB/TrEMBL B1MZH0tRNA pseudouridine synthase B pmp logo
BLeuconostoc gelidum (strain JB7)LEUGJ00773UniProtKB/TrEMBL J9YH69tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BLeuconostoc gelidum subsp. gasicomitatum (strain DSM 15947 / CECT 5767 / JCM 12535 / LMG 18811 / TB1-10)LEUGG00802ncbi logo CBL91451.1tRNA pseudouridine synthase B
BLeuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523)LEUMM01271UniProtKB/TrEMBL Q03WH8Pseudouridine synthase pmp logo
BLeuconostoc sp. (strain C2)LEUS200585ncbi logo AEJ30649.1pseudouridylate synthase COG0130 Pseudouridine synthase
BOenococcus oeni (strain ATCC BAA-331 / PSU-1)OENOB01171UniProtKB/Swiss-Prot TRUB_OENOBPseudouridine synthase
BWeissella koreensis (strain KACC 15510)WEIKK01139UniProtKB/TrEMBL F8I1J4tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BLactococcus garvieae (strain ATCC 49156 / DSM 6783 / NCIMB 13208 / YT-3)LACGT01266ncbi logo BAK58797.1tRNA pseudouridine synthase B
BLactococcus garvieae (strain Lg2)LACGL01283UniProtKB/TrEMBL F9VEL4tRNA pseudouridine synthase B
BLactococcus lactis subsp. cremoris (strain MG1363)LACLM01354UniProtKB/Swiss-Prot TRUB_LACLMTRNA pseudouridine synthase B
BLactococcus lactis subsp. cremoris (strain NZ9000)LACLN01347ncbi logo ADJ60421.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BLactococcus lactis subsp. cremoris (strain SK11)LACLS01087UniProtKB/Swiss-Prot TRUB_LACLSPseudouridine synthase
BLactococcus lactis subsp. lactis (strain CV56)LACLV01047ncbi logo ADZ63746.1tRNA pseudouridine synthase B
BLactococcus lactis subsp. lactis (strain IL1403)LACLA01098UniProtKB/Swiss-Prot TRUB_LACLAtRNA pseudouridine synthase B
BLactococcus lactis subsp. lactis (strain KF147)LACLK01138UniProtKB/TrEMBL D2BQM8tRNA pseudouridine synthase B
BStreptococcus agalactiae serotype III (strain NEM316)STRA300935UniProtKB/Swiss-Prot TRUB_STRA3tRNA pseudouridine synthase B
BStreptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700)STRA100978UniProtKB/Swiss-Prot TRUB_STRA1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BStreptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)STRA500963UniProtKB/Swiss-Prot TRUB_STRA5tRNA pseudouridine synthase B identified by match to PFAM protein family HMM PF01509
BStreptococcus agalactiae serotype Ia (strain GD201008-001)STRA200928ncbi logo AFS45745.1tRNA pseudouridine synthase B
BStreptococcus dysgalactiae subsp. equisimilis (strain ATCC 12394 / D166B)STRED01100ncbi logo ADX24664.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BStreptococcus dysgalactiae subsp. equisimilis (strain GGS_124)STRDG01004UniProtKB/TrEMBL C5WGQ4tRNA pseudouridine synthase B
BStreptococcus equi subsp. equi (strain 4047)STRE400939UniProtKB/TrEMBL C0M987tRNA pseudouridine synthase B
BStreptococcus equi subsp. zooepidemicus (strain ATCC 35246 / C74-63)STREC00954ncbi logo AEJ25196.1tRNA pseudouridine synthase B
BStreptococcus equi subsp. zooepidemicus (strain H70)STRS701054UniProtKB/TrEMBL C0MG82tRNA pseudouridine synthase B Ortholog of S. equi 4047 (FM204883) SEQ1036
BStreptococcus equi subsp. zooepidemicus (strain MGCS10565)STREM00863UniProtKB/TrEMBL B4U2P6tRNA pseudouridine synthase B TruB pmp logo
BStreptococcus gallolyticus (strain ATCC 43143 / F-1867)STRG101142UniProtKB/TrEMBL F5X158tRNA pseudouridine synthase B functional classification: COG0130(J)
BStreptococcus gallolyticus (strain ATCC BAA-2069)STRG201137ncbi logo CBZ48321.1tRNA pseudouridine synthase B
BStreptococcus gallolyticus (strain UCN34)STRG301151ncbi logo CBI13653.1Putative tRNA pseudouridine synthase B
BStreptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)STRGC01016UniProtKB/Swiss-Prot TRUB_STRGCtRNA pseudouridine synthase B
BStreptococcus infantarius (strain CJ18)STRIC00929UniProtKB/TrEMBL H6PBI0tRNA pseudouridine synthase B pmp logo
BStreptococcus intermedius (strain JTH08)STRIJ01051ncbi logo BAM23705.1tRNA pseudouridine synthase B
BStreptococcus macedonicus (strain ACA-DC 198)STRMD01075UniProtKB/TrEMBL H2A6L2tRNA pseudouridine synthase
BStreptococcus mitis (strain B6)STRM600930UniProtKB/TrEMBL D3H8R4tRNA pseudouridine synthase B
BStreptococcus mutans serotype c (strain ATCC 700610 / UA159)STRMU01040UniProtKB/Swiss-Prot TRUB_STRMUtRNA pseudouridine synthase B
BStreptococcus mutans serotype c (strain NN2025)STRMN00897ncbi logo BAH87925.1putative tRNA pseudouridine 5S synthase similar to (nr):(gi|24379575|ref|NP_721530.1|), BLASTP E():7.26e-163, 99.7% identity in 293 aa overlap.
BStreptococcus oralis (strain Uo5)STROU00787UniProtKB/TrEMBL F2QCZ6tRNA pseudouridine synthase B
BStreptococcus parauberis (strain KCTC 11537)STRPW00805ncbi logo AEF25253.1tRNA pseudouridine synthase B
BStreptococcus pasteurianus (strain ATCC 43144 / JCM 5346 / CDC 1723-81)STRPX01018UniProtKB/TrEMBL F5X6P6tRNA pseudouridine synthase B functional classification: COG0130(J)
BStreptococcus pneumoniae (strain 670-6B)STRZ601039ncbi logo ADM91129.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae (strain 70585)STRP701166UniProtKB/TrEMBL C1C7H9tRNA pseudouridine synthase B
BStreptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1)STRPJ01045ncbi logo CAR68920.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae (strain ATCC BAA-255 / R6)STRR601087UniProtKB/Swiss-Prot TRUB_STRR6tRNA pseudouridine 5S synthase
BStreptococcus pneumoniae (strain CGSP14)STRPS01074UniProtKB/TrEMBL B2IPR9tRNA pseudouridine synthase B pmp logo
BStreptococcus pneumoniae (strain Hungary19A-6)STRPI01209UniProtKB/TrEMBL B1IC12tRNA pseudouridine synthase B pmp logo
BStreptococcus pneumoniae (strain JJA)STRZJ01065UniProtKB/TrEMBL C1CEH3tRNA pseudouridine synthase B pmp logo
BStreptococcus pneumoniae (strain P1031)STRZP01142ncbi logo ACO20793.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae (strain ST556)STRET01014ncbi logo AFC94684.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae (strain Taiwan19F-14)STRZT00933ncbi logo ACO23161.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae serotype 1 (strain INV104)STRZI01029ncbi logo CBW36723.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae serotype 14 (strain INV200)STRZN01012ncbi logo CBW34654.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae serotype 19F (strain G54)STRP401081ncbi logo ACF56655.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)STRP201005UniProtKB/Swiss-Prot TRUB_STRP2tRNA pseudouridine synthase B equivalent gene in S.pneumoniae TIGR4 = SP1212; equivalent gene in S.pneumoniae R6 = spr1092; identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BStreptococcus pneumoniae serotype 3 (strain OXC141)STRZO01077ncbi logo CBW32741.1tRNA pseudouridine synthase B
BStreptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)STRPN01133UniProtKB/Swiss-Prot TRUB_STRPNtRNA pseudouridine synthase B
BStreptococcus pneumoniae serotype A19 (strain TCH8431)STRP001280UniProtKB/TrEMBL D6ZSC8tRNA pseudouridine synthase B pmp logo
BStreptococcus pseudopneumoniae (strain IS7493)STRES01161UniProtKB/TrEMBL G0I9N5tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BStreptococcus pyogenes serotype M1STRP100957UniProtKB/Swiss-Prot TRUB_STRP1tRNA pseudouridine synthase B pmp logo
BStreptococcus pyogenes serotype M12 (strain MGAS2096)STRPB01008UniProtKB/Swiss-Prot TRUB_STRPBtRNA pseudouridine synthase B
BStreptococcus pyogenes serotype M12 (strain MGAS9429)STRPC01054UniProtKB/Swiss-Prot TRUB_STRPCtRNA pseudouridine synthase B
BStreptococcus pyogenes serotype M18 (strain MGAS8232)STRP800973UniProtKB/Swiss-Prot TRUB_STRP8putative tRNA pseudouridine 55 synthase best blastp match gb|AAK34106.1| (AE006564) putative tRNA pseudouridine 55 synthase [Streptococcus pyogenes M1 GAS]
BStreptococcus pyogenes serotype M2 (strain MGAS10270)STRPD01053UniProtKB/Swiss-Prot TRUB_STRPDtRNA pseudouridine synthase B
BStreptococcus pyogenes serotype M28 (strain MGAS6180)STRPM00928UniProtKB/Swiss-Prot TRUB_STRPMtRNA pseudouridine synthase B
BStreptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)STRP300885UniProtKB/Swiss-Prot TRUB_STRP3tRNA pseudouridine synthase B
BStreptococcus pyogenes serotype M3 (strain SSI-1)STRPQ01078UniProtKB/Swiss-Prot TRUB_STRPQputative tRNA pseudouridine 55 synthase similar to GB:AAK34106.1 (AE006564) percent identity 99 in 294 aa
BStreptococcus pyogenes serotype M4 (strain MGAS10750)STRPF01099UniProtKB/Swiss-Prot TRUB_STRPFtRNA pseudouridine synthase B
BStreptococcus pyogenes serotype M49 (strain NZ131)STRPZ00932UniProtKB/TrEMBL A0A0H3BZ31tRNA pseudouridine 55 synthase pmp logo
BStreptococcus pyogenes serotype M5 (strain Manfredo)STRPG00811UniProtKB/Swiss-Prot TRUB_STRPGTRNA pseudouridine synthase B
BStreptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)STRP600944UniProtKB/Swiss-Prot TRUB_STRP6tRNA pseudouridine synthase B
BStreptococcus salivarius (strain 57.I)STRE500960UniProtKB/TrEMBL F8HD43tRNA pseudouridine synthase B
BStreptococcus salivarius (strain CCHSS3)STREH00939UniProtKB/TrEMBL F8LIZ8tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
BStreptococcus salivarius (strain JIM8777)STRE801018UniProtKB/TrEMBL F8LPZ6tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
BStreptococcus sanguinis (strain SK36)STRSV00885UniProtKB/Swiss-Prot TRUB_STRSVTRNA pseudouridine synthase B, putative
BStreptococcus suis (strain 05ZYH33)STRSY01102UniProtKB/TrEMBL A4VVE1Pseudouridine synthase
BStreptococcus suis (strain BM407)STRS400804UniProtKB/TrEMBL A0A0H3N3S0tRNA pseudouridine synthase B
BStreptococcus suis (strain GZ1)STRGZ00963UniProtKB/TrEMBL D5AHW9tRNA pseudouridine synthase B pmp logo
BStreptococcus suis (strain JS14)STREJ01039ncbi logo ADV70160.1tRNA pseudouridine synthase B
BStreptococcus suis (strain P1/7)STRSE00913ncbi logo CAR46022.1tRNA pseudouridine synthase B
BStreptococcus suis (strain SC84)STRSX00990ncbi logo CAZ51776.1tRNA pseudouridine synthase B
BStreptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)STRT200915UniProtKB/Swiss-Prot TRUB_STRT2tRNA pseudouridine synthase B
BStreptococcus thermophilus (strain ATCC BAA-491 / LMD-9)STRTD00806ncbi logo ABJ66210.1Pseudouridine synthase
BStreptococcus thermophilus (strain CNRZ 1066)STRT100943UniProtKB/Swiss-Prot TRUB_STRT1tRNA pseudouridine synthase B
BStreptococcus thermophilus (strain ND03)STRTN00918ncbi logo ADQ63004.1tRNA pseudouridine synthase B
BStreptococcus uberis (strain ATCC BAA-854 / 0140J)STRU000950UniProtKB/TrEMBL B9DUE9tRNA pseudouridine synthase B pmp logo
BAlkaliphilus metalliredigens (strain QYMF)ALKMQ02440UniProtKB/TrEMBL A6TRK4tRNA pseudouridine synthase B pmp logo
BAlkaliphilus oremlandii (strain OhILAs)ALKOO01501UniProtKB/Swiss-Prot TRUB_ALKOOtRNA pseudouridine synthase B
BArthromitus sp. (strain SFB-mouse-Japan)ARTSS00729UniProtKB/TrEMBL F9VJP1tRNA pseudouridine synthase B pmp logo
BClostridium botulinum (strain H04402 065 / Type A5)CLOB002401ncbi logo CBZ04250.1tRNA pseudouridine synthase B
BClostridium botulinum (strain ATCC 19397 / Type A)CLOB102180ncbi logo ABS33508.1tRNA pseudouridine synthase B
BClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)CLOBH02407UniProtKB/TrEMBL A5I4J0Putative tRNA pseudouridine synthase B pmp logo
BClostridium botulinum (strain Kyoto / Type A2)CLOBJ02531UniProtKB/TrEMBL C1FS56tRNA pseudouridine synthase B
BClostridium botulinum (strain Loch Maree / Type A3)CLOBM02391UniProtKB/TrEMBL B1KWK4tRNA pseudouridine synthase B pmp logo
BClostridium botulinum (strain 657 / Type Ba4)CLOB602443ncbi logo ACQ53589.1tRNA pseudouridine synthase B
BClostridium botulinum (strain Okra / Type B1)CLOBK02332UniProtKB/TrEMBL B1II46tRNA pseudouridine synthase B pmp logo
BClostridium botulinum (strain 230613 / Type F)CLOB202264ncbi logo ADG00118.1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BClostridium botulinum (strain Langeland / NCTC 10281 / Type F)CLOBL02344UniProtKB/Swiss-Prot TRUB_CLOBLtRNA pseudouridine synthase B
BClostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)CLOC701723UniProtKB/TrEMBL D9SKN9tRNA pseudouridine synthase B KEGG: cno:NT01CX_2133 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BClostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)CLOK501379UniProtKB/Swiss-Prot TRUB_CLOK5TruB
BClostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC)CLOLD01257UniProtKB/TrEMBL D8GS33tRNA pseudouridine synthase B pmp logo
BClostridium novyi (strain NT)CLONN01221UniProtKB/Swiss-Prot TRUB_CLONNtRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BClostridium perfringens (strain 13 / Type A)CLOPE01683UniProtKB/Swiss-Prot TRUB_CLOPEtRNA pseudouridine synthase B
BClostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)CLOP101893UniProtKB/Swiss-Prot TRUB_CLOP1tRNA pseudouridine synthase B identified by similarity to SP:Q9WZW0; match to protein family HMM PF01509; match to protein family HMM TIGR00431
BClostridium perfringens (strain SM101 / Type A)CLOPS01608UniProtKB/Swiss-Prot TRUB_CLOPStRNA pseudouridine synthase b identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BClostridium sp. (strain SY8519)CLOSS02316UniProtKB/TrEMBL F7V6C2pseudouridine synthase pmp logo
BClostridium tetani (strain Massachusetts / E88)CLOTE01114UniProtKB/Swiss-Prot TRUB_CLOTEtRNA pseudouridine synthase B
BAcetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1)ACEWD01901UniProtKB/TrEMBL H6LJX3tRNA pseudouridine synthase B pmp logo
BEubacterium limosum (strain KIST612)EUBLK02374UniProtKB/TrEMBL E3GNW6hypothetical protein pmp logo
BEubacterium eligens (strain ATCC 27750 / VPI C15-48)EUBE200852UniProtKB/TrEMBL C4Z5P0tRNA pseudouridine synthase B pmp logo
BHeliobacterium modesticaldum (strain ATCC 51547 / Ice1)HELMI02159UniProtKB/Swiss-Prot TRUB_HELMItRNA pseudouridine synthase b
BButyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316)BUTPB00954UniProtKB/TrEMBL E0S1N6tRNA pseudouridine synthase B pmp logo
BClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)CLOSW02853UniProtKB/TrEMBL D9R781tRNA pseudouridine synthase B KEGG: ere:EUBREC_1940 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BLachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)LACP702729UniProtKB/Swiss-Prot TRUB_LACP7tRNA pseudouridine synthase B
BRoseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183)ROSHA01674UniProtKB/TrEMBL G2T333tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BAgathobacter rectalis (strain ATCC 33656 / DSM 3377 / JCM 17463 / KCTC 5835 / VPI 0990)AGARV01801UniProtKB/TrEMBL C4ZBF1tRNA pseudouridine synthase B
BOscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20)OSCVS03897UniProtKB/TrEMBL G4KZ43tRNA pseudouridine synthase pmp logo
BDesulforudis audaxviator (strain MP104C)DESAP00859UniProtKB/TrEMBL B1I388tRNA pseudouridine synthase B pmp logo
BDesulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1)DESDL02375UniProtKB/TrEMBL L0FAN7tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain)
BDesulfitobacterium hafniense (strain DCB-2 / DSM 10664)DESHD03592UniProtKB/TrEMBL B8FR03tRNA pseudouridine synthase B pmp logo
BDesulfitobacterium hafniense (strain Y51)DESHY02481UniProtKB/TrEMBL Q24UI9hypothetical protein similarity to COG0130 Pseudouridine synthase(Evalue: 4E-55) pmp logo
BDesulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4)DESAJ03266UniProtKB/TrEMBL I4D9E8tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BDesulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10)DESMD03380UniProtKB/TrEMBL J7J3E6tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BDesulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628)DESOD04238UniProtKB/TrEMBL G7WC51tRNA pseudouridine 55 synthase PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BDesulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644)DESAS02923UniProtKB/TrEMBL C8W4P1tRNA pseudouridine synthase B pmp logo
BDesulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17)DESK702407UniProtKB/TrEMBL F6CM97tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: pth:PTH_1272 pseudouridine synthase; PFAM: Pseudouridine synthase II, TruB, N-terminal pmp logo
BDesulfotomaculum nigrificans (strain DSM 14880 / VKM B-2319 / CO-1-SRB)DESCC01411UniProtKB/TrEMBL F6B626tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: drm:Dred_1954 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; Pseudouridine synthase/archaeosine transglycosylase
BDesulfotomaculum reducens (strain MI-1)DESRM01871UniProtKB/TrEMBL A4J5W9tRNA pseudouridine synthase B pmp logo
BDesulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL)DESRL01827UniProtKB/TrEMBL F6DUM3tRNA pseudouridine synthase B KEGG: drm:Dred_1954 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; PUA domain containing protein pmp logo
BPelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)PELTS01262UniProtKB/Swiss-Prot TRUB_PELTSPseudouridine synthase
BSyntrophobotulus glycolicus (strain DSM 8271 / FlGlyR)SYNGF02103UniProtKB/TrEMBL F0SU14tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501: IPR014780; KEGG: dsy:DSY2514 hypothetical protein; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BThermincola potens (strain JR)THEPJ01318UniProtKB/TrEMBL D5XF16tRNA pseudouridine synthase B KEGG: dae:Dtox_3185 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; PUA domain containing protein pmp logo
BAcetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654)ACESD01675UniProtKB/TrEMBL E3PSF3tRNA pseudouridine synthase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12427942, 96079944; Product type e : enzyme pmp logo
BPeptoclostridium difficile (strain 630)PEPD601349UniProtKB/Swiss-Prot TRUB_PEPD6transfer RNA pseudouridine synthase B
BPeptoclostridium difficile (strain R20291)PEPDR01155UniProtKB/TrEMBL C9YKQ2tRNA pseudouridine synthase B
BEthanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3)ETHHY02643UniProtKB/TrEMBL E6U8F3tRNA pseudouridine synthase B KEGG: bpd:BURPS668_1742 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BClostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372)CLOTH00947UniProtKB/TrEMBL A3DE41TRNA pseudouridine synthase B pmp logo
BClostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8)CLOTL01180ncbi logo ADU74292.1tRNA pseudouridine synthase B KEGG: amt:Amet_2670 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE00447UniProtKB/TrEMBL B8I6F0tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: cth:Cthe_0988 tRNA pseudouridine synthase B pmp logo
BClostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45)CLOCD02181UniProtKB/TrEMBL G8LZT5tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BRuminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7)RUMA702833UniProtKB/TrEMBL E6UE92tRNA pseudouridine synthase B KEGG: ere:EUBREC_1940 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B pmp logo
BRuminococcus champanellensis (strain DSM 18848 / JCM 17042 / KCTC 15320 / 18P13)RUMC100379UniProtKB/TrEMBL D4LAM7tRNA pseudouridine 55 synthase pmp logo
BSymbiobacterium thermophilum (strain T / IAM 14863)SYMTH01515UniProtKB/Swiss-Prot TRUB_SYMTHtRNA pseudouridine synthase B
BSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)SYNWW00845UniProtKB/Swiss-Prot TRUB_SYNWWPseudouridylate synthase
BSyntrophothermus lipocalidus (strain DSM 12680 / TGB-C1)SYNLT00975UniProtKB/TrEMBL D7CM50tRNA pseudouridine synthase B pmp logo
BClostridium acidurici (strain ATCC 7906 / CIP 104303 / DSM 604 / NCIMB 10678 / BCRC 14475 / NCCB 46094 / 9a)CLOA901475UniProtKB/TrEMBL K0B0G7tRNA pseudouridine synthase B pmp logo
BHalanaerobium hydrogeniformansHALHG01218UniProtKB/TrEMBL E4RKT3tRNA pseudouridine synthase B KEGG: hor:Hore_07870 tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BHalanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL)HALPG00951UniProtKB/TrEMBL E3DRZ1tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501:IPR014780; KEGG: hor:Hore_07870 tRNA pseudouridine 55 synthase; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)HALOH00768UniProtKB/TrEMBL B8CW75tRNA pseudouridine 55 synthase pmp logo
BNatranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)NATTJ01403UniProtKB/TrEMBL B2A3A0tRNA pseudouridine synthase B pmp logo
BCaldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)CALS401263UniProtKB/Swiss-Prot TRUB_CALS4tRNA pseudouridine synthase B
BCarboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901)CARHZ01707UniProtKB/Swiss-Prot TRUB_CARHZtRNA pseudouridine synthase B identified by similarity to SP:P32732; match to protein family HMM PF01509; match to protein family HMM TIGR00431
BMoorella thermoacetica (strain ATCC 39073 / JCM 9320)MOOTA01012UniProtKB/Swiss-Prot TRUB_MOOTAtRNA pseudouridine synthase B
BTepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1)TEPAE00071ncbi logo AEE91419.1tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: toc:Toce_1234 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II
BThermoanaerobacter italicus (strain DSM 9252 / Ab9)THEIA01106UniProtKB/TrEMBL D3T916tRNA pseudouridine synthase B pmp logo
BThermoanaerobacter mathranii subsp. mathranii (strain DSM 11426 / CIP 108742 / A3)THEM301161UniProtKB/TrEMBL D7AP34tRNA pseudouridine synthase B pmp logo
BThermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)THEP301148UniProtKB/TrEMBL B0K9P7tRNA pseudouridine synthase B pmp logo
BThermoanaerobacter sp. (strain X513)THESX01162ncbi logo ADN54861.1tRNA pseudouridine synthase B KEGG: tpd:Teth39_1206 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B
BThermoanaerobacter sp. (strain X514)THEPX01580UniProtKB/TrEMBL B0K1D3tRNA pseudouridine synthase B pmp logo
BCaldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)CALBD00978UniProtKB/TrEMBL B9MR51tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: csc:Csac_2067 tRNA pseudouridine synthase B
BCaldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108)CALH101613UniProtKB/TrEMBL E4QCA5tRNA pseudouridine synthase B KEGG: ate:Athe_1054 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BCaldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B)CALKI00947UniProtKB/TrEMBL E4S5M7tRNA pseudouridine synthase B KEGG: ate:Athe_1054 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BCaldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)CALK201566UniProtKB/TrEMBL E4SFG7tRNA pseudouridine synthase B KEGG: ate:Athe_1054 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BCaldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47)CALOO01375UniProtKB/TrEMBL D9TL78tRNA pseudouridine synthase B KEGG: ate:Athe_1054 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BCaldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL)CALOW00810UniProtKB/TrEMBL E4Q6E0tRNA pseudouridine synthase B
BCaldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331)CALS801940UniProtKB/Swiss-Prot TRUB_CALS8TRNA pseudouridine synthase B
BThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)THESW01792UniProtKB/TrEMBL I3VWE0tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: txy:Thexy_1283 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type pmp logo
BThermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)THEXL01234UniProtKB/TrEMBL F6BFH7tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: ttm:Tthe_1406 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal pmp logo
BThermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P)THEOJ01172UniProtKB/TrEMBL D9S3L3tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501:IPR014780; KEGG: cth:Cthe_0988 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BMahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON)MAHA501005UniProtKB/TrEMBL F4A2Q6tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501: IPR002478: IPR014780; KEGG: cth:Cthe_0988 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BCoprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)COPPD00899UniProtKB/TrEMBL B5Y924tRNA pseudouridine synthase B pmp logo
BErysipelothrix rhusiopathiae (strain Fujisawa)ERYRF00878UniProtKB/TrEMBL F5WT67tRNA pseudouridine synthase B
BAcidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4)ACIFV01295UniProtKB/TrEMBL D2RKW1tRNA pseudouridine synthase B pmp logo
BAcidaminococcus intestini (strain RyC-MR95)ACIIR01532UniProtKB/TrEMBL G4Q2Z7tRNA pseudouridine synthase B COG0130 pmp logo
BSelenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421)SELRL01588UniProtKB/TrEMBL I0GRD3putative tRNA pseudouridine synthase B pmp logo
BSelenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28)SELS301111UniProtKB/TrEMBL C9LTT3tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR014780:IPR002501; KEGG: tte:TTE1390 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; IMG reference gene:2504586629; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BVeillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3)VEIPT00781UniProtKB/TrEMBL D1BM63tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: bha:BH2410 tRNA pseudouridine 5S synthase
BAnaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1)ANAPD00596UniProtKB/TrEMBL C7RGP3tRNA pseudouridine synthase B pmp logo
BFusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)FUSNN01194UniProtKB/Swiss-Prot TRUB_FUSNNtRNA pseudouridine synthase B
BIlyobacter polytropus (strain DSM 2926 / CuHBu1)ILYPC00436UniProtKB/TrEMBL E3HB81tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR020103:IPR002501:IPR014780; KEGG: fnu:FN0635 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: C3WAF1 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSebaldella termitidis (strain ATCC 33386 / NCTC 11300)SEBTE02261UniProtKB/TrEMBL D1AL32tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: noc:Noc_2118 tRNA pseudouridine synthase B pmp logo
BStreptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901)STRM900699UniProtKB/TrEMBL D1AY31tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: asa:ASA_1012 tRNA pseudouridine 55 synthase pmp logo
BGemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)GEMAT01555UniProtKB/TrEMBL C1A8P0tRNA pseudouridine synthase B protein synonym: Psi55 synthase protein synonym: tRNA pseudouridine 55 synthase protein synonym: uracil hydrolyase pmp logo
BIgnavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16)IGNAJ00634UniProtKB/TrEMBL I0AH96tRNA pseudouridine synthase B pmp logo
BMelioribacter roseus (strain JCM 17771 / P3M-2)MELRP01705UniProtKB/TrEMBL I6ZSF6tRNA pseudouridine synthase B pmp logo
BLeptospirillum ferrooxidans (strain C2-3)LEPFC01522UniProtKB/TrEMBL I0IPR1putative tRNA pseudouridine synthase B pmp logo
BLeptospirillum ferriphilum (strain ML-04)LEPFM01019UniProtKB/TrEMBL J9Z9X4putative pseudouridine synthase pmp logo
BThermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)THEYD00544UniProtKB/TrEMBL B5YJI4tRNA pseudouridine synthase B pmp logo
BIsosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B)ISOPI00037UniProtKB/TrEMBL E8R4P3tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR014780: IPR002501; KEGG: sti:Sthe_1260 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: TRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSingulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)SINAD04634UniProtKB/TrEMBL L0DKK6tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); tRNA Pseudouridine synthase II, C terminal; TIGRFAM: tRNA pseudouridine 55 synthase
BPirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128)PIRSD02773UniProtKB/TrEMBL D2R7P9tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: rce:RC1_2916 tRNA pseudouridine synthase B pmp logo
BPlanctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)PLAL202200UniProtKB/TrEMBL D5SMZ8 pmp logo
BRubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)RUBBR02372UniProtKB/TrEMBL F0SNV3tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR014780: IPR002501; KEGG: psl:Psta_2809 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: TRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BAcidithiobacillus caldus (strain SM-1)ACICS02350UniProtKB/TrEMBL F9ZRU5tRNA pseudouridine synthase B pmp logo
BAcidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455)ACIF200373UniProtKB/TrEMBL B7J4D6tRNA pseudouridine synthase B pmp logo
BAcidithiobacillus ferrooxidans (strain ATCC 53993)ACIF500524UniProtKB/TrEMBL B5EMD2tRNA pseudouridine synthase B pmp logo
BAsticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)ASTEC00180UniProtKB/TrEMBL E8RNX2tRNA pseudouridine synthase B KEGG: pzu:PHZ_c3434 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BBrevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81)BRESC00215UniProtKB/TrEMBL D9QJ06tRNA pseudouridine synthase B pmp logo
BCaulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059)CAUST00032UniProtKB/TrEMBL D5VDL6tRNA pseudouridine synthase B
BCaulobacter sp. (strain K31)CAUSK00039UniProtKB/Swiss-Prot TRUB_CAUSKtRNA pseudouridine synthase B
BCaulobacter crescentus (strain ATCC 19089 / CB15)CAUCR00036UniProtKB/Swiss-Prot TRUB_CAUCRtRNA pseudouridine synthase B
BCaulobacter crescentus (strain NA1000 / CB15N)CAUCN00035UniProtKB/TrEMBL A0A0H3C5T2tRNA pseudouridine synthase B pmp logo
BPhenylobacterium zucineum (strain HLK1)PHEZH03419UniProtKB/TrEMBL B4RC50tRNA pseudouridine synthase B pmp logo
BMagnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1)MAGMM03553UniProtKB/TrEMBL A0LE16tRNA pseudouridine synthase B KEGG: mag:amb4115 pseudouridine synthase TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)PARBH00896UniProtKB/TrEMBL E0TFQ9tRNA pseudouridine synthase B pmp logo
BPelagibacter sp. (strain IMCC9063)PELSM00339UniProtKB/TrEMBL F2I047tRNA pseudouridine synthase B pmp logo
BBartonella clarridgeiae (strain CIP 104772 / 73)BARC700148UniProtKB/TrEMBL E6YG50tRNA pseudouridine synthase B pmp logo
BBartonella grahamii (strain as4aup)BARGA00197UniProtKB/TrEMBL C6ABM3tRNA pseudouridine synthase B pmp logo
BBartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1)BARHE00207UniProtKB/Swiss-Prot TRUB_BARHEtRNA pseudouridine synthase B
BBartonella quintana (strain Toulouse)BARQU00197UniProtKB/Swiss-Prot TRUB_BARQUtRNA pseudouridine synthase B
BBartonella tribocorum (strain CIP 105476 / IBS 506)BART100205UniProtKB/Swiss-Prot TRUB_BART1tRNA pseudouridine synthase B hypothetical protein
BBartonella vinsonii subsp. berkhoffii (strain Winnie)BARVW00187ncbi logo AGF75345.1tRNA pseudouridine synthase B
BBeijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII901026UniProtKB/TrEMBL B2IIJ5tRNA pseudouridine synthase B pmp logo
BMethylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2)METSB02237UniProtKB/TrEMBL B8EIA5tRNA pseudouridine synthase B pmp logo
BBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)BRADU00779UniProtKB/Swiss-Prot TRUB_BRADUtRNA pseudouridine synthase B
BBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB00055UniProtKB/TrEMBL A5E868TRNA pseudouridine synthase B pmp logo
BBradyrhizobium sp. (strain ORS 278)BRASO00054UniProtKB/TrEMBL A4YJF1TRNA pseudouridine synthase B
BNitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255)NITWN00025UniProtKB/Swiss-Prot TRUB_NITWNtRNA pseudouridine synthase B
BOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)OLICO00498UniProtKB/TrEMBL B6JCS0tRNA pseudouridine synthase B pmp logo
BOligotropha carboxidovorans (strain OM4)OLICM00029ncbi logo AEI01189.1tRNA pseudouridine synthase B
BRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)RHOPA00435UniProtKB/Swiss-Prot TRUB_RHOPAtRNA pseudouridine synthase B
BRhodopseudomonas palustris (strain BisA53)RHOP500193UniProtKB/TrEMBL Q07V80tRNA pseudouridine synthase B KEGG: rpd:RPD_0229 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BRhodopseudomonas palustris (strain BisB5)RHOPS00226UniProtKB/TrEMBL Q13EM0tRNA pseudouridine synthase B pmp logo
BRhodopseudomonas palustris (strain DX-1)RHOPX00185UniProtKB/TrEMBL E6VH58tRNA pseudouridine synthase B KEGG: nwi:Nwi_0026 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BRhodopseudomonas palustris (strain HaA2)RHOP200602UniProtKB/TrEMBL Q2J2J6tRNA pseudouridine synthase B
BRhodopseudomonas palustris (strain TIE-1)RHOPT00436UniProtKB/TrEMBL B3QAB2tRNA pseudouridine synthase B pmp logo
BBrucella abortus (strain 2308)BRUA202155UniProtKB/Swiss-Prot TRUB_BRUA2Pseudouridylate synthase TruB, N-terminal:tRNA pseudouridine synthase B
BBrucella abortus (strain S19)BRUA101938UniProtKB/TrEMBL A0A0F6AT80Pseudouridylate synthase TruB pmp logo
BBrucella abortus biovar 1 (strain 9-941)BRUAB02004UniProtKB/Swiss-Prot TRUB_BRUABtRNA pseudouridine synthase B similar to BR2167, tRNA pseudouridine synthase B
BBrucella canis (strain ATCC 23365 / NCTC 10854)BRUC202071UniProtKB/Swiss-Prot TRUB_BRUC2tRNA pseudouridine synthase B
BBrucella melitensis (strain M5-90)BRUM502141ncbi logo ADZ88098.1tRNA pseudouridine synthase B
BBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)BRUME01950UniProtKB/Swiss-Prot TRUB_BRUMEtRNA pseudouridine synthase B
BBrucella melitensis biotype 2 (strain ATCC 23457)BRUMB02031UniProtKB/TrEMBL C0RG49tRNA pseudouridine synthase B pmp logo
BBrucella microti (strain CCM 4915)BRUMC02085UniProtKB/TrEMBL C7LF39tRNA pseudouridine synthase B pmp logo
BBrucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO201860UniProtKB/Swiss-Prot TRUB_BRUO2tRNA pseudouridine synthase B
BBrucella suis biovar 1 (strain 1330)BRUSU02101UniProtKB/Swiss-Prot TRUB_BRUSUtRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BBrucella suis (strain ATCC 23445 / NCTC 10510)BRUSI01886UniProtKB/Swiss-Prot TRUB_BRUSItRNA pseudouridine synthase B GO_function: pseudouridylate synthase activity [GO ID 0004730]; GO_process: tRNA modification [GO ID 0006400]
BOchrobactrum anthropi (strain ATCC 49188 / DSM 6882 / JCM 21032 / NBRC 15819 / NCTC 12168)OCHA400732UniProtKB/Swiss-Prot TRUB_OCHA4tRNA pseudouridine synthase B
BHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)HYPDA03399UniProtKB/TrEMBL D8JY86tRNA pseudouridine synthase B pmp logo
BHyphomicrobium sp. (strain MC1)HYPSM04719UniProtKB/TrEMBL F8JFK9tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Evidence 2b : Function of strongly homologous gene; PubMedId : 12427942, 96079944; Product type e : enzyme pmp logo
BPelagibacterium halotolerans (strain DSM 22347 / JCM 15775 / CGMCC 1.7692 / B2)PELHB03377UniProtKB/TrEMBL G4R997tRNA pseudouridine synthase B pmp logo
BRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)RHOVT00069UniProtKB/TrEMBL E3I507tRNA pseudouridine synthase B KEGG: oca:OCAR_4505 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BMethylobacterium extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)METEA02668UniProtKB/TrEMBL C5AUN1tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Evidence 2b : Function of strongly homologous gene; PubMedId : 12427942, 96079944; Product type e : enzyme
BMethylobacterium extorquens (strain CM4 / NCIMB 13688)METC402776UniProtKB/TrEMBL B7KQJ6tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mex:Mext_2695 tRNA pseudouridine synthase B
BMethylobacterium extorquens (strain DSM 6343 / CIP 106787 / DM4)METED03280UniProtKB/TrEMBL C7C8F9tRNA pseudouridine synthase B
BMethylobacterium extorquens (strain PA1)METEP02650UniProtKB/TrEMBL A9W680tRNA pseudouridine synthase B pmp logo
BMethylobacterium nodulans (strain LMG 21967 / CNCM I-2342 / ORS 2060)METNO04329UniProtKB/TrEMBL B8IEB5tRNA pseudouridine synthase B pmp logo
BMethylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB02763UniProtKB/TrEMBL B1ZDQ6tRNA pseudouridine synthase B pmp logo
BMethylocystis sp. (strain SC2)METSZ02499UniProtKB/TrEMBL J7QHV7tRNA pseudouridine synthase B pmp logo
BChelativorans sp. (strain BNC1)CHESB03892UniProtKB/Swiss-Prot TRUB_CHESBtRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB-like; KEGG: mlo:mlr5558 tRNA pseudouridine 55 synthase
BMesorhizobium australicum (strain HAMBI 3006 / LMG 24608 / WSM2073)MESAW00018UniProtKB/TrEMBL L0KDS1tRNA pseudouridine 55 synthase TIGRFAM: tRNA pseudouridine 55 synthase
BMesorhizobium ciceri biovar biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271)MESCW00018UniProtKB/TrEMBL E8TLU5
BRhizobium loti (strain MAFF303099)RHILO04301UniProtKB/Swiss-Prot TRUB_RHILOtRNA pseudouridine 55 synthase
BAgrobacterium sp. (strain H13-3)AGRSH00075UniProtKB/TrEMBL F0L3J7tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; Pseudouridine synthase
BAgrobacterium fabrum (strain C58 / ATCC 33970)AGRFC00075UniProtKB/Swiss-Prot TRUB_AGRFCtRNA pseudouridine synthase B
BAgrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK00126UniProtKB/TrEMBL B9JGT2tRNA pseudouridine synthase B pmp logo
BAgrobacterium vitis (strain S4 / ATCC BAA-846)AGRVS00136UniProtKB/TrEMBL B9JYK8tRNA pseudouridine synthase B pmp logo
BRhizobium etli (strain CFN 42 / ATCC 51251)RHIEC00107UniProtKB/Swiss-Prot TRUB_RHIECtRNA pseudouridine synthase B protein similar to truB (SMc00321) [Sinorhizobium meliloti] and AGR_C_127p [Agrobacterium tumefaciens]; Similar to swissprot:Q92SW2; Putative location:bacterial cytoplasm Psort-Score: 0.0258; GO_function: GO:0016829 - lyase activity; GO_function: GO:0004730 - pseudouridylate synthase activity; GO_process: GO:0006396 - RNA processing; GO_process: GO:0006400 - tRNA modification; GO_process: GO:0008033 - tRNA processing
BRhizobium etli (strain CIAT 652)RHIE600144UniProtKB/TrEMBL B3PXE1tRNA pseudouridine synthase B protein
BRhizobium leguminosarum bv. trifolii (strain WSM1325)RHILS04303UniProtKB/TrEMBL C6B220tRNA pseudouridine synthase B
BRhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW04015UniProtKB/TrEMBL B5ZW27tRNA pseudouridine synthase B pmp logo
BRhizobium leguminosarum bv. viciae (strain 3841)RHIL300123UniProtKB/Swiss-Prot TRUB_RHIL3putative tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase) similarity:fasta; with=UniProt:TRUB_ECOLI (EMBL:S79856); Escherichia coli.; truB; tRNA pseudouridine synthase B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase) (Psi55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase) (Protein p35).; length=314; id 37.460; 315 aa overlap; query 1-308; subject 1-308 similarity:fasta; with=UniProt:TRUB_AGRT5 (EMBL:HS368258); Agrobacterium tumefaciens (strain C58/ATCC 33970).; truB; tRNA pseudouridine synthase B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase) (Psi55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase).; length=315; id 82.803; 314 aa overlap; query 1-309; subject 1-314
BRhizobium fredii (strain HH103)RHIFH03701UniProtKB/TrEMBL G9A5H4tRNA pseudouridine synthase B
BSinorhizobium fredii (strain NBRC 101917 / NGR234)SINFN03454UniProtKB/TrEMBL C3MC68tRNA pseudouridine synthase B
BRhizobium meliloti (strain 1021)RHIME00237UniProtKB/Swiss-Prot TRUB_RHIMEProbable tRNA pseudouridine synthase B
BSinorhizobium meliloti (strain AK83)SINMK03476ncbi logo AEG55273.1tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: smd:Smed_3443 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II
BSinorhizobium meliloti (strain BL225C)SINMB03266UniProtKB/TrEMBL A0A0E0UIX0tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: smd:Smed_3443 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II pmp logo
BSinorhizobium meliloti (strain SM11)SINMM03596UniProtKB/TrEMBL F7X4G7tRNA pseudouridine synthase B Pseudouridine synthase pmp logo
BSinorhizobium medicae (strain WSM419)SINMW03377UniProtKB/Swiss-Prot TRUB_SINMWtRNA pseudouridine synthase B
BParvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL103548UniProtKB/TrEMBL A7HZ95tRNA pseudouridine synthase B pmp logo
BStarkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)STAND03825UniProtKB/TrEMBL D6ZZH5tRNA pseudouridine synthase B KEGG: xau:Xaut_0291 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B pmp logo
BHirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418)HIRBI03032UniProtKB/TrEMBL C6XRX4tRNA pseudouridine synthase B pmp logo
BHyphomonas neptunium (strain ATCC 15444)HYPNA00117UniProtKB/TrEMBL Q0C5Z2TRNA pseudouridine synthase B pmp logo
BMaricaulis maris (strain MCS10)MARMM03030UniProtKB/Swiss-Prot TRUB_MARMMTRNA pseudouridine synthase B
BDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)DINSH03008UniProtKB/Swiss-Prot TRUB_DINSHtRNA pseudouridine synthase B
BJannaschia sp. (strain CCS1)JANSC04021UniProtKB/Swiss-Prot TRUB_JANSCtRNA pseudouridine synthase B
BKetogulonicigenium vulgare (strain WSH-001)KETVW02324UniProtKB/TrEMBL F9Y6P8tRNA pseudouridine synthase B pmp logo
BKetogulonicigenium vulgare (strain Y25)KETVY02715UniProtKB/TrEMBL E3F210tRNA pseudouridine synthase B pmp logo
BParacoccus denitrificans (strain Pd 1222)PARDP02714UniProtKB/Swiss-Prot TRUB_PARDPtRNA pseudouridine synthase B KEGG: sit:TM1040_0084 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BPhaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / JCM 21319 / NBRC 16654 / NCIMB 13546 / BS107)PHAIB03159UniProtKB/TrEMBL I7ERH1tRNA pseudouridine synthase B pmp logo
BPseudovibrio sp. (strain FO-BEG1)PSEUV00511UniProtKB/TrEMBL G8PL92tRNA pseudouridine synthase B
BRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)RHOCB00277UniProtKB/TrEMBL D5ALX3tRNA pseudouridine synthase B pmp logo
BRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS402738UniProtKB/Swiss-Prot TRUB_RHOS4tRNA pseudouridine synthase B IMG reference gene:2512956152; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BRhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS502802UniProtKB/Swiss-Prot TRUB_RHOS5TRNA pseudouridine synthase B
BRhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS102733UniProtKB/Swiss-Prot TRUB_RHOS1tRNA pseudouridine synthase B KEGG: rsp:RSP_1108 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BRhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK02483UniProtKB/TrEMBL B9KP43tRNA pseudouridine synthase B
BRoseobacter denitrificans (strain ATCC 33942 / OCh 114)ROSDO00604UniProtKB/Swiss-Prot TRUB_ROSDOtRNA pseudouridine synthase B
BRoseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)ROSLO03725UniProtKB/TrEMBL F7ZDL1putative tRNA pseudouridine synthase B pmp logo
BRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)RUEPO03769UniProtKB/Swiss-Prot TRUB_RUEPOtRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BRuegeria sp. (strain TM1040)RUEST00084UniProtKB/Swiss-Prot TRUB_RUESTtRNA pseudouridine synthase B
BAcetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153)ACEP302285UniProtKB/TrEMBL C7JFX3tRNA pseudouridine synthase B TruB pmp logo
BAcidiphilium cryptum (strain JF-5)ACICJ00434UniProtKB/TrEMBL A5FVN4TRNA pseudouridine synthase B pmp logo
BAcidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 / AIU301)ACIMA00525UniProtKB/TrEMBL F0J3M7tRNA pseudouridine synthase B protein synonym:tRNA pseudouridine 55 synthase protein synonym:tRNA-uridine isomerase pmp logo
BGluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA01322UniProtKB/Swiss-Prot TRUB_GLUDAPutative tRNA pseudouridine synthase B
BGluconobacter oxydans (strain 621H)GLUOX01502UniProtKB/Swiss-Prot TRUB_GLUOXtRNA pseudouridine synthase B
BGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)GRABC02351UniProtKB/TrEMBL Q0BPK1TRNA pseudouridine synthase B pmp logo
BKomagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG 1693 / Kondo 51)KOMMN01879UniProtKB/TrEMBL G2I099tRNA pseudouridine synthase B
BAzospirillum lipoferum (strain 4B)AZOL402783UniProtKB/TrEMBL G7Z4A9tRNA pseudouridine synthase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12427942; Product type e : enzyme
BMagnetospirillum magneticum (strain AMB-1 / ATCC 700264)MAGSA04067UniProtKB/TrEMBL Q2VZQ6Pseudouridine synthase pmp logo
BRhodospirillum centenum (strain ATCC 51521 / SW)RHOCS02831UniProtKB/TrEMBL B6IVG0tRNA pseudouridine synthase B pmp logo
BRhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1)RHORT03772UniProtKB/Swiss-Prot TRUB_RHORTtRNA pseudouridine synthase B
BTistrella mobilis (strain KA081020-065)TISMK03539UniProtKB/TrEMBL I3TRJ4Pseudouridine synthase pmp logo
BAnaplasma marginale (strain Florida)ANAMF00350UniProtKB/TrEMBL B9KIE1tRNA pseudouridine 55 synthase (truB) psort: bacterial cytoplasm --- Certainty= 0.231(Affirmative); COG0130 TruB pseudouridine synthase pmp logo
BAnaplasma marginale (strain St. Maries)ANAMM00355UniProtKB/Swiss-Prot TRUB_ANAMMtRNA pseudouridine 55 synthase COG0130 TruB pseudouridine synthase; GO_process: - 0006396
BAnaplasma phagocytophilum (strain HZ)ANAPZ00718UniProtKB/Swiss-Prot TRUB_ANAPZtRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BEhrlichia canis (strain Jake)EHRCJ00327UniProtKB/Swiss-Prot TRUB_EHRCJtRNA pseudouridine synthase B
BEhrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)EHRCR00690UniProtKB/Swiss-Prot TRUB_EHRCRtRNA pseudouridine synthase B identified by similarity to SP:P09171; match to protein family HMM PF01509; match to protein family HMM TIGR00431
BEhrlichia ruminantium (strain Gardel)EHRRG00354UniProtKB/Swiss-Prot TRUB_EHRRGtRNA pseudouridine synthase B Similar to sp|P58063|TRUB_CAUCR sp|P72154|TRUB_PSEAE sp|O51743|TRUB_BORBU sp|O66922|TRUB_AQUAE rc||truB; Ortholog to ERWE_CDS_03590
BEhrlichia ruminantium (strain Welgevonden)EHRRW00446UniProtKB/Swiss-Prot TRUB_EHRRWtRNA pseudouridine synthase B Similar to sp|P58063|TRUB_CAUCR sp|P72154|TRUB_PSEAE sp|O51743|TRUB_BORBU sp|O66922|TRUB_AQUAE rc||truB; Ortholog to ERGA_CDS_03550
BNeorickettsia risticii (strain Illinois)NEORI00096UniProtKB/TrEMBL C6V3X8tRNA pseudouridine synthase B pmp logo
BNeorickettsia sennetsu (strain ATCC VR-367 / Miyayama)NEOSM00098UniProtKB/TrEMBL Q2GEU5tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BMidichloria mitochondrii (strain IricVA)MIDMI00422UniProtKB/TrEMBL F7XVR1tRNA pseudouridine synthase B
BOrientia tsutsugamushi (strain Boryong)ORITB00124UniProtKB/TrEMBL A5CC64TRNA pseudouridine synthase B
BOrientia tsutsugamushi (strain Ikeda)ORITI01080UniProtKB/TrEMBL B3CTX3tRNA pseudouridine 55 synthase pmp logo
BRickettsia africae (strain ESF-5)RICAE00526UniProtKB/Swiss-Prot TRUB_RICAEtRNA pseudouridine synthase B
BRickettsia akari (strain Hartford)RICAH00654UniProtKB/Swiss-Prot TRUB_RICAHtRNA pseudouridine synthase B
BRickettsia amblyommatis (strain GAT-30V)RICAG00688UniProtKB/TrEMBL H8K5G0tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BRickettsia australis (strain Cutlack)RICAC00742UniProtKB/TrEMBL H8K7G5tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BRickettsia bellii (strain OSU 85-389)RICB800895UniProtKB/Swiss-Prot TRUB_RICB8tRNA pseudouridine synthase B
BRickettsia bellii (strain RML369-C)RICBR00756UniProtKB/Swiss-Prot TRUB_RICBRtRNA pseudouridine synthase B
BRickettsia canadensis (strain McKiel)RICCK00568UniProtKB/Swiss-Prot TRUB_RICCKtRNA pseudouridine synthase B
BRickettsia japonica (strain ATCC VR-1363 / YH)RICJY00493UniProtKB/TrEMBL G4KN63tRNA pseudouridine synthase B
BRickettsia massiliae (strain Mtu5)RICM500478UniProtKB/TrEMBL A8F1P5tRNA pseudouridine synthase B pmp logo
BRickettsia montanensis (strain OSU 85-930)RICMS00078UniProtKB/TrEMBL H8KAB5tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BRickettsia parkeri (strain Portsmouth)RICPT00657ncbi logo AFC74852.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BRickettsia peacockii (strain Rustic)RICPU00038UniProtKB/Swiss-Prot TRUB_RICPUtRNA pseudouridine synthase B
BRickettsia philipii (strain 364D)RICP300673UniProtKB/TrEMBL H6PTV1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BRickettsia prowazekii (strain Rp22)RICPP00517UniProtKB/TrEMBL D5AX91tRNA pseudouridine synthase B pmp logo
BRickettsia rhipicephali (strain 3-7-female6-CWPP)RICR300702ncbi logo AFC72419.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BRickettsia rickettsii (strain Iowa)RICRO00706UniProtKB/Swiss-Prot TRUB_RICROtRNA pseudouridine synthase B
BRickettsia rickettsii (strain Sheila Smith)RICRS00677UniProtKB/Swiss-Prot TRUB_RICRStRNA pseudouridine synthase B
BRickettsia slovaca (strain 13-B)RICS100566ncbi logo AEV92263.1tRNA pseudouridine synthase B
BRickettsia typhi (strain ATCC VR-144 / Wilmington)RICTY00469UniProtKB/Swiss-Prot TRUB_RICTYtRNA pseudouridine synthase B
BNovosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199)NOVAD02459UniProtKB/Swiss-Prot TRUB_NOVADtRNA pseudouridine synthase B
BSphingobium japonicum (strain NBRC 101211 / UT26S)SPHJU01601UniProtKB/TrEMBL D4Z1H6tRNA pseudouridine synthase B pmp logo
BSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)SPHWW03760UniProtKB/TrEMBL A5VCY7tRNA pseudouridine synthase B pmp logo
BSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256)SPHAL00534UniProtKB/TrEMBL Q1GVR0tRNA pseudouridine synthase B pmp logo
BZymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)ZYMMA01041UniProtKB/TrEMBL A0A0H3FZ19tRNA pseudouridine synthase B KEGG: zmn:Za10_0702 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BZymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)ZYMMO00469UniProtKB/Swiss-Prot TRUB_ZYMMOtRNA pseudouridine synthase B KEGG: swi:Swit_3808 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BZymomonas mobilis subsp. mobilis (strain NCIMB 11163 / B70)ZYMMN00695ncbi logo ACV75249.1tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: pzu:PHZ_c3434 tRNA pseudouridine synthase B
BMicavibrio aeruginosavorus (strain ARL-13)MICAA01090UniProtKB/TrEMBL G2KNA5tRNA pseudouridine synthase B pmp logo
BPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)POLGS04250UniProtKB/TrEMBL F2IVK0TRNA pseudouridine synthase B pmp logo
BPuniceispirillum marinum (strain IMCC1322)PUNMI01578UniProtKB/TrEMBL D5BU74 pmp logo
BAchromobacter xylosoxidans (strain A8)ACHXA01762UniProtKB/TrEMBL E3HWT7tRNA pseudouridine synthase B
BAdvenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001)ADVKW02463UniProtKB/TrEMBL I3UDW3tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BBordetella avium (strain 197N)BORA102377UniProtKB/Swiss-Prot TRUB_BORA1tRNA pseudouridine synthase B
BBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)BORBR03201UniProtKB/Swiss-Prot TRUB_BORBRtRNA pseudouridine synthase B
BBordetella bronchiseptica (strain MO149)BORBM01896ncbi logo CCJ58663.1tRNA pseudouridine synthase B
BBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)BORPA01848UniProtKB/Swiss-Prot TRUB_BORPAtRNA pseudouridine synthase B
BBordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 / 18323)BORP101135UniProtKB/TrEMBL A0A0T7CMC1tRNA pseudouridine synthase B pmp logo
BBordetella pertussis (strain CS)BORPC01041ncbi logo AEE66640.1tRNA pseudouridine synthase B
BBordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)BORPE01142UniProtKB/Swiss-Prot TRUB_BORPEtRNA pseudouridine synthase B
BBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD03065UniProtKB/TrEMBL A9ITW9tRNA pseudouridine synthase B pmp logo
BPusillimonas sp. (strain T7-7)PUSST00451UniProtKB/TrEMBL F4GXC6tRNA pseudouridine synthase B pmp logo
BTaylorella equigenitalis (strain MCE9)TAYEM00035UniProtKB/TrEMBL E8UD10tRNA pseudouridine synthase B tRNA Psi55 pmp logo
BBurkholderia ambifaria (strain ATCC BAA-244 / AMMD)BURCM01377UniProtKB/TrEMBL Q0BFY1tRNA pseudouridine synthase B KEGG: bur:Bcep18194_A4643 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BBurkholderia ambifaria (strain MC40-6)BURA401405UniProtKB/TrEMBL B1YP38tRNA pseudouridine synthase B pmp logo
BBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)BURCJ01409UniProtKB/TrEMBL B4E7L3tRNA pseudouridine synthase B
BBurkholderia cenocepacia (strain AU 1054)BURCA01011UniProtKB/TrEMBL A0A0H2XN40tRNA pseudouridine synthase B
BBurkholderia cenocepacia (strain HI2424)BURCH01492ncbi logo ABK08254.1tRNA pseudouridine synthase B KEGG: bcn:Bcen_1022 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BBurkholderia cenocepacia (strain MC0-3)BURCC01467UniProtKB/TrEMBL B1K0M2tRNA pseudouridine synthase B pmp logo
BBurkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194 / 383)BURL301454UniProtKB/Swiss-Prot TRUB_BURL3tRNA pseudouridine synthase B
BBurkholderia multivorans (strain ATCC 17616 / 249)BURM101730UniProtKB/TrEMBL A0A0H3KN45tRNA pseudouridine synthase B
BBurkholderia vietnamiensis (strain G4 / LMG 22486)BURVG01425UniProtKB/TrEMBL A4JDX3TRNA pseudouridine synthase B pmp logo
BBurkholderia gladioli (strain BSR3)BURGS01719UniProtKB/TrEMBL F2LB90tRNA pseudouridine synthase B
BBurkholderia glumae (strain BGR1)BURGB01883UniProtKB/TrEMBL C5AH02TRNA pseudouridine synthase B pmp logo
BBurkholderia mallei (strain ATCC 23344)BURMA00847UniProtKB/Swiss-Prot TRUB_BURMAtRNA pseudouridine synthase B
BBurkholderia mallei (strain NCTC 10229)BURM900164UniProtKB/TrEMBL A2S2K9TRNA pseudouridine synthase B pmp logo
BBurkholderia mallei (strain NCTC 10247)BURM700926UniProtKB/Swiss-Prot TRUB_BURM7TRNA pseudouridine synthase B
BBurkholderia mallei (strain SAVP1)BURMS01417ncbi logo ABM50238.1TRNA pseudouridine synthase B
BBurkholderia pseudomallei (strain 1106a)BURP001737UniProtKB/Swiss-Prot TRUB_BURP0TRNA pseudouridine synthase B
BBurkholderia pseudomallei (strain 1710b)BURP101881UniProtKB/Swiss-Prot TRUB_BURP1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BBurkholderia pseudomallei (strain 668)BURP601724UniProtKB/Swiss-Prot TRUB_BURP6TRNA pseudouridine synthase B
BBurkholderia pseudomallei (strain K96243)BURPS01923UniProtKB/Swiss-Prot TRUB_BURPStRNA pseudouridine synthase B
BBurkholderia sp. (strain CCGE1002)BURSC01157UniProtKB/TrEMBL D5W6Y1tRNA pseudouridine synthase B KEGG: bxe:Bxe_A2818 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B
BBurkholderia sp. (strain CCGE1003)BURSG01949UniProtKB/TrEMBL E1TAL6tRNA pseudouridine synthase B
BBurkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)BURTA02482UniProtKB/TrEMBL Q2SVH0tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BCupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)CUPMC01991UniProtKB/Swiss-Prot TRUB_CUPMCtRNA pseudouridine synthase B
BCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)CUPNH02244UniProtKB/TrEMBL Q0K9C1tRNA pseudouridine synthase B pmp logo
BCupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1)CUPNN02162UniProtKB/TrEMBL G0EZW2tRNA pseudouridine synthase B
BCupriavidus necator (strain JMP 134 / LMG 1197)CUPNJ02001UniProtKB/Swiss-Prot TRUB_CUPNJtRNA pseudouridine synthase B
BCupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1)CUPTR01797UniProtKB/Swiss-Prot TRUB_CUPTRtRNA pseudouridine synthase B
BParaburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)PARP801711UniProtKB/TrEMBL B2JKT2tRNA pseudouridine synthase B pmp logo
BParaburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)PARPJ01571UniProtKB/TrEMBL B2T383tRNA pseudouridine synthase B
BParaburkholderia xenovorans (strain LB400)PARXL01579UniProtKB/TrEMBL Q140U4tRNA pseudouridine synthase B pmp logo
BPolynucleobacter asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1)POLAQ01215UniProtKB/TrEMBL A4SY76tRNA pseudouridine synthase B pmp logo
BPolynucleobacter necessarius subsp. necessarius (strain STIR1)POLNS00932UniProtKB/TrEMBL B1XV87tRNA pseudouridine synthase B pmp logo
BRalstonia pickettii (strain 12D)RALP101182UniProtKB/TrEMBL C6BGX4tRNA pseudouridine synthase B
BRalstonia pickettii (strain 12J)RALPJ01093UniProtKB/Swiss-Prot TRUB_RALPJtRNA pseudouridine synthase B
BRalstonia solanacearum (strain GMI1000)RALSO01279UniProtKB/Swiss-Prot TRUB_RALSOtRNA pseudouridine synthase B
BRalstonia solanacearum (strain Po82)RALS802033UniProtKB/TrEMBL F6G301trna pseudouridine synthase b protein
BAcidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)ACIAP01835UniProtKB/TrEMBL F0Q798
BAcidovorax citrulli (strain AAC00-1)ACIAC03223UniProtKB/TrEMBL A1TSK1tRNA pseudouridine synthase B KEGG: rfr:Rfer_2136 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BAcidovorax ebreus (strain TPSY)ACIET01219UniProtKB/TrEMBL B9MGP3tRNA pseudouridine synthase B
BAcidovorax sp. (strain JS42)ACISJ02373UniProtKB/TrEMBL A1W8Z2tRNA pseudouridine synthase B KEGG: rfr:Rfer_2136 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BComamonas testosteroni (strain CNB-2)COMT201794UniProtKB/TrEMBL D0J653tRNA pseudouridine synthase B COG0130, TruB, Pseudouridine synthase
BDelftia acidovorans (strain DSM 14801 / SPH-1)DELAS02925UniProtKB/TrEMBL A9C1Z4tRNA pseudouridine synthase B pmp logo
BDelftia sp. (strain Cs1-4)DELSC03692UniProtKB/TrEMBL F6B222tRNA pseudouridine synthase B KEGG: dac:Daci_2992 tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; PFAM: Pseudouridine synthase II, TruB, N-terminal pmp logo
BPolaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ02373UniProtKB/TrEMBL Q12AU5tRNA pseudouridine synthase B pmp logo
BRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)RAMTT01993UniProtKB/TrEMBL F5XXR8Uracil hydrolyase pmp logo
BRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)RHOFT02086UniProtKB/TrEMBL Q21WJ3tRNA pseudouridine synthase B pmp logo
BVariovorax paradoxus (strain EPS)VARPE02812UniProtKB/TrEMBL E6V4V7tRNA pseudouridine synthase B KEGG: vap:Vapar_2750 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BVariovorax paradoxus (strain S110)VARPS02704UniProtKB/TrEMBL C5CLW5tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: rfr:Rfer_2136 tRNA pseudouridine synthase B pmp logo
BVerminephrobacter eiseniae (strain EF01-2)VEREI02669UniProtKB/Swiss-Prot TRUB_VEREITRNA pseudouridine synthase B
BCollimonas fungivorans (strain Ter331)COLFT03425UniProtKB/TrEMBL G0AD81tRNA pseudouridine 5S synthase pmp logo
BHerbaspirillum seropedicae (strain SmR1)HERSS03549UniProtKB/TrEMBL D8IQG8tRNA pseudouridine synthase B protein pmp logo
BHerminiimonas arsenicoxydansHERAR02311UniProtKB/TrEMBL A4G7S5TRNA pseudouridine 5S synthase pmp logo
BJanthinobacterium sp. (strain Marseille)JANMA02492UniProtKB/TrEMBL A6T0Y6tRNA pseudouridine synthase B pmp logo
BLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP01686UniProtKB/TrEMBL B1XY69tRNA pseudouridine synthase B pmp logo
BMethylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1)METPP01879UniProtKB/TrEMBL A2SH38Pseudouridylate synthase pmp logo
BRubrivivax gelatinosus (strain NBRC 100245 / IL144)RUBGI02815UniProtKB/TrEMBL I0HT24tRNA pseudouridine synthase B pmp logo
BChromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)CHRVO01462UniProtKB/Swiss-Prot TRUB_CHRVOtRNA pseudouridine synthase B
BLaribacter hongkongensis (strain HLHK9)LARHH01884UniProtKB/TrEMBL C1D8X0TruB pmp logo
BPseudogulbenkiania sp. (strain NH8B)PSEUL02737UniProtKB/TrEMBL G2IVV0tRNA pseudouridine synthase B K03177 pmp logo
BNeisseria gonorrhoeae (strain ATCC 700825 / FA 1090)NEIG100582UniProtKB/Swiss-Prot TRUB_NEIG1putative tRNA pseudouridine synthase B Best Blastp Hit: pir||G81851 pseudouridylate synthase (EC 4.2.1.70) B tRNA-specific NMA1588 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7380229|emb|CAB84815.1| (AL162756) tRNA pseudouridine synthase B [Neisseria meningitidis]; COG0130 Pseudouridine synthase
BNeisseria gonorrhoeae (strain NCCP11945)NEIG201244UniProtKB/Swiss-Prot TRUB_NEIG2Putative tRNA pseudouridine synthase B
BNeisseria meningitidis (strain alpha14)NEIML01168UniProtKB/TrEMBL C6S7L0tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup A / serotype 4A (strain Z2491)NEIMA01382UniProtKB/Swiss-Prot TRUB_NEIMATRNA pseudouridine synthase B
BNeisseria meningitidis serogroup A (strain WUE 2594)NEIMW01173ncbi logo CBY91007.1tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase; Psi55 synthase; tRNA-uridine isomerase; tRNA pseudouridylate synthase) MultiFUN-ID: 2.2.3
BNeisseria meningitidis serogroup B (strain MC58)NEIMB01261UniProtKB/Swiss-Prot TRUB_NEIMBtRNA pseudouridine synthase B
BNeisseria meningitidis serogroup B (strain alpha710)NEIM701279UniProtKB/TrEMBL E3D5W9tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup B / serotype 15 (strain H44/76)NEIMH00780ncbi logo ADY95460.1tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup B (strain G2136)NEIMG01212ncbi logo ADY93974.1tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup B (strain M01-240149)NEIMM00731ncbi logo ADY97371.1tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup B (strain M01-240355)NEIMP01245ncbi logo ADY99821.1tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup B (strain M04-240196)NEIMO00763ncbi logo ADZ01312.1tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup B (strain NZ-05/33)NEIMN01303UniProtKB/TrEMBL A0A0E0TR43tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup C (strain 053442)NEIM001211UniProtKB/TrEMBL A9M022tRNA pseudouridine synthase B Code: J; COG: COG0130 pmp logo
BNeisseria meningitidis serogroup C (strain 8013)NEIM800878ncbi logo CAX49890.1tRNA pseudouridine synthase B
BNeisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18)NEIMF01188UniProtKB/TrEMBL A1KUJ6TRNA pseudouridine synthase B pmp logo
BGallionella capsiferriformans (strain ES-2)GALCS01215UniProtKB/TrEMBL D9SFJ4tRNA pseudouridine synthase B KEGG: slt:Slit_1484 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B pmp logo
BSideroxydans lithotrophicus (strain ES-1)SIDLE01478UniProtKB/TrEMBL D5CRY5tRNA pseudouridine synthase B KEGG: bur:Bcep18194_A4643 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B pmp logo
BMethylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)METFK00069UniProtKB/Swiss-Prot TRUB_METFKtRNA pseudouridine synthase B
BMethylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540)METML00211UniProtKB/TrEMBL C6WSN1tRNA pseudouridine synthase B pmp logo
BMethylovorus glucosetrophus (strain SIP3-4)METGS00072UniProtKB/TrEMBL C6X851tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: mfa:Mfla_0069 tRNA pseudouridine synthase B pmp logo
BMethylovorus sp. (strain MP688)METS600071ncbi logo ADQ83271.1tRNA pseudouridine synthase B
BNitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)NITEU00732UniProtKB/Swiss-Prot TRUB_NITEUtRNA pseudouridine synthase B
BNitrosomonas eutropha (strain C91)NITEC01550UniProtKB/TrEMBL Q0AFJ5tRNA pseudouridine synthase B KEGG: neu:NE0763 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BNitrosomonas sp. (strain Is79A3)NITSI01891UniProtKB/TrEMBL F8GLP4tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: nit:NAL212_0877 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type pmp logo
BNitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71)NITMU01790UniProtKB/Swiss-Prot TRUB_NITMUtRNA pseudouridine synthase B
BThiobacillus denitrificans (strain ATCC 25259)THIDA00694UniProtKB/Swiss-Prot TRUB_THIDAtRNA pseudouridine synthase B
BDechloromonas aromatica (strain RCB)DECAR02410UniProtKB/Swiss-Prot TRUB_DECARtRNA pseudouridine synthase B
BAromatoleum aromaticum (strain EbN1)AROAE03230UniProtKB/Swiss-Prot TRUB_AROAEtRNA pseudouridine synthase B
BDechlorosoma suillum (strain ATCC BAA-33 / DSM 13638 / PS)DECSP02631UniProtKB/TrEMBL G8QPG6tRNA pseudouridine 55 synthase PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; manually curated pmp logo
BAzoarcus sp. (strain BH72)AZOSB02096UniProtKB/Swiss-Prot TRUB_AZOSBtRNA pseudouridine 55 synthase tRNA pseudouridine synthase B (EC 4.2.1.70) (Psi55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase). TruB: tRNA pseudouridine synthase B High confidence in function and specificity
BThauera sp. (strain MZ1T)THASP01621UniProtKB/TrEMBL C4ZJR7tRNA pseudouridine synthase B pmp logo
BAccumulibacter phosphatis (strain UW-1)ACCPU02775UniProtKB/TrEMBL C7RU79tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: dar:Daro_2450 tRNA pseudouridine synthase B pmp logo
BAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240)AERHH03209UniProtKB/TrEMBL A0KNE1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BAeromonas salmonicida (strain A449)AERS400908UniProtKB/Swiss-Prot TRUB_AERS4TRNA pseudouridine 55 synthase
BAeromonas veronii (strain B565)AERVB03168ncbi logo AEB51221.1tRNA pseudouridine synthase B
BOceanimonas sp. (strain GK1)OCESG01440UniProtKB/TrEMBL H2FSV8tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BAlteromonas macleodii (strain Balearic Sea AD45)ALTMB01719UniProtKB/TrEMBL K0E9S7tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BAlteromonas macleodii (strain Black Sea 11)ALTMS01591UniProtKB/TrEMBL K0CXA9tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BAlteromonas macleodii (strain English Channel 673)ALTME01629UniProtKB/TrEMBL A0A0E0YAW7tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BAlteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype)ALTMD01732UniProtKB/TrEMBL F2GAD0tRNA pseudouridine synthase B pmp logo
BAlteromonas naphthalenivoransALTNA01300UniProtKB/TrEMBL F5Z4D5tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BMarinobacter adhaerens (strain HP15)MARAH03063UniProtKB/TrEMBL E4PNZ9tRNA pseudouridine synthase B pmp logo
BMarinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)MARHV03210UniProtKB/Swiss-Prot TRUB_MARHVtRNA pseudouridine synthase B KEGG: sbo:SBO_3216 tRNA pseudouridine 5S synthase TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BColwellia psychrerythraea (strain 34H / ATCC BAA-681)COLP302129UniProtKB/Swiss-Prot TRUB_COLP3tRNA pseudouridine synthase B identified by similarity to SP:P09171; match to protein family HMM PF01509; match to protein family HMM TIGR00431
BFerrimonas balearica (strain DSM 9799 / CCM 4581 / PAT)FERBD02859UniProtKB/TrEMBL E1SSS0tRNA pseudouridine synthase B pmp logo
BIdiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)IDILO00954UniProtKB/Swiss-Prot TRUB_IDILOtRNA pseudouridine 5S synthase
BPseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)PSEA601681UniProtKB/Swiss-Prot TRUB_PSEA6TRNA pseudouridine synthase B
BPseudoalteromonas haloplanktis (strain TAC 125)PSEHT00963UniProtKB/Swiss-Prot TRUB_PSEHTtRNA pseudouridine 5S synthase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7489483; Product type e : enzyme
BPseudoalteromonas sp. (strain SM9913)PSEU901041ncbi logo ADT68012.1
BPsychromonas ingrahamii (strain 37)PSYIN00787UniProtKB/Swiss-Prot TRUB_PSYINtRNA pseudouridine synthase B KEGG: vpa:VP2454 tRNA pseudouridine 55 synthase TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BShewanella amazonensis (strain ATCC BAA-1098 / SB2B)SHEAM00955UniProtKB/Swiss-Prot TRUB_SHEAMpseudouridylate synthase KEGG: sdn:Sden_1009 tRNA pseudouridine synthase B
BShewanella baltica (strain OS155 / ATCC BAA-1091)SHEB502946UniProtKB/Swiss-Prot TRUB_SHEB5TRNA pseudouridine synthase B
BShewanella baltica (strain OS185)SHEB803207UniProtKB/Swiss-Prot TRUB_SHEB8tRNA pseudouridine synthase B
BShewanella baltica (strain OS195)SHEB903338UniProtKB/Swiss-Prot TRUB_SHEB9TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B KEGG: shw:Sputw3181_1072 tRNA pseudouridine synthase B tRNA pseudouridine synthase B
BShewanella baltica (strain OS223)SHEB201084UniProtKB/Swiss-Prot TRUB_SHEB2tRNA pseudouridine synthase B
BShewanella baltica (strain OS678)SHEB603332ncbi logo ADT95568.1tRNA pseudouridine synthase B KEGG: shw:Sputw3181_1072 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B
BShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)SHEDO00990UniProtKB/Swiss-Prot TRUB_SHEDOTRNA pseudouridine synthase B
BShewanella frigidimarina (strain NCIMB 400)SHEFN00969UniProtKB/Swiss-Prot TRUB_SHEFNTRNA pseudouridine synthase B
BShewanella halifaxensis (strain HAW-EB4)SHEHH03114UniProtKB/Swiss-Prot TRUB_SHEHHtRNA pseudouridine synthase B
BShewanella loihica (strain ATCC BAA-1088 / PV-4)SHELP02814UniProtKB/Swiss-Prot TRUB_SHELPtRNA pseudouridine synthase B KEGG: she:Shewmr4_1028 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BShewanella pealeana (strain ATCC 700345 / ANG-SQ1)SHEPA02991UniProtKB/Swiss-Prot TRUB_SHEPATIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B KEGG: slo:Shew_2825 tRNA pseudouridine synthase B tRNA pseudouridine synthase B
BShewanella piezotolerans (strain WP3 / JCM 13877)SHEPW01157UniProtKB/Swiss-Prot TRUB_SHEPWtRNA pseudouridine synthase B
BShewanella putrefaciens (strain 200)SHEP202829UniProtKB/TrEMBL E6XJ84tRNA pseudouridine synthase B KEGG: shw:Sputw3181_1072 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B pmp logo
BShewanella putrefaciens (strain CN-32 / ATCC BAA-453)SHEPC02792UniProtKB/Swiss-Prot TRUB_SHEPCTRNA pseudouridine synthase B
BShewanella sediminis (strain HAW-EB3)SHESH03374UniProtKB/TrEMBL A8FYR8KEGG: sbl:Sbal_3237 tRNA pseudouridine synthase B tRNA pseudouridine synthase B pmp logo
BShewanella sp. (strain ANA-3)SHESA01017UniProtKB/Swiss-Prot TRUB_SHESAtRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein KEGG: vvy:VV2706 pseudouridine synthase
BShewanella sp. (strain MR-4)SHESM01023UniProtKB/Swiss-Prot TRUB_SHESMTRNA pseudouridine synthase B
BShewanella sp. (strain MR-7)SHESR01083UniProtKB/Swiss-Prot TRUB_SHESRTRNA pseudouridine synthase B
BShewanella sp. (strain W3-18-1)SHESW01052UniProtKB/Swiss-Prot TRUB_SHESWtRNA pseudouridine synthase B KEGG: she:Shewmr4_1028 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)SHEVD03278UniProtKB/TrEMBL D4ZB63tRNA pseudouridine synthase B
BShewanella woodyi (strain ATCC 51908 / MS32)SHEWM03508UniProtKB/Swiss-Prot TRUB_SHEWMtRNA pseudouridine synthase B
BDichelobacter nodosus (strain VCS1703A)DICNV00025UniProtKB/TrEMBL A5EWY7TRNA pseudouridine synthase B pmp logo
BCellvibrio japonicus (strain Ueda107)CELJU00426UniProtKB/TrEMBL B3PI98tRNA pseudouridine synthase B pmp logo
BSaccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD202694UniProtKB/Swiss-Prot TRUB_SACD2tRNA pseudouridine synthase B
BSimiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)SIMAS01445UniProtKB/TrEMBL K4KXN3tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BTeredinibacter turnerae (strain ATCC 39867 / T7901)TERTT02869UniProtKB/TrEMBL C5BPV7tRNA pseudouridine synthase B pmp logo
BAllochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D)ALLVD00489UniProtKB/TrEMBL D3RNV1tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: tgr:Tgr7_1005 tRNA pseudouridine synthase B pmp logo
BNitrosococcus halophilus (strain Nc4)NITHN02572UniProtKB/TrEMBL D5BXS9tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: noc:Noc_2118 tRNA pseudouridine synthase B pmp logo
BNitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107)NITOC02001UniProtKB/Swiss-Prot TRUB_NITOCtRNA pseudouridine synthase B
BNitrosococcus watsoni (strain C-113)NITWC00910UniProtKB/TrEMBL D8K4T6tRNA pseudouridine synthase B KEGG: noc:Noc_2118 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B
BThiocystis violascens (strain ATCC 17096 / DSM 198 / 6111)THIV602847UniProtKB/TrEMBL I3YDH9tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BAlkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)ALKEH01926UniProtKB/TrEMBL Q0A799tRNA pseudouridine synthase B KEGG: noc:Noc_2118 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BHalorhodospira halophila (strain DSM 244 / SL1)HALHL01714UniProtKB/Swiss-Prot TRUB_HALHLTRNA pseudouridine synthase B
BThioalkalivibrio sp. (strain K90mix)THISK00717UniProtKB/TrEMBL D3SFL2tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: aeh:Mlg_1946 tRNA pseudouridine synthase B pmp logo
BThioalkalivibrio sulfidiphilus (strain HL-EbGR7)THISH00983UniProtKB/TrEMBL B8GP04tRNA pseudouridine synthase B pmp logo
BHalothiobacillus neapolitanus (strain ATCC 23641 / c2)HALNC01427UniProtKB/TrEMBL D0L0S4tRNA pseudouridine synthase B pmp logo
BMoranella endobia (strain PCIT)MOREP00267UniProtKB/TrEMBL F7XXW6tRNA pseudouridine synthase B predicted based on similarity to TIGRFAM TruB and related proteins in nr pmp logo
BCitrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)CITK804425UniProtKB/Swiss-Prot TRUB_CITK8Putative uncharacterized protein
BCitrobacter rodentium (strain ICC168)CITRI04448UniProtKB/TrEMBL D2TQ08tRNA pseudouridine synthase B
BCronobacter sakazakii (strain ATCC BAA-894)CROS803444UniProtKB/Swiss-Prot TRUB_CROS8Putative uncharacterized protein
BCronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)CROTZ00413UniProtKB/TrEMBL C9XU29tRNA pseudouridine synthase B
BEnterobacter asburiae (strain LF7a)ENTAL03781UniProtKB/TrEMBL G2SCN7tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: enc:ECL_04548 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type
BEnterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56)ENTCC04411UniProtKB/TrEMBL A0A0H3CSA3tRNA pseudouridine synthase B
BEnterobacter lignolyticus (strain SCF1)ENTLS00528UniProtKB/TrEMBL E3G0Y4tRNA pseudouridine synthase B KEGG: enc:ECL_04548 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B
BEnterobacter sp. (strain 638)ENT3803569UniProtKB/Swiss-Prot TRUB_ENT38tRNA pseudouridine synthase B
BEscherichia coliECOLX00066UniProtKB/TrEMBL A0A222QQL2COG0130 Pseudouridine synthase tRNA pseudouridine synthase B pmp logo
BEscherichia coli (strain 'clone D i14')ECOC103534ncbi logo AER91063.1tRNA pseudouridine synthase B
BEscherichia coli (strain 'clone D i2')ECOC203534ncbi logo AER86144.1tRNA pseudouridine synthase B
BEscherichia coli (strain 55989 / EAEC)ECO5503453UniProtKB/TrEMBL B7LHN1tRNA pseudouridine synthase pmp logo
BEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)ECOD100524ncbi logo ACX38227.1tRNA pseudouridine synthase B
BEscherichia coli (strain ATCC 55124 / KO11FL)ECOKO00535ncbi logo ADX49206.1tRNA pseudouridine synthase B KEGG: ssn:SSON_3312 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B
BEscherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W)ECOLW03487UniProtKB/TrEMBL E0J2S6tRNA pseudouridine synthase pmp logo
BEscherichia coli (strain B / BL21)ECOBB02915ncbi logo CAQ33501.1TruB protein
BEscherichia coli (strain B / BL21-DE3)ECOBD00555UniProtKB/TrEMBL A0A140N5M2tRNA pseudouridine synthase B pmp logo
BEscherichia coli (strain K12)ECOLI03049UniProtKB/Swiss-Prot TRUB_ECOLItRNA pseudouridine synthase B
BEscherichia coli (strain K12 / DH10B)ECODH02954ncbi logo ACB04245.1tRNA U55 pseudouridine synthase
BEscherichia coli (strain K12 / MC4100 / BW2952)ECOBW02825ncbi logo ACR65709.1tRNA pseudouridine synthase
BEscherichia coli (strain SE11)ECOSE03435UniProtKB/TrEMBL B6I1P1tRNA pseudouridine synthase pmp logo
BEscherichia coli (strain SMS-3-5 / SECEC)ECOSM03299UniProtKB/TrEMBL B1LFR8tRNA pseudouridine synthase B pmp logo
BEscherichia coli (strain UM146)ECOUM00106ncbi logo ADN69537.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BEscherichia coli (strain UTI89 / UPEC)ECOUT03522UniProtKB/Swiss-Prot TRUB_ECOUTtRNA pseudouridine synthase B
BEscherichia coli (strain B / REL606)ECOBR02931ncbi logo ACT40682.1tRNA pseudouridine synthase B
BEscherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)ECOLC00515UniProtKB/Swiss-Prot TRUB_ECOLCtRNA pseudouridine synthase B
BEscherichia coli O103:H2 (strain 12009 / EHEC)ECO1003758UniProtKB/TrEMBL C8TXG3tRNA pseudouridine synthase pmp logo
BEscherichia coli O104:H4 (strain 2009EL-2071)ECO1E00592ncbi logo AFS88224.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BEscherichia coli O111:H- (strain 11128 / EHEC)ECO1A03838UniProtKB/TrEMBL C8UGC5tRNA pseudouridine synthase B pmp logo
BEscherichia coli O127:H6 (strain E2348/69 / EPEC)ECO2703386UniProtKB/TrEMBL B7UJ61tRNA pseudouridine synthase pmp logo
BEscherichia coli O139:H28 (strain E24377A / ETEC)ECO2403427UniProtKB/Swiss-Prot TRUB_ECO24tRNA pseudouridine synthase B
BEscherichia coli O150:H5 (strain SE15)ECOS502986ncbi logo BAI56540.1tRNA pseudouridine synthase
BEscherichia coli O157:H7ECO5703884UniProtKB/Swiss-Prot TRUB_ECO57tRNA pseudouridine synthase B
BEscherichia coli O157:H7 (strain EC4115 / EHEC)ECO5E03827ncbi logo ACI38300.1tRNA pseudouridine synthase B
BEscherichia coli O157:H7 (strain TW14359 / EHEC)ECO5T03854ncbi logo ACT73878.1tRNA U55 pseudouridine synthase
BEscherichia coli O17:K52:H18 (strain UMN026 / ExPEC)ECOLU03543UniProtKB/TrEMBL B7NDF2tRNA pseudouridine synthase pmp logo
BEscherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)ECOKI03434ncbi logo ADE89256.1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM PF09157; match to protein family HMM TIGR00431
BEscherichia coli O1:K1 / APECECOK103155UniProtKB/Swiss-Prot TRUB_ECOK1tRNA pseudouridine 5S synthase
BEscherichia coli O26:H11 (strain 11368 / EHEC)ECO2604079ncbi logo BAI27446.1tRNA pseudouridine synthase
BEscherichia coli O44:H18 (strain 042 / EAEC)ECO4403421UniProtKB/TrEMBL D3GXQ7tRNA pseudouridine synthase B
BEscherichia coli O45:K1 (strain S88 / ExPEC)ECO4503372UniProtKB/TrEMBL B7MB87tRNA pseudouridine synthase pmp logo
BEscherichia coli O55:H7 (strain CB9615 / EPEC)ECOCB03679UniProtKB/TrEMBL D3QSN8tRNA pseudouridine synthase B pmp logo
BEscherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)ECOL603790UniProtKB/Swiss-Prot TRUB_ECOL6tRNA pseudouridine synthase B
BEscherichia coli O6:K15:H31 (strain 536 / UPEC)ECOL503203UniProtKB/Swiss-Prot TRUB_ECOL5tRNA pseudouridine synthase B
BEscherichia coli O78:H11 (strain H10407 / ETEC)ECOH103358UniProtKB/TrEMBL E3PK78tRNA pseudouridine synthase B pmp logo
BEscherichia coli O7:K1 (strain IAI39 / ExPEC)ECO7I03467UniProtKB/TrEMBL A0A0H3MLB3tRNA pseudouridine synthase pmp logo
BEscherichia coli O8 (strain IAI1)ECO8A03198ncbi logo CAR00130.1tRNA pseudouridine synthase
BEscherichia coli O81 (strain ED1a)ECO8103623UniProtKB/TrEMBL B7N0G1tRNA pseudouridine synthase
BEscherichia coli O83:H1 (strain NRG 857C / AIEC)ECO8N03113UniProtKB/TrEMBL A0A0H3EP46tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BEscherichia coli O9:H4 (strain HS)ECOHS03116UniProtKB/Swiss-Prot TRUB_ECOHStRNA pseudouridine synthase B
BEscherichia coli OR:K5:H- (strain ABU 83972)ECOAB03406ncbi logo ADN48037.1tRNA pseudouridine synthase B
BEscherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)ESCF303034UniProtKB/TrEMBL B7LR35tRNA pseudouridine synthase Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 12427942, 96079944; Product type e : enzyme
BKlebsiella aerogenes (strain ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006)KLEAK00843UniProtKB/TrEMBL A0A0H3FKD0tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BKlebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686)KLEOK00722UniProtKB/TrEMBL A0A0H3H203tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BKlebsiella pneumoniae (strain 342)KLEP300536UniProtKB/TrEMBL B5XSX6tRNA pseudouridine synthase B
BKlebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)KLEP703529UniProtKB/Swiss-Prot TRUB_KLEP7tRNA pseudouridine synthase B
BKlebsiella pneumoniae subsp. pneumoniae (strain HS11286)KLEPH04680UniProtKB/TrEMBL A0A0H3GTP1tRNA pseudouridine synthase B
BKlebsiella variicola (strain At-22)KLEVT00517ncbi logo ADC56453.1tRNA pseudouridine synthase B
BSalmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)SALBC02863UniProtKB/TrEMBL A0A0K0HEG8tRNA pseudouridine 55 synthase (psi55 synthase) (p35 protein)
BSalmonella dublin (strain CT_02021853)SALDC03294ncbi logo ACH75485.1tRNA pseudouridine synthase B
BSalmonella agona (strain SL483)SALA403214UniProtKB/TrEMBL B5F6T6tRNA pseudouridine synthase B
BSalmonella choleraesuis (strain SC-B67)SALCH03186UniProtKB/Swiss-Prot TRUB_SALCHtRNA pseudouridine 5S synthase IPR002501: Pseudouridylate synthase TruB, N-terminal; IPR004510: tRNA pseudouridine synthase B
BSalmonella pullorum (strain RKS5078 / SGSC2294)SALPS03087ncbi logo AET55555.1tRNA pseudouridine 55 synthase (psi55 synthase) (p35 protein)
BSalmonella heidelberg (strain SL476)SALHS03325ncbi logo ACF67538.1tRNA pseudouridine synthase B
BSalmonella paratyphi B (strain ATCC BAA-1250 / SPB7)SALPB03944UniProtKB/Swiss-Prot TRUB_SALPBPutative uncharacterized protein
BSalmonella paratyphi C (strain RKS4594)SALPC03209UniProtKB/TrEMBL C0PZ52tRNA pseudouridine synthase B pmp logo
BSalmonella schwarzengrund (strain CVM19633)SALSV03210UniProtKB/TrEMBL A0A0N1TVE3tRNA pseudouridine synthase B
BSalmonella enteritidis PT4 (strain P125109)SALEP03092ncbi logo CAR34695.1tRNA pseudouridine 55 synthase
BSalmonella gallinarum (strain 287/91 / NCTC 13346)SALG203049UniProtKB/TrEMBL B5REN4tRNA pseudouridine 55 synthase pmp logo
BSalmonella newport (strain SL254)SALNS03303UniProtKB/TrEMBL A0A0H3BPY2tRNA pseudouridine synthase B
BSalmonella paratyphi A (strain AKU_12601)SALPK03066ncbi logo CAR61191.1tRNA pseudouridine 55 synthase
BSalmonella paratyphi A (strain ATCC 9150 / SARB42)SALPA02930UniProtKB/Swiss-Prot TRUB_SALPAtRNA pseudouridine 55 synthase (psi55 synthase) (p35 protein) similar to Salmonella typhi CT18 tRNA pseudouridine 55 synthase (psi55 synthase) (p35 protein)
BSalmonella typhiSALTI03150UniProtKB/Swiss-Prot TRUB_SALTItRNA pseudouridine synthase B
BSalmonella typhimurium (strain 4/74)SALT403313UniProtKB/TrEMBL E8XCA1tRNA pseudouridine synthase B pmp logo
BSalmonella typhimurium (strain D23580)SALTD03260ncbi logo CBG26287.1tRNA pseudouridine 55 synthase (psi55 synthase) (p35 protein) pfam_scan;Pfam:PF09157;;E()=1.0E-17;score=63.4;query 252-309;description=TruB-C_2 pfam_scan;Pfam:PF01509;;E()=2.2E-58;score=195.9;quer y 33-180;description=TruB_N
BSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)SALTY03170UniProtKB/Swiss-Prot TRUB_SALTYtRNA pseudouridine synthase B
BSalmonella typhimurium (strain 14028s / SGSC 2262)SALT103827UniProtKB/TrEMBL A0A0F6B769tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs pmp logo
BSalmonella typhimurium (strain SL1344)SALTS03239UniProtKB/TrEMBL A0A0H3NSA3tRNA pseudouridine synthase B pmp logo
BSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)SALAR04155UniProtKB/Swiss-Prot TRUB_SALARPutative uncharacterized protein
BShigella boydii serotype 18 (strain CDC 3083-94 / BS512)SHIB302769UniProtKB/TrEMBL B2U209tRNA pseudouridine synthase B
BShigella boydii serotype 4 (strain Sb227)SHIBS02698UniProtKB/Swiss-Prot TRUB_SHIBStRNA pseudouridine 5S synthase Code: J; COG: COG0130
BShigella dysenteriae serotype 1 (strain Sd197)SHIDS02640UniProtKB/Swiss-Prot TRUB_SHIDStRNA pseudouridine 5S synthase Code: J; COG: COG0130
BShigella flexneriSHIFL03545UniProtKB/Swiss-Prot TRUB_SHIFLtRNA pseudouridine 5S synthase Code: J; COG: COG0130 pmp logo
BShigella flexneri serotype 5b (strain 8401)SHIF802736UniProtKB/Swiss-Prot TRUB_SHIF8tRNA pseudouridine 5S synthase Code: J; COG: COG0130
BShigella flexneri serotype X (strain 2002017)SHIF203001UniProtKB/TrEMBL D2A889tRNA pseudouridine synthase B pmp logo
BShigella sonnei (strain Ss046)SHISS02778UniProtKB/Swiss-Prot TRUB_SHISStRNA pseudouridine 5S synthase Code: J; COG: COG0130
BShimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74)SHIBC00406UniProtKB/TrEMBL I2B4U1tRNA pseudouridine synthase pmp logo
BBlochmannia floridanusBLOFL00099UniProtKB/Swiss-Prot TRUB_BLOFLtRNA pseudouridine synthase B
BBlochmannia pennsylvanicus (strain BPEN)BLOPB00101UniProtKB/Swiss-Prot TRUB_BLOPBtRNA pseudouridine 5S synthase ortholog to Escherichia coli bnum: b3166; MultiFun: Information transfer 2.2.3
BBlochmannia vafer (strain BVAF)BLOVB00100UniProtKB/TrEMBL E8Q6S3tRNA pseudouridine synthase B pmp logo
BHamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)HAMD500304UniProtKB/Swiss-Prot TRUB_HAMD5tRNA pseudouridine synthase B
BEnterobacteriaceae bacterium (strain FGI 57)ENTBF00519UniProtKB/TrEMBL L0LZV3tRNA pseudouridine 55 synthase PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)BUCAI00349UniProtKB/Swiss-Prot TRUB_BUCAItRNA pseudouridine synthase B
BBuchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)BUCA500345ncbi logo ACL30731.1tRNA pseudouridine 55 synthase
BBuchnera aphidicola subsp. Acyrthosiphon pisum (strain JF99)BUCAF00369ncbi logo ADP67351.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BBuchnera aphidicola subsp. Acyrthosiphon pisum (strain LL01)BUCA000362ncbi logo ADP66194.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BBuchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)BUCAT00343ncbi logo ACL30177.1tRNA pseudouridine 55 synthase
BBuchnera aphidicola subsp. Baizongia pistaciae (strain Bp)BUCBP00315UniProtKB/Swiss-Prot TRUB_BUCBPtRNA pseudouridine synthase B
BBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)BUCAP00347UniProtKB/Swiss-Prot TRUB_BUCAPtRNA pseudouridine synthase B
BErwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3)ERWAE03065ncbi logo CBJ47743.1tRNA pseudouridine synthase B
BErwinia amylovora (strain CFBP1430)ERWAC00351UniProtKB/TrEMBL D4HV20tRNA pseudouridine 5S synthase tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
BErwinia billingiae (strain Eb661)ERWBE03998UniProtKB/TrEMBL D8MXH4tRNA pseudouridine synthase B silverDB:661Eb05244 pmp logo
BErwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96)ERWP600375UniProtKB/TrEMBL D2TDL4tRNA pseudouridine 5S synthase tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
BErwinia pyrifoliae (strain Ep1/96)ERWPE00362ncbi logo CAX54121.1tRNA pseudouridine synthase B silverDB:cEP00363
BErwinia sp. (strain Ejp617)ERWSE01502UniProtKB/TrEMBL E3DEA2tRNA pseudouridine synthase B
BErwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99)ERWT900349UniProtKB/TrEMBL B2VGN4tRNA pseudouridine synthase B
BPantoea ananatis (strain AJ13355)PANAA03599UniProtKB/TrEMBL A0A0H3L9V7tRNA pseudouridine synthase B TruB similar to Erwinia tasmaniensis Et1/99, tRNA pseudouridine synthase B (NCBI: YP_001906303.1) COG: translation, ribosomal structure and biogenesis subcellular localization as predicted by Psort 2.0: cytoplasmic pmp logo
BPantoea ananatis (strain LMG 20103)PANAM00459UniProtKB/TrEMBL D4GI96tRNA pseudouridine synthase B pmp logo
BPantoea sp. (strain At-9b)PANSA00504UniProtKB/TrEMBL E6WIP6tRNA pseudouridine synthase B KEGG: ctu:Ctu_04120 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B pmp logo
BPantoea vagans (strain C9-1)PANVC03575UniProtKB/TrEMBL E1SC87tRNA pseudouridine 5S synthase Pseudouridine synthase
BEdwardsiella ictaluri (strain 93-146)EDWI900437UniProtKB/TrEMBL C5BFB9tRNA pseudouridine synthase B
BEdwardsiella tarda (strain EIB202)EDWTE00403UniProtKB/TrEMBL D0ZB76tRNA pseudouridine synthase B pmp logo
BEdwardsiella tarda (strain FL6-60)EDWTF00360UniProtKB/TrEMBL A0A0H3DPR2tRNA pseudouridine synthase B pmp logo
BPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)PHOAA03943UniProtKB/TrEMBL B6VLH0tRNA pseudouridine synthase B
BPhotorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)PHOLL04386UniProtKB/Swiss-Prot TRUB_PHOLLtRNA pseudouridine synthase B
BProteus mirabilis (strain HI4320)PROMH03385UniProtKB/TrEMBL B4F2C1tRNA pseudouridine synthase B
BProvidencia stuartii (strain MRSN 2154)PROSM02358UniProtKB/TrEMBL A0A140NN24tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BXenorhabdus bovienii (strain SS-2004)XENBS00354UniProtKB/TrEMBL D3UYZ2tRNA pseudouridine 5S synthase
BXenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)XENNA00474UniProtKB/TrEMBL D3VIN1tRNA pseudouridine 5S synthase pmp logo
BDickeya chrysanthemi (strain Ech1591)DICC103350UniProtKB/TrEMBL C6CJP3tRNA pseudouridine synthase B pmp logo
BDickeya dadantii (strain 3937)DICD300623UniProtKB/TrEMBL E0SKY3tRNA pseudouridine synthase B
BDickeya paradisiaca (strain Ech703)DICP703278UniProtKB/TrEMBL C6CE12tRNA pseudouridine synthase B pmp logo
BDickeya zeae (strain Ech586)DICZ500597UniProtKB/TrEMBL D2BRU2tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: dze:Dd1591_3463 tRNA pseudouridine synthase B
BPectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)PECAS00704UniProtKB/Swiss-Prot TRUB_PECAStRNA pseudouridine synthase B Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 tRNA pseudouridine synthase B TruB or P35 or b3166 or c3922 or z4527 or ecs4047 SWALL:TRUB_ECOLI (SWALL:P09171) (314 aa) fasta scores: E(): 3.2e-92, 76.35% id in 313 aa
BPectobacterium carotovorum subsp. carotovorum (strain PC1)PECCP00578UniProtKB/TrEMBL C6DKK5tRNA pseudouridine synthase B
BPectobacterium parmentieri (strain WPP163)PECPW00757UniProtKB/TrEMBL D0KHM7tRNA pseudouridine synthase B
BPectobacterium sp. (strain SCC3193)PECSS00692UniProtKB/TrEMBL A0A0H3I4P0tRNA pseudouridine synthase B
BSodalis glossinidius (strain morsitans)SODGM00372UniProtKB/Swiss-Prot TRUB_SODGMtRNA pseudouridine synthase B pmp logo
BRahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65)RAHAC00490UniProtKB/TrEMBL H2ISX9tRNA pseudouridine 55 synthase PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BRahnella sp. (strain Y9602)RAHSY00480UniProtKB/TrEMBL A0A0H3FAQ2tRNA pseudouridine synthase B KEGG: spe:Spro_0491 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B pmp logo
BSerratia fonticolaSERFO01998UniProtKB/TrEMBL A0A0F7D1T0tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
BSerratia plymuthica (strain AS9)SERSA00421ncbi logo AEF43587.1tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: spe:Spro_0491 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type
BSerratia proteamaculans (strain 568)SERP500486UniProtKB/Swiss-Prot TRUB_SERP5tRNA pseudouridine synthase B
BYersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)YERE800413UniProtKB/Swiss-Prot TRUB_YERE8TRNA pseudouridine synthase B
BYersinia enterocolitica subsp. palearctica serotype O:3 (strain DSM 13030 / CIP 106945 / Y11)YERE103608UniProtKB/TrEMBL A0A0H3NYT0tRNA pseudouridine synthase B; tRNA Psi55
BYersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))YERE300454ncbi logo ADZ40955.1
BYersinia pestisYERPE03215UniProtKB/Swiss-Prot TRUB_YERPEtRNA pseudouridine synthase B pmp logo
BYersinia pestis (strain D106004)YERPD03126ncbi logo ACY60160.1tRNA pseudouridine synthase B
BYersinia pestis (strain D182038)YERP102935ncbi logo ACY63743.1tRNA pseudouridine synthase B
BYersinia pestis (strain Pestoides F)YERPP03350UniProtKB/Swiss-Prot TRUB_YERPPTRNA pseudouridine synthase B
BYersinia pestis (strain Z176003)YERPZ03127ncbi logo ADE66173.1tRNA pseudouridine synthase B
BYersinia pestis bv. Antiqua (strain Angola)YERPG03438ncbi logo ABX87309.1tRNA pseudouridine synthase B
BYersinia pestis bv. Antiqua (strain Antiqua)YERPA00040UniProtKB/Swiss-Prot TRUB_YERPATRNA pseudouridine synthase B pmp logo
BYersinia pestis bv. Antiqua (strain Nepal516)YERPN03101UniProtKB/Swiss-Prot TRUB_YERPNTRNA pseudouridine synthase B
BYersinia pestis bv. Medievalis (strain Harbin 35)YERPH00462ncbi logo ADV97268.1tRNA U55 pseudouridine synthase
BYersinia pseudotuberculosis serotype I (strain IP32953)YERPS00478UniProtKB/Swiss-Prot TRUB_YERPStRNA pseudouridine synthase B
BYersinia pseudotuberculosis serotype IB (strain PB1/+)YERPB00491ncbi logo ACC87498.1tRNA pseudouridine synthase B
BYersinia pseudotuberculosis serotype O:1b (strain IP 31758)YERP303524UniProtKB/Swiss-Prot TRUB_YERP3tRNA pseudouridine synthase B
BYersinia pseudotuberculosis serotype O:3 (strain YPIII)YERPY03658UniProtKB/TrEMBL A0A0H3B6R3tRNA pseudouridine synthase B pmp logo
BCoxiella burnetii (strain CbuG_Q212)COXB200505ncbi logo ACJ17991.1tRNA pseudouridine synthase B
BCoxiella burnetii (strain CbuK_Q154)COXB100534ncbi logo ACJ19873.1tRNA pseudouridine synthase B
BCoxiella burnetii (strain Dugway 5J108-111)COXBN00527UniProtKB/Swiss-Prot TRUB_COXBNtRNA pseudouridine synthase B
BCoxiella burnetii (strain RSA 331 / Henzerling II)COXBR01321UniProtKB/Swiss-Prot TRUB_COXBRtRNA pseudouridine synthase B
BCoxiella burnetii (strain RSA 493 / Nine Mile phase I)COXBU01210UniProtKB/Swiss-Prot TRUB_COXBUtRNA pseudouridine synthase B
BLegionella pneumophila (strain Corby)LEGPC02943UniProtKB/Swiss-Prot TRUB_LEGPCTRNA pseudouridine synthase B
BLegionella pneumophila (strain Lens)LEGPL02684UniProtKB/Swiss-Prot TRUB_LEGPLtRNA pseudouridine synthase B
BLegionella pneumophila (strain Paris)LEGPA02805UniProtKB/Swiss-Prot TRUB_LEGPAtRNA pseudouridine synthase B
BLegionella pneumophila serogroup 1 (strain 2300/99 Alcoy)LEGP202910ncbi logo ADG26163.1tRNA pseudouridine synthase B COG0130, TruB, Pseudouridine synthase [Translation, ribosomal structure and biogenesis]
BLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)LEGPH01211UniProtKB/Swiss-Prot Q5ZRV6tRNA pseudouridine synthase B conserved gene
BTatlockia micdadeiTATMI00239UniProtKB/TrEMBL A0A098GCB9tRNA pseudouridine synthase B
BMethylomicrobium alcaliphilumMETAA00913ncbi logo CCE22629.1tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10924141, 11142385, 15581587; Product type e : enzyme
BMethylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z)META200913UniProtKB/TrEMBL G4T3D7tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10924141, 11142385, 15581587; Product type e : enzyme pmp logo
BMethylomonas methanica (strain MC09)METMM01228UniProtKB/TrEMBL F9ZXA5tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: csa:Csal_3072 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type pmp logo
BAlcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)ALCBS00330UniProtKB/TrEMBL Q0VSR9Pseudouridylate synthase pmp logo
BAlcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5)ALCDB03800UniProtKB/TrEMBL K0CHM9tRNA pseudouridine synthase B pmp logo
BHahella chejuensis (strain KCTC 2396)HAHCH01182UniProtKB/Swiss-Prot TRUB_HAHCHtRNA pseudouridine synthase B TIGRFAMsMatches:TIGR00431
BChromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)CHRSD03051UniProtKB/Swiss-Prot TRUB_CHRSDtRNA pseudouridine synthase B
BHalomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)HALED03132UniProtKB/TrEMBL E1VAS0tRNA pseudouridine synthase B High confidence in function and specificity pmp logo
BKangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125)KANKD00305UniProtKB/TrEMBL C7R7H9tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: aha:AHA_3301 tRNA pseudouridine synthase B pmp logo
BMarinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)MARM100949UniProtKB/TrEMBL F2K4F7tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: mmw:Mmwyl1_1029 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal pmp logo
BMarinomonas sp. (strain MWYL1)MARMS01012UniProtKB/Swiss-Prot TRUB_MARMStRNA pseudouridine synthase B
BNeptuniibacter caesariensisNEPCE01784UniProtKB/TrEMBL Q2BH44tRNA pseudouridine synthase B COG0130 Pseudouridine synthase pmp logo
BActinobacillus pleuropneumoniae serotype 3 (strain JL03)ACTPJ00593UniProtKB/TrEMBL B0BNR7tRNA pseudouridine synthase B pmp logo
BActinobacillus pleuropneumoniae serotype 5b (strain L20)ACTP200634UniProtKB/Swiss-Prot TRUB_ACTP2TRNA pseudouridine synthase B
BActinobacillus pleuropneumoniae serotype 7 (strain AP76)ACTP700664UniProtKB/TrEMBL B3H165tRNA pseudouridine synthase B
BActinobacillus succinogenes (strain ATCC 55618 / 130Z)ACTSZ01105UniProtKB/Swiss-Prot TRUB_ACTSZtRNA pseudouridine synthase B
BAggregatibacter actinomycetemcomitans serotype C (strain D11S-1)AGGAD01155UniProtKB/TrEMBL C9R449tRNA pseudouridine synthase B
BAggregatibacter aphrophilus (strain NJ8700)AGGAN00904ncbi logo ACS97355.1tRNA pseudouridine synthase B identified by Glimmer3; putative; (tRNA pseudouridine 55synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNApseudouridylate synthase)
BMannheimia succiniciproducens (strain MBEL55E)MANSM01435UniProtKB/Swiss-Prot TRUB_MANSMTruB protein Pseudouridine synthase
BGallibacterium anatis (strain UMN179)GALAU02119UniProtKB/TrEMBL F4HF94tRNA pseudouridine synthase B pmp logo
BHaemophilus ducreyi (strain 35000HP / ATCC 700724)HAEDU01219UniProtKB/Swiss-Prot TRUB_HAEDUtRNA pseudouridine synthase B
BHaemophilus influenzae (strain 10810)HAEI101421UniProtKB/TrEMBL E1X7A9tRNA pseudouridine synthase
BHaemophilus influenzae (strain 86-028NP)HAEI801603UniProtKB/Swiss-Prot TRUB_HAEI8tRNA pseudouridine synthase B tRNA pseudouridine 55 synthase; Psi55 synthase; pseudouridylate synthase; Uracil hydrolyase; Similar to: HI1289, TRUB_HAEIN
BHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)HAEIN01264UniProtKB/Swiss-Prot TRUB_HAEINtRNA pseudouridine synthase B
BHaemophilus influenzae (strain PittEE)HAEIE00736UniProtKB/Swiss-Prot TRUB_HAEIEtRNA pseudouridine synthase B
BHaemophilus influenzae (strain PittGG)HAEIG00255UniProtKB/Swiss-Prot TRUB_HAEIGtRNA pseudouridine synthase B
BHaemophilus influenzae (strain R2846 / 12)HAEI200749ncbi logo ADO96218.1tRNA pseudouridine synthase B
BHaemophilus influenzae (strain R2866)HAEI600823ncbi logo ADO80820.1tRNA pseudouridine synthase B
BHaemophilus parainfluenzae (strain T3T1)HAEP301563UniProtKB/TrEMBL E1W5N2tRNA pseudouridine synthase pmp logo
BHaemophilus parasuis serovar 5 (strain SH0165)HAEPS00577UniProtKB/TrEMBL B8F4P2tRNA pseudouridine synthase B
BHaemophilus somnus (strain 129Pt)HAES100824UniProtKB/Swiss-Prot TRUB_HAES1tRNA pseudouridine synthase B
BHistophilus somni (strain 2336)HISS201254UniProtKB/Swiss-Prot TRUB_HISS2tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B KEGG: hso:HS_0823 tRNA pseudouridine synthase B
BPasteurella multocida (strain HN06)PASMH00793ncbi logo AFF24069.1tRNA pseudouridine synthase B
BPasteurella multocida (strain Pm70)PASMU00756UniProtKB/Swiss-Prot TRUB_PASMUtRNA pseudouridine synthase B
BAcinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)ACIAD02964UniProtKB/Swiss-Prot TRUB_ACIADtRNA pseudouridine 55 synthase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme
BAcinetobacter baumannii (strain 1656-2)ACIB103329ncbi logo ADX05040.1tRNA pseudouridine 55 synthase
BAcinetobacter baumannii (strain AB0057)ACIB503425ncbi logo ACJ42973.1tRNA pseudouridine synthase B
BAcinetobacter baumannii (strain AB307-0294)ACIB300343ncbi logo ACJ57875.1tRNA pseudouridine synthase B
BAcinetobacter baumannii (strain ACICU)ACIBC03345ncbi logo ACC58667.1Pseudouridine synthase
BAcinetobacter baumannii (strain AYE)ACIBY00311UniProtKB/TrEMBL B0V8J5tRNA pseudouridine 55 synthase pmp logo
BAcinetobacter baumannii (strain SDF)ACIBS00275UniProtKB/TrEMBL B0VQ63tRNA pseudouridine 55 synthase pmp logo
BAcinetobacter baumannii (strain TCDC-AB0715)ACIBD03417ncbi logo ADX93987.1tRNA pseudouridine synthase B
BAcinetobacter calcoaceticus (strain PHEA-2)ACICP02621UniProtKB/TrEMBL F0KFX7tRNA pseudouridine 55 synthase
BAcinetobacter oleivorans (strain JCM 16667 / KCTC 23045 / DR1)ACISD00333UniProtKB/TrEMBL D8JMB8tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BMoraxella catarrhalis (strain RH4)MORCR01741ncbi logo ADG62019.1tRNA pseudouridine synthase B
BPsychrobacter sp. (strain PRwf-1)PSYWF00157UniProtKB/TrEMBL A5WBS7tRNA pseudouridine synthase B pmp logo
BAzotobacter vinelandii (strain DJ / ATCC BAA-1303)AZOVD04074UniProtKB/TrEMBL C1DFK7tRNA pseudouridine synthase B pmp logo
BPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)PSEAE04729UniProtKB/Swiss-Prot TRUB_PSEAEtRNA pseudouridine synthase B
BPseudomonas aeruginosa (strain LESB58)PSEA805099ncbi logo CAW29881.1tRNA pseudouridine 55 synthase
BPseudomonas aeruginosa (strain PA7)PSEA705348UniProtKB/Swiss-Prot TRUB_PSEA7tRNA pseudouridine synthase B
BPseudomonas aeruginosa (strain UCBPP-PA14)PSEAB05045UniProtKB/Swiss-Prot TRUB_PSEABtRNA pseudouridine 55 synthase
BPseudomonas brassicacearum (strain NFM421)PSEBN00820UniProtKB/TrEMBL F2K867tRNA pseudouridine synthase B; TruB family pseudouridylate synthase (N terminal domain)
BPseudomonas entomophila (strain L48)PSEE400713UniProtKB/Swiss-Prot TRUB_PSEE4tRNA pseudouridine 55 synthase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme
BPseudomonas fluorescens (strain Pf0-1)PSEPF00775UniProtKB/Swiss-Prot TRUB_PSEPFtRNA pseudouridine synthase B
BPseudomonas fluorescens (strain SBW25)PSEFS05125UniProtKB/TrEMBL C3K257
BPseudomonas fulva (strain 12-X)PSEF103555UniProtKB/TrEMBL F6AE32tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: pmy:Pmen_3606 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal pmp logo
BPseudomonas mendocina (strain NK-01)PSEMN03908UniProtKB/TrEMBL F4DVV2tRNA pseudouridine synthase B
BPseudomonas mendocina (strain ymp)PSEMY03551UniProtKB/Swiss-Prot TRUB_PSEMYtRNA pseudouridine synthase B
BPseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)PSEF500824UniProtKB/Swiss-Prot TRUB_PSEF5tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM PF09157; match to protein family HMM TIGR00431
BPseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)PSEP104511UniProtKB/Swiss-Prot TRUB_PSEP1tRNA pseudouridine synthase B
BPseudomonas putida (strain BIRD-1)PSEPB04271ncbi logo ADR61984.1TruB tRNA pseudouridine synthase B
BPseudomonas putida (strain GB-1)PSEPG04669UniProtKB/Swiss-Prot TRUB_PSEPGtRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B KEGG: pen:PSEEN0797 tRNA pseudouridine 55 synthase
BPseudomonas putida (strain W619)PSEPW00721UniProtKB/TrEMBL B1J2B1tRNA pseudouridine synthase B pmp logo
BPseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)PSE1403935UniProtKB/Swiss-Prot TRUB_PSE14tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BPseudomonas stutzeri (strain A1501)PSEU503200UniProtKB/Swiss-Prot TRUB_PSEU5TRNA pseudouridine 55 synthase
BPseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)PSEUT03327ncbi logo AEJ06636.1tRNA pseudouridine 55 synthase
BPseudomonas syringae pv. syringae (strain B728a)PSEU204160UniProtKB/Swiss-Prot TRUB_PSEU2tRNA pseudouridine synthase B
BPseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)PSESM04247UniProtKB/TrEMBL A0PCI9tRNA pseudouridine synthase B pmp logo
BFrancisella philomiragia subsp. philomiragia (strain ATCC 25017)FRAP201186UniProtKB/Swiss-Prot TRUB_FRAP2tRNA pseudouridine synthase B
BFrancisella cf. novicida (strain 3523)FRACN01529UniProtKB/TrEMBL F4BH88tRNA pseudouridine synthase B
BFrancisella cf. novicida (strain Fx1)FRACF01491ncbi logo AEE87885.1tRNA pseudouridine synthase B
BFrancisella tularensis subsp. novicida (strain U112)FRATN01419UniProtKB/Swiss-Prot TRUB_FRATNtRNA pseudouridine synthase B
BFrancisella tularensis subsp. holarctica (strain FTNF002-00 / FTA)FRATF00441UniProtKB/Swiss-Prot TRUB_FRATFtRNA pseudouridine synthase B
BFrancisella tularensis subsp. holarctica (strain LVS)FRATH00509UniProtKB/Swiss-Prot TRUB_FRATHtRNA pseudouridine synthetase B
BFrancisella tularensis subsp. holarctica (strain OSU18)FRATO00435UniProtKB/Swiss-Prot TRUB_FRATOPseudouridylate synthase
BFrancisella tularensis subsp. mediasiatica (strain FSC147)FRATM00275ncbi logo ACD30395.1tRNA pseudouridine synthase B
BFrancisella tularensis subsp. tularensis (strain FSC 198)FRAT101483UniProtKB/Swiss-Prot TRUB_FRAT1tRNA pseudouridine synthetase B Similar to P72154 tRNA pseudouridine synthase B from Pseudomonas aeruginosa (304 aa). FASTA: opt: 831 Z-score: 970.0 E(): 3.5e-46 Smith-Waterman score: 831; 43.854 identity in 301 aa overlap
BFrancisella tularensis subsp. tularensis (strain NE061598)FRATE01418ncbi logo ADA79201.1tRNA pseudouridine synthetase B
BFrancisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)FRATT01483UniProtKB/Swiss-Prot TRUB_FRATTtRNA pseudouridine synthetase B Similar to P72154 tRNA pseudouridine synthase B from Pseudomonas aeruginosa (304 aa). FASTA: opt: 831 Z-score: 970.0 E(): 3.5e-46 Smith-Waterman score: 831; 43.854 identity in 301 aa overlap pmp logo
BFrancisella tularensis subsp. tularensis (strain WY96-3418)FRATW00268UniProtKB/Swiss-Prot TRUB_FRATWTRNA pseudouridine synthase B
BCycloclasticus sp. (strain P1)CYCSP01570UniProtKB/TrEMBL K0C7N1tRNA pseudouridine synthase B pmp logo
BMethylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7)METFJ00562UniProtKB/TrEMBL I1YFQ4tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BMethylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)METNJ01266UniProtKB/TrEMBL I1XIB4tRNA pseudouridine synthase B PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BThioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1)THICA00858UniProtKB/TrEMBL F6DCP9tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: tcx:Tcr_1125 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal
BThiomicrospira crunogena (strain XCL-2)THICR01124UniProtKB/Swiss-Prot Q31GK3tRNA pseudouridine synthase B KEGG: aci:ACIAD3307 tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB-like
BVibrio fischeri (strain ATCC 700601 / ES114)VIBF100478UniProtKB/Swiss-Prot TRUB_VIBF1tRNA pseudouridine synthase
BVibrio fischeri (strain MJ11)VIBFM00470UniProtKB/Swiss-Prot TRUB_VIBFMtRNA pseudouridine synthase B
BAliivibrio salmonicida (strain LFI1238)ALISL00510UniProtKB/Swiss-Prot TRUB_ALISLtRNA pseudouridine synthase B
BPhotobacterium profundum (strain SS9)PHOPR03530UniProtKB/Swiss-Prot TRUB_PHOPRputative tRNA pseudouridine 5S synthase predicted by orpheus program predicted by glimmer program
BVibrio anguillarum (strain ATCC 68554 / 775)VIBA702387UniProtKB/TrEMBL F7YP30tRNA pseudouridine synthase B pmp logo
BVibrio antiquarius (strain Ex25)VIBAE01000UniProtKB/TrEMBL A7K323tRNA pseudouridine synthase B pmp logo
BVibrio campbellii (strain ATCC BAA-1116 / BB120)VIBCB02911UniProtKB/Swiss-Prot TRUB_VIBCBtRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
BVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)VIBCH00629UniProtKB/Swiss-Prot TRUB_VIBCHtRNA pseudouridine synthase B
BVibrio cholerae serotype O1 (strain MJ-1236)VIBCJ02662ncbi logo ACQ61922.1tRNA pseudouridine synthase B
BVibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)VIBC300165UniProtKB/Swiss-Prot TRUB_VIBC3TRNA pseudouridine 55 synthase
BVibrio cholerae serotype O1 (strain M66-2)VIBCM00588UniProtKB/Swiss-Prot TRUB_VIBCM
BVibrio furnissii (strain DSM 14383 / NCTC 11218)VIBFN00889UniProtKB/TrEMBL F0LTQ1tRNA pseudouridine synthase B COG0130 pmp logo
BVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)VIBPA02444UniProtKB/Swiss-Prot TRUB_VIBPAtRNA pseudouridine synthase B
BVibrio tasmaniensis (strain LGP32)VIBTL02348UniProtKB/Swiss-Prot TRUB_VIBTLtRNA pseudouridine 55 synthase
BVibrio vulnificus (strain CMCP6)VIBVU01520UniProtKB/Swiss-Prot TRUB_VIBVUtRNA pseudouridine synthase B
BVibrio vulnificus (strain MO6-24/O)VIBVM00594ncbi logo ADV85619.1tRNA pseudouridine synthase B tRNA Psi55
BVibrio vulnificus (strain YJ016)VIBVY02677UniProtKB/Swiss-Prot TRUB_VIBVYtRNA pseudouridine synthase B
BFrateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370)FRAAD01043UniProtKB/TrEMBL H8L3B8tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BLysobacter enzymogenesLYSEN02155UniProtKB/TrEMBL A0A0S2DFZ0tRNA pseudouridine synthase B
BPseudoxanthomonas spadix (strain BD-a59)PSEUP01905UniProtKB/TrEMBL G7UP63tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BPseudoxanthomonas suwonensis (strain 11-1)PSEUU01804UniProtKB/TrEMBL E6WU20tRNA pseudouridine synthase B KEGG: xca:xccb100_1651 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II ; tRNA pseudouridine synthase B
BStenotrophomonas maltophilia (strain K279a)STRMK03169UniProtKB/TrEMBL B2FN88Putative tRNA pseudouridine synthase B pmp logo
BStenotrophomonas maltophilia (strain R551-3)STRM502798UniProtKB/TrEMBL B4SQR8tRNA pseudouridine synthase B pmp logo
BXanthomonas albilineans (strain GPE PC73 / CFBP 7063)XANAP00986UniProtKB/TrEMBL D2UCR4probable trna pseudouridine synthase b protein
BXanthomonas campestris pv. campestris (strain 8004)XANC801561UniProtKB/Swiss-Prot TRUB_XANC8tRNA pseudouridine synthase B
BXanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)XANCP02433UniProtKB/Swiss-Prot TRUB_XANCPtRNA pseudouridine synthase B
BXanthomonas campestris pv. campestris (strain B100)XANCB01649UniProtKB/Swiss-Prot TRUB_XANCBtRNA pseudouridine synthase B
BXanthomonas axonopodis pv. citri (strain 306)XANAC02603UniProtKB/Swiss-Prot TRUB_XANACtRNA pseudouridine synthase B
BXanthomonas campestris pv. vesicatoria (strain 85-10)XANC502763UniProtKB/Swiss-Prot TRUB_XANC5tRNA pseudouridine synthase B
BXanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)XANOR03009UniProtKB/Swiss-Prot TRUB_XANORtRNA pseudouridine synthase B identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark
BXanthomonas oryzae pv. oryzae (strain MAFF 311018)XANOM02912UniProtKB/Swiss-Prot TRUB_XANOMtRNA pseudouridine synthase B identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker
BXanthomonas oryzae pv. oryzae (strain PXO99A)XANOP03035UniProtKB/TrEMBL A0A0K0GMN8tRNA pseudouridine synthase B
BXylella fastidiosa (strain 9a5c)XYLFA00235UniProtKB/Swiss-Prot TRUB_XYLFAtRNA pseudouridine synthase B
BXylella fastidiosa (strain M12)XYLFM00182ncbi logo ACA11238.1Pseudouridylate synthase
BXylella fastidiosa (strain M23)XYLF200178UniProtKB/TrEMBL B2I728tRNA pseudouridine synthase B
BXylella fastidiosa (strain Temecula1 / ATCC 700964)XYLFT00177UniProtKB/Swiss-Prot TRUB_XYLFTtRNA pseudouridine synthase B
BXylella fastidiosa (strain GB514)XYLFG01136ncbi logo ADN63185.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BBaumannia cicadellinicola subsp. Homalodisca coagulataBAUCH00575UniProtKB/Swiss-Prot TRUB_BAUCHtRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BVesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA)VESOH00059UniProtKB/TrEMBL A5CXX8TRNA pseudouridine synthase B pmp logo
BRuthia magnifica subsp. Calyptogena magnificaRUTMC00054UniProtKB/TrEMBL A1AVA1TRNA pseudouridine synthase B pmp logo
BBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)BDEBA01406UniProtKB/Swiss-Prot TRUB_BDEBAtRNA pseudouridine synthase B
BDesulfatibacillum alkenivorans (strain AK-01)DESAA04651UniProtKB/TrEMBL B8FCY8tRNA pseudouridine synthase B pmp logo
BDesulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)DESAH00451UniProtKB/TrEMBL C0QHM4TruB pmp logo
BDesulfobacula toluolica (strain DSM 7467 / Tol2)DESTT00448UniProtKB/TrEMBL K0NCQ6TruB: tRNA pseudouridine synthase B pmp logo
BDesulfococcus oleovorans (strain DSM 6200 / Hxd3)DESOH03014UniProtKB/TrEMBL A8ZZ61tRNA pseudouridine synthase B pmp logo
BDesulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3)DESPD02833UniProtKB/TrEMBL E8RDN1tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501: IPR014780; KEGG: dps:DP2610 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BDesulfocapsa sulfexigens (strain DSM 10523 / SB164P1)DESSD00010UniProtKB/TrEMBL M1P4I1tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
BDesulfotalea psychrophila (strain LSv54 / DSM 12343)DESPS02610UniProtKB/Swiss-Prot TRUB_DESPStRNA pseudouridine synthase B
BDesulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2)DESAT01827UniProtKB/TrEMBL D6Z4T2tRNA pseudouridine synthase B pmp logo
BDesulfohalobium retbaense (strain ATCC 49708 / DSM 5692 / JCM 16813 / HR100)DESRD00477UniProtKB/TrEMBL C8X0G3tRNA pseudouridine synthase B pmp logo
BDesulfomicrobium baculatum (strain DSM 4028 / VKM B-1378)DESBD02352UniProtKB/TrEMBL C7LRI9tRNA pseudouridine synthase B pmp logo
BDesulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2)DESAO02107ncbi logo ADU63155.1tRNA pseudouridine synthase B KEGG: dsa:Desal_0998 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
BDesulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949)DESDA00056UniProtKB/TrEMBL B8J1Y1tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: dvl:Dvul_2436 tRNA pseudouridine synthase B pmp logo
BDesulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1)DESMR03132UniProtKB/TrEMBL C4XJA4tRNA pseudouridine synthase B pmp logo
BDesulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30)DESPC00761ncbi logo CCH48006.1tRNA pseudouridine synthase B
BDesulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)DESAD00991UniProtKB/TrEMBL C6C0C9tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: dde:Dde_3165 tRNA pseudouridine synthase B pmp logo
BDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)DESVH00496UniProtKB/Swiss-Prot TRUB_DESVHtRNA pseudouridine synthase B
BDesulfovibrio vulgaris (strain Miyazaki F / DSM 19637)DESVM02485UniProtKB/Swiss-Prot TRUB_DESVMtRNA pseudouridine synthase B
BDesulfovibrio vulgaris (strain RCH1)DESVR00460UniProtKB/TrEMBL A0A0E0SZC6tRNA pseudouridine synthase B
BDesulfovibrio vulgaris subsp. vulgaris (strain DP4)DESVV02422UniProtKB/TrEMBL A0A0H3A9U6TRNA pseudouridine synthase B pmp logo
BLawsonia intracellularis (strain PHE/MN1-00)LAWIP01004UniProtKB/TrEMBL Q1MPL8Pseudouridine synthase pmp logo
BHippea maritima (strain ATCC 700847 / DSM 10411 / MH2)HIPMA00699UniProtKB/TrEMBL F2LVA8tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780; IPR002501; KEGG: clj:CLJU_c13180 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BPelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1)PELCD01667UniProtKB/Swiss-Prot TRUB_PELCDtRNA pseudouridine synthase B
BPelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1)PELPD00915UniProtKB/TrEMBL A1AMM4tRNA pseudouridine synthase B KEGG: gme:Gmet_1589 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein pmp logo
BGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)GEOBB01286UniProtKB/TrEMBL B5EI61tRNA pseudouridine synthase B pmp logo
BGeobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)GEODF02667UniProtKB/TrEMBL B9M1G3tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: gur:Gura_1904 tRNA pseudouridine synthase B pmp logo
BGeobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)GEOLS01623UniProtKB/TrEMBL B3EAF0tRNA pseudouridine synthase B pmp logo
BGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)GEOMG01568UniProtKB/Swiss-Prot TRUB_GEOMGtRNA pseudouridine 55 synthase
BGeobacter sp. (strain M18)GEOS801134UniProtKB/TrEMBL E8WMY5tRNA pseudouridine synthase B KEGG: gbm:Gbem_1306 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BGeobacter sp. (strain M21)GEOSM02909UniProtKB/TrEMBL C6E2P7tRNA pseudouridine synthase B
BGeobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)GEOSL01565UniProtKB/Swiss-Prot TRUB_GEOSLtRNA pseudouridine synthase B
BGeobacter sulfurreducens (strain DL-1 / KN400)GEOSK01522ncbi logo ADI84425.1tRNA pseudouridine 55 synthase
BGeobacter uraniireducens (strain Rf4)GEOUR01817UniProtKB/Swiss-Prot TRUB_GEOURtRNA pseudouridine synthase B
BAnaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)ANAD201213UniProtKB/TrEMBL B8JFY9tRNA pseudouridine synthase B pmp logo
BAnaeromyxobacter dehalogenans (strain 2CP-C)ANADE01101UniProtKB/TrEMBL Q2IPZ4tRNA pseudouridine synthase B pmp logo
BAnaeromyxobacter sp. (strain Fw109-5)ANADF01132UniProtKB/TrEMBL A7H9F6tRNA pseudouridine synthase B pmp logo
BAnaeromyxobacter sp. (strain K)ANASK01153UniProtKB/TrEMBL B4UHG3tRNA pseudouridine synthase B pmp logo
BStigmatella aurantiaca (strain DW4/3-1)STIAD06098UniProtKB/TrEMBL E3FFM5tRNA pseudouridine synthase B pmp logo
BCorallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2)CORCM05949UniProtKB/TrEMBL H8MKY8tRNA pseudouridine synthase B pmp logo
BMyxococcus fulvus (strain ATCC BAA-855 / HW-1)MYXFH03564UniProtKB/TrEMBL F8CRI3tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BMyxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8)MYXSD02323UniProtKB/TrEMBL L7U7W9tRNA pseudouridine synthase B pmp logo
BMyxococcus xanthus (strain DK 1622)MYXXD01982UniProtKB/TrEMBL Q1DAM3tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BDesulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)DESAR02209UniProtKB/TrEMBL F2NFJ6tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR002501:IPR014780; KEGG: gsu:GSU1591 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; IMG reference gene:2504155849; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BDesulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1)DESTA02663UniProtKB/TrEMBL I4C7A2tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSyntrophobacter fumaroxidans (strain DSM 10017 / MPOB)SYNFM01213UniProtKB/Swiss-Prot TRUB_SYNFMtRNA pseudouridine synthase B KEGG: sat:SYN_01783 tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B PFAM: pseudouridylate synthase TruB domain protein
BArcobacter butzleri (strain RM4018)ARCB402013UniProtKB/TrEMBL A8EWH8tRNA pseudouridine synthase B pmp logo
BArcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI)ARCNC00450UniProtKB/TrEMBL D5V5T4tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR000253:IPR014780:IPR020103:IPR002501; KEGG: abu:Abu_2084 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: A8EWH8 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BCampylobacter concisus (strain 13826)CAMC101199UniProtKB/Swiss-Prot TRUB_CAMC1tRNA pseudouridine synthase B
BCampylobacter curvus (strain 525.92)CAMC501229UniProtKB/Swiss-Prot TRUB_CAMC5TruB family pseudouridylate synthase (N domain) protein
BCampylobacter fetus subsp. fetus (strain 82-40)CAMFF00677UniProtKB/TrEMBL A0RNV7tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BCampylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)CAMHC01043UniProtKB/TrEMBL A7I2C4tRNA pseudouridine synthase B pmp logo
BCampylobacter jejuni (strain RM1221)CAMJR01202UniProtKB/Swiss-Prot TRUB_CAMJRtRNA pseudouridine synthase B identified by similarity to SP:Q9WZW0; match to protein family HMM PF01509; match to protein family HMM TIGR00431
BCampylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)CAMJD00496UniProtKB/Swiss-Prot TRUB_CAMJDtRNA pseudouridine synthase B
BCampylobacter jejuni subsp. jejuni (strain IA3902)CAMJI01030ncbi logo ADC28683.1tRNA pseudouridine synthase B
BCampylobacter jejuni subsp. jejuni (strain S3)CAMJS01118ncbi logo ADT72872.1tRNA pseudouridine synthase B / Psi55 synthase
BCampylobacter jejuni subsp. jejuni serotype HS21 (strain M1 / 99/308)CAMJM01035ncbi logo ADN91274.1tRNA pseudouridine synthase B
BCampylobacter jejuni subsp. jejuni serotype HS:41 (strain ICDCCJ07001)CAMJC00965ncbi logo ADT66397.1
BCampylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)CAMJE01038UniProtKB/Swiss-Prot TRUB_CAMJEtRNA pseudouridine synthase B
BCampylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)CAMJJ01051UniProtKB/Swiss-Prot TRUB_CAMJJtRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BCampylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)CAMJ801037UniProtKB/Swiss-Prot TRUB_CAMJ8tRNA pseudouridine synthase B
BCampylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)CAMLR01011UniProtKB/TrEMBL B9KCU0tRNA pseudouridine synthase B pmp logo
BSulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3)SULBS01647UniProtKB/TrEMBL I3XYG4tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)SULD501588UniProtKB/TrEMBL D1B3H7Pseudouridylate synthase TruB domain protein pmp logo
BHelicobacter cinaedi (strain PAGU611)HELCP00780ncbi logo BAM12042.1tRNA pseudouridine synthase B
BHelicobacter hepaticus (strain ATCC 51449 / 3B1)HELHP00124UniProtKB/Swiss-Prot TRUB_HELHPtRNA pseudouridine synthase B
BSulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1)SULKY00506UniProtKB/TrEMBL E4U009tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501; KEGG: sdl:Sdel_1632 pseudouridylate synthase TruB domain protein; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10)SULAO01762UniProtKB/TrEMBL E0UQ71tRNA pseudouridine synthase B pmp logo
BWolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)WOLSU00805UniProtKB/Swiss-Prot TRUB_WOLSUtRNA pseudouridine synthase B
BNitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1)NITSE01341UniProtKB/TrEMBL E6WZB3tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501: IPR014780; KEGG: sun:SUN_0383 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BNitratiruptor sp. (strain SB155-2)NITSB01474UniProtKB/Swiss-Prot TRUB_NITSBtRNA pseudouridine synthase B
BSulfurovum sp. (strain NBC37-1)SULNB00383UniProtKB/Swiss-Prot TRUB_SULNBtRNA pseudouridine synthase B
BBrachyspira hyodysenteriae (strain ATCC 49526 / WA1)BRAHW00609UniProtKB/TrEMBL C0QZ24Pseudouridylate synthase pmp logo
BBrachyspira intermedia (strain ATCC 51140 / PWS/A)BRAIP01659UniProtKB/TrEMBL G0EIU3pseudouridylate synthase
BBrachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150)BRAM502730UniProtKB/TrEMBL D5U7V4tRNA pseudouridine synthase B KEGG: bhy:BHWA1_00616 pseudouridylate synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein pmp logo
BBrachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000)BRAP902255UniProtKB/TrEMBL D8IAD4pseudouridylate synthase pmp logo
BLeptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)LEPBP01487UniProtKB/TrEMBL B0SQH6tRNA pseudouridine synthase B pmp logo
BLeptospira biflexa serovar Patoc (strain Patoc 1 / Ames)LEPBA01439ncbi logo ABZ93987.1Pseudouridylate synthase, N-terminal subunit
BLeptospira borgpetersenii serovar Hardjo-bovis (strain JB197)LEPBJ00810UniProtKB/TrEMBL Q04U29Pseudouridylate synthase, N-terminal subunit cytoplasmic protein pmp logo
BLeptospira borgpetersenii serovar Hardjo-bovis (strain L550)LEPBL01792ncbi logo ABJ79498.1Pseudouridylate synthase, N-terminal subunit cytoplasmic protein
BLeptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)LEPIC02617UniProtKB/Swiss-Prot Q72NX5tRNA pseudouridine synthase B
BLeptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)LEPIN00937UniProtKB/Swiss-Prot Q8CXU1tRNA pseudouridine synthase B
BLeptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain IPAV)LEPII00745ncbi logo AER01576.1tRNA pseudouridine synthase B
BBorrelia crocidurae (strain Achema)BORCA00815UniProtKB/TrEMBL I0FDP0tRNA pseudouridine synthase B pmp logo
BBorrelia duttonii (strain Ly)BORDL00773UniProtKB/TrEMBL B5RMZ7tRNA pseudouridine 55 synthase pmp logo
BBorrelia hermsii (strain HS1 / DAH)BORHD00777ncbi logo AAX17300.1tRNA pseudouridine synthase B
BBorrelia recurrentis (strain A1)BORRA00759UniProtKB/TrEMBL B5RQE1tRNA pseudouridine 55 synthase
BBorrelia turicatae (strain 91E135)BORT900775UniProtKB/TrEMBL A1R0M8tRNA pseudouridine synthase B pmp logo
BBorrelia afzelii (strain PKo)BORAP00813UniProtKB/Swiss-Prot TRUB_BORAPTRNA pseudouridine 55 synthase
BBorreliella bavariensis (strain ATCC BAA-2496 / DSM 23469 / PBi)BORBP00792UniProtKB/Swiss-Prot TRUB_BORBPtRNA pseudouridine synthase B
BBorrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)BORBU00802UniProtKB/Swiss-Prot TRUB_BORBUtRNA pseudouridine synthase B
BBorrelia burgdorferi (strain N40)BORBN00770ncbi logo ADQ29453.1tRNA pseudouridine synthase B
BBorrelia burgdorferi (strain ZS7)BORBZ00768UniProtKB/Swiss-Prot TRUB_BORBZtRNA pseudouridine synthase B
BSediminispirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228)SEDSS01988UniProtKB/TrEMBL E1R1L1tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501:IPR014780; KEGG: bdu:BDU_811 tRNA pseudouridine 55 synthase; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1)SPHCD00581UniProtKB/TrEMBL F4GK52tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780:IPR002501; KEGG: sta:STHERM_c11160 tRNA pseudouridine 55 synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase II, TruB; IMG reference gene:2503956875; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy)SPHGB01366UniProtKB/TrEMBL F0RZ11tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: ssm:Spirs_2030 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II pmp logo
BSphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes)SPHPG00401UniProtKB/TrEMBL G8QW26tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSpirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692)SPIAZ01471UniProtKB/TrEMBL H9UJA4tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BSpirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1)SPITD01085UniProtKB/TrEMBL E0RSS4tRNA pseudouridine synthase B pmp logo
BSpirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203)SPITZ01122UniProtKB/TrEMBL G0GE64tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: sta:STHERM_c11160 tRNA pseudouridine 55 synthase; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type
BTreponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9)TREAZ01689UniProtKB/TrEMBL F5YBN3tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BTreponema caldarium (strain ATCC 51460 / DSM 7334 / H1)TRECH01323UniProtKB/TrEMBL F8F3C6tRNA pseudouridine synthase B pmp logo
BTreponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2)TREPZ02159UniProtKB/TrEMBL F5YM29tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 pmp logo
BAcetomicrobium mobile (strain ATCC BAA-54 / DSM 13181 / NGA)ACEMN00887UniProtKB/TrEMBL I4BWB0tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BAminobacterium colombiense (strain DSM 12261 / ALA-1)AMICL00940UniProtKB/TrEMBL D5EEW1tRNA pseudouridine synthase B pmp logo
BThermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883)THEAS00980UniProtKB/TrEMBL D1BAB8tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: xau:Xaut_0291 tRNA pseudouridine synthase B pmp logo
BThermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314)THELD00906UniProtKB/TrEMBL G7V9W1tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; InterPro IPR014780: IPR002501; KEGG: aco:Amico_0968 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B
BAcholeplasma laidlawii (strain PG-8A)ACHLI00782UniProtKB/Swiss-Prot TRUB_ACHLItRNA pseudouridine synthase B
BPhytoplasma mali (strain AT)PHYMT00292UniProtKB/TrEMBL B3QZX6tRNA pseudouridine synthase B pmp logo
BAster yellows witches'-broom phytoplasma (strain AYWB)AYWBP00475UniProtKB/Swiss-Prot TRUB_AYWBPtRNA pseudouridine synthase B
BOnion yellows phytoplasma (strain OY-M)ONYPE00236UniProtKB/Swiss-Prot TRUB_ONYPEtRNA pseudouridine synthase B
BPhytoplasma australiensePHYAS00724UniProtKB/TrEMBL B1VAZ4tRNA pseudouridine synthase B pmp logo
BMesoplasma florum (strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1)MESFL00283UniProtKB/Swiss-Prot TRUB_MESFLtRNA pseudouridine synthase B
BMycoplasma agalactiae (strain 5632)MYCA600217ncbi logo CBH40458.1tRNA pseudouridine synthase B
BMycoplasma agalactiae (strain PG2)MYCAP00226UniProtKB/TrEMBL A5IY15tRNA pseudouridine synthase B pmp logo
BMycoplasma arthritidis (strain 158L3-1)MYCA500212UniProtKB/TrEMBL B3PMC8tRNA pseudouridine synthase B pmp logo
BMycoplasma bovis (strain ATCC 25523 / PG45)MYCBG00516UniProtKB/TrEMBL E4Q0D7tRNA pseudouridine synthase B pmp logo
BMycoplasma bovis (strain Hubei-1)MYCBH00238ncbi logo AEI89958.1tRNA pseudouridine synthase B
BMycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154)MYCCT00311UniProtKB/Swiss-Prot TRUB_MYCCTtRNA pseudouridine synthase B, putative This gene has good similariy to the characterized 286 amino acid E. coli TruB protein for the first 2215 amino acids, after that there is no similarity. This also true for other mycoplasma tRNA pseudouridine synthases; identified by similarity to SP:P32732; match to protein family HMM PF01509; match to protein family HMM TIGR00431
BMycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147)MYCCR00496UniProtKB/TrEMBL C5J6V5tRNA pseudouridine synthase B pmp logo
BMycoplasma crocodyli (strain ATCC 51981 / MP145)MYCCM00153UniProtKB/TrEMBL D5E4Z4tRNA pseudouridine synthase B pmp logo
BMycoplasma cynos (strain C142)MYCC100204UniProtKB/TrEMBL L0RUE9tRNA pseudouridine synthase B
BMycoplasma fermentans (strain ATCC 19989 / NBRC 14854 / NCTC 10117 / PG18)MYCFP00359UniProtKB/TrEMBL C4XEQ3hypothetical protein
BMycoplasma fermentans (strain JER)MYCFJ00269ncbi logo ADN68905.1pseudouridylate synthase
BMycoplasma fermentans (strain M64)MYCFM00280ncbi logo ADV34325.1tRNA pseudouridine synthase B Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K03177
BMycoplasma gallisepticum (strain F)MYCGF00118ncbi logo ADC31065.1tRNA pseudouridine synthase B MGF_0879
BMycoplasma gallisepticum (strain R(high / passage 156))MYCGH00120ncbi logo ADC30301.1tRNA pseudouridine synthase B
BMycoplasma gallisepticum (strain R(low / passage 15 / clone 2))MYCGA00119UniProtKB/Swiss-Prot P59879tRNA pseudouridine synthase B
BMycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21)MYCHP00235UniProtKB/TrEMBL D1J822tRNA pseudouridine synthase B pmp logo
BMycoplasma hyopneumoniae (strain 168)MYCH100294UniProtKB/TrEMBL E4QSU9tRNA pseudouridine synthase B
BMycoplasma hyopneumoniae (strain 7448)MYCH700277UniProtKB/TrEMBL Q4A889tRNA pseudouridine synthase B identified by sequence similarity; putative; ORF located using Blastx;COG0130 pmp logo
BMycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110)MYCHJ00270UniProtKB/TrEMBL Q4AA62tRNA pseudouridine synthase B identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0130 pmp logo
BMycoplasma hyorhinis (strain HUB-1)MYCHH00521UniProtKB/TrEMBL E0TKY1tRNA pseudouridine synthase B pmp logo
BMycoplasma hyorhinis (strain MCLD)MYCHM00589ncbi logo AEC46166.1tRNA pseudouridine synthase B COG0130 Pseudouridine synthase
BMycoplasma leachii (strain 99/014/6)MYCL900139ncbi logo CBV66882.1tRNA pseudouridine synthase B
BMycoplasma leachii (strain DSM 21131 / NCTC 10133 / N29 / PG50)MYCLG00333UniProtKB/TrEMBL E4PTW0tRNA pseudouridine synthase B
BMycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711)MYCMO00468UniProtKB/Swiss-Prot TRUB_MYCMOtRNA pseudouridine synthase B
BMycoplasma mycoides subsp. mycoides SC (strain Gladysdale)MYCMG00344ncbi logo ADK69068.1tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431
BMycoplasma mycoides subsp. mycoides SC (strain PG1)MYCMS00317UniProtKB/Swiss-Prot TRUB_MYCMStRNA pseudouridine synthase B
BMycoplasma penetrans (strain HF-2)MYCPE00916UniProtKB/Swiss-Prot TRUB_MYCPEtRNA pseudouridine synthase B
BMycoplasma pulmonis (strain UAB CTIP)MYCPU00546UniProtKB/Swiss-Prot TRUB_MYCPUtRNA pseudouridine synthase B
BMycoplasma putrefaciens (strain ATCC 15718 / NCTC 10155 / C30 KS-1 / KS-1)MYCPK00431ncbi logo AEM68839.1tRNA pseudouridine synthase B Identified by match to HMM PF01509.1; identified by match to HMM TIGR00431.
BMycoplasma synoviae (strain 53)MYCS500558UniProtKB/TrEMBL Q4A5J8tRNA pseudouridine synthase B identified by sequence similarity; putative; ORF located using Blastx;COG0130 pmp logo
BUreaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736)UREP200357UniProtKB/Swiss-Prot TRUB_UREP2tRNA pseudouridine synthase B
BUreaplasma parvum serovar 3 (strain ATCC 700970)UREPA00356UniProtKB/Swiss-Prot TRUB_UREPAtRNA pseudouridine synthase B
BUreaplasma urealyticum serovar 10 (strain ATCC 33699 / Western)UREU100341UniProtKB/Swiss-Prot TRUB_UREU1tRNA pseudouridine synthase B
BThermobaculum terrenum (strain ATCC BAA-798 / YNP1)THET100896UniProtKB/TrEMBL D1CFW9tRNA pseudouridine synthase B pmp logo
BThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)THEID00204UniProtKB/TrEMBL F8A9F1tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase; InterPro IPR002501:IPR014780; KEGG: dal:Dalk_4741 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; IMG reference gene:2505283490; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BThermodesulfobacterium geofontis (strain OPF15)THEGP01047UniProtKB/TrEMBL F8C4R5tRNA pseudouridine synthase B TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: tye:THEYE_A0556 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal pmp logo
BKosmotoga olearia (strain TBF 19.5.1)KOSOT02018UniProtKB/TrEMBL C5CI77tRNA pseudouridine synthase B KEGG: pca:Pcar_1559 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; PUA domain containing protein; SMART: PUA domain containing protein pmp logo
BMarinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3)MARPK01262UniProtKB/TrEMBL H2J3A8tRNA pseudouridine 55 synthase PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase pmp logo
BPetrotoga mobilis (strain DSM 10674 / SJ95)PETMO01627UniProtKB/TrEMBL A9BI94tRNA pseudouridine synthase B pmp logo
BFervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)FERNB00990UniProtKB/TrEMBL A7HLU7tRNA pseudouridine synthase B pmp logo
BFervidobacterium pennivorans (strain DSM 9078 / Ven5)FERPD01160UniProtKB/TrEMBL H9UCV1tRNA pseudouridine synthase B PFAM: TruB family pseudouridylate synthase (N terminal domain) pmp logo
BThermosipho africanus (strain TCF52B)THEAB01265UniProtKB/TrEMBL B7ICP6tRNA pseudouridine synthase B pmp logo
BThermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429)THEM401024UniProtKB/Swiss-Prot TRUB_THEM4tRNA pseudouridine synthase B
BPseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO)PSELT01363UniProtKB/TrEMBL A8F702tRNA pseudouridine synthase B pmp logo
BThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)THEMA00846UniProtKB/Swiss-Prot TRUB_THEMAtRNA pseudouridine synthase B pmp logo
BThermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10)THENR00070UniProtKB/TrEMBL D2C5E3tRNA pseudouridine synthase B
BThermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E)THENN01718UniProtKB/TrEMBL B9KAB2tRNA pseudouridine synthase B pmp logo
BThermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP100071UniProtKB/Swiss-Prot TRUB_THEP1tRNA pseudouridine synthase B
BThermotoga sp. (strain RQ2)THESQ00071UniProtKB/TrEMBL A0A0F6AJ36tRNA pseudouridine synthase B
BMethylacidiphilum infernorum (isolate V4)METI402138UniProtKB/TrEMBL B3DZL5Pseudouridine synthase pmp logo
BOpitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1)OPITP02796UniProtKB/Swiss-Prot TRUB_OPITPtRNA pseudouridine synthase B
BCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24)CORAD01773UniProtKB/TrEMBL D5EK62tRNA pseudouridine synthase B pmp logo
BAkkermansia muciniphila (strain ATCC BAA-835 / Muc)AKKM800738UniProtKB/TrEMBL B2UQ50tRNA pseudouridine synthase B pmp logo