Entry RATNO13303 (F1M6K4)

ERattus norvegicus


General information

Description
PHD finger protein 21A [Source:RGD Symbol;Acc:1560612]
Organism
RATNO - Rattus norvegicus
Locus
Chromosome 3: join(81134678..81134731, 81140930..81140962, 81143175..81143240, 81231286..81231534, (more...)

IDs and Cross-references

Domain Architecture

Gene Ontology

other
GO termEvidence and reference
biological_process (GO:0008150) ND: GO_REF:015

Molecular function
GO termEvidence and reference
RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977) IBA: GO_REF:033
chromatin binding (GO:0003682) IDA: PMID:19439607
transcription cofactor activity (GO:0003712) IBA: GO_REF:033
zinc ion binding (GO:0008270) IEA: GO_REF:002
histone binding (GO:0042393) IBA: GO_REF:033
metal ion binding (GO:0046872) IEA: GO_REF:038

Cellular component
GO termEvidence and reference
histone deacetylase complex (GO:0000118) IBA: GO_REF:033
IEA: GO_REF:107
nucleus (GO:0005634) IDA: PMID:19439607
DNA repair complex (GO:1990391) IEA: GO_REF:107

Biological process
GO termEvidence and reference
regulation of transcription, DNA-templated (GO:0006355) IBA: GO_REF:033

Protein Sequence

MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK QKRVVEQLRK    60
NLIVKQEQPD KFQIQPLSQS ENKLQTAQQQ PLQPLQQQQQ QQQQQQQQQQ QQQQQQQQQH   120
AQQSAAPPSL TASQKTVTTA SMITTKTLPL VLKAATATMP ASVVGQRPTI AMVTAINSQK   180
AVLSTDVQNT PVNLQTSSKV TGPGAEAVQI VAKNTVTLQV QATPPQPIKV PQFIPPPRLT   240
PRPNFLPQVR PKPVAQNNIP IAPAPPPMLA APQLIQRPVM LTKFTPTTLP TSQNSIHPVR   300
VVNGQTATIA KTFPMAQLTS IVIATPGTRL AGPQTVQLSK PSLEKQTVKS HTEAEEKQAE   360
SRTVTPPAAP KPKREENPQK LAFMVSLGLV THDHLEEIQS KRQERKRRTT ANPVYSGAVF   420
EPERKKSAVT YLNSTMHPGT RKRGRPPKYN AVLGFGALTP TSPPSSHPDS PENEKTETTF   480
TFPAPVQPVS LPSPTSTDGD IHEDFCSVCR KSGQLLMCDT CSRVYHLDCL EPPLKTIPKG   540
MWICPRCQDQ MLKKEEAIPW PGTLAIVHSY IAYKAAKEEE KQKLLKWSSD LKQEREELEQ   600
KVKELSSSIS KCMEMKNTIL ARQKEMRSSL DKVKQLIRLI HGIDLSKPVD SEATVGALSN   660
GPDCTPPANA ASTPAPSPSS QSCTANCNQG EETK                               694