Species phylogeny in OMA Browser release Jan 2020 -1 LUCA 2157 Archaea 2012493HEIABHeimdallarchaeota archaeon (strain B3-JM-08) 374847KORCOKorarchaeum cryptofilum (strain OPF8) 1849166LOKACLokiarchaeota archaeon (strain CR_4) 2053491THOARThorarchaeota archaeon (strain OWC) 28889 Crenarchaeota 183924 Thermoprotei 871006 Acidilobales 666510ACIS3Acidilobus saccharovorans (strain DSM 16705 / JCM 18335 / VKM B-2471 / 345-15) 1056495CALLDCaldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) 114380 Desulfurococcales 2272 Desulfurococcaceae 272557AERPEAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) 2273 Desulfurococcus 490899DESA1Desulfurococcus amylolyticus (strain DSM 18924 / JCM 16383 / VKM B-2413 / 1221n) 765177DESM0Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) 453591IGNH4Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) 583356IGNAAIgnisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) 2279 Staphylothermus 591019STAHDStaphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) 399550STAMFStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) 1184251THEC1Thermogladius calderae (strain DSM 22663 / VKM B-2946 / 1633) 633148THEAMThermosphaera aggregans (strain DSM 11486 / M11TL) 2307 Pyrodictiaceae 415426HYPBUHyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) 2309PYROCPyrodictium occultum 694429PYRF1Pyrolobus fumarii (strain DSM 11204 / 1A) 1163730FERFKFervidicoccus fontis (strain DSM 19380 / JCM 18336 / VKM B-2539 / Kam940) 118883 Sulfolobaceae 933801ACIHWAcidianus hospitalis (strain W1) 41980 Metallosphaera 1006006METCRMetallosphaera cuprina (strain Ar-4) 399549METS5Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2) 2287 Saccharolobus solfataricus 555311SACS9Saccharolobus solfataricus (strain 98/2) 273057SACS2Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) 2284 Sulfolobus 330779SULACSulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) 43080 Sulfolobus islandicus 930943SULIHSulfolobus islandicus (strain HVE10/4) 425944SULIDSulfolobus islandicus (strain L.D.8.5 / Lassen #2) 429572SULILSulfolobus islandicus (strain L.S.2.15 / Lassen #1) 427317SULIMSulfolobus islandicus (strain M.14.25 / Kamchatka #1) 427318SULIASulfolobus islandicus (strain M.16.27) 426118SULIKSulfolobus islandicus (strain M.16.4 / Kamchatka #3) 930945SULIRSulfolobus islandicus (strain REY15A) 439386SULIYSulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) 419942SULINSulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) 273063SULTOSulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) 2266 Thermoproteales 368408THEPDThermofilum pendens (strain DSM 2475 / Hrk 5) 2267 Thermoproteaceae 397948CALMQCaldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) 2276 Pyrobaculum 178306PYRAEPyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) 340102PYRARPyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) 410359PYRCJPyrobaculum calidifontis (strain JCM 11548 / VA1) 384616PYRILPyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) 444157PYRNVPyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta)Thermoproteus neutrophilus 698757PYROTPyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) 2270 Thermoproteus 768679THETKThermoproteus tenax (strain ATCC 35583 / DSM 2078 / JCM 9277 / NBRC 100435 / Kra 1) 999630THEU7Thermoproteus uzoniensis (strain 768-20) 164450 Vulcanisaeta 572478VULDIVulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) 985053VULM7Vulcanisaeta moutnovskia (strain 768-28) 1052801CREASCrenarchaeota archaeon SCGC AAA471-B05 28890 Euryarchaeota 379546 Aciduliprofundum 439481ACIB4Aciduliprofundum boonei (strain DSM 19572 / T469) 673860ACIS0Aciduliprofundum sp. (strain MAR08-339) 2232 Archaeoglobaceae 2233 Archaeoglobus 224325ARCFUArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) 572546ARCPAArchaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) 693661ARCVSArchaeoglobus veneficus (strain DSM 11195 / SNP6) 589924FERPAFerroglobus placidus (strain DSM 10642 / AEDII12DO) 1051663 Nanohaloarchaea 1072681HALSGHaloredivivus sp. (strain G17) 889948NANS0Nanosalina sp. (strain J07AB43) 889962NANSJNanosalinarum sp. (strain J07AB56) 183963 Halobacteria 2235 Halobacteriales 1963268 Haloarculaceae 2237 Haloarcula 634497HALHTHaloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755) 272569HALMAHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)Halobacterium marismortui 485914HALMDHalomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) 519442HALUDHalorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) 63743 Natronomonas 268739NATM8Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) 348780NATPDNatronomonas pharaonis (strain ATCC 35678 / DSM 2160 / CIP 103997 / NBRC 14720 / NCIMB 2260 / Gabara)Halobacterium pharaonis 2236 Halobacteriaceae 795797HALJBHalalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) 2242 Halobacterium salinarum 478009HALS3Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) 64091HALSAHalobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)Halobacterium halobium 1644055 Haloferacales 1644056 Haloferacaceae 2251 Haloferax 523841HALMTHaloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)Halobacterium mediterranei 309800HALVDHaloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) 469382HALBPHalogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) 293091 Haloquadratum walsbyi 362976HALWDHaloquadratum walsbyi (strain DSM 16790 / HBSQ001) 768065HALWCHaloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) 416348HALLTHalorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) 1644061 Natrialbaceae 797210HALXSHalopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) 543526HALTVHaloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) 797302HALRXHalovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) 63742 Natrialba 29540NATA1Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) 547559NATMMNatrialba magadii (strain ATCC 43099 / DSM 3394 / CIP 104546 / JCM 8861/ NBRC 102185 / NCIMB 2190 / MS3) 88723 Natrinema 797303NATP1Natrinema pellirubrum (strain DSM 15624 / CIP 106293 / JCM 10476 / NCIMB 786 / 157) 406552NATSJNatrinema sp. (strain J7-2) 797304NATGSNatronobacterium gregoryi (strain ATCC 43098 / DSM 3393 / CCM 3738 / CIP 104747 / JCM 8860 / NBRC 102187 / NCIMB 2189 / SP2) 2158 Methanobacteriales 2159 Methanobacteriaceae 2160 Methanobacterium 877455METLAMethanobacterium lacus (strain AL-21) 868131METPWMethanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1) 2172 Methanobrevibacter 634498METRMMethanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / OCM 146 / M1) 420247METS3Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS) 339860METSTMethanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) 145260 Methanothermobacter 79929METTMMethanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) 187420METTHMethanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) 523846METFVMethanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) 2182 Methanococcales 196117 Methanocaldococcaceae 196118 Methanocaldococcus 573064METFAMethanocaldococcus fervens (strain DSM 4213 / JCM 15782 / AG86) 573063METIMMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) 243232METJAMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) 644281METSFMethanocaldococcus sp. (strain FS406-22) 579137METVMMethanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) 880724METIKMethanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) 2183 Methanococcaceae 2184 Methanococcus 419665META3Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3) 39152 Methanococcus maripaludis 1053692METMIMethanococcus maripaludis (disambiguate METMI) 402880METM5Methanococcus maripaludis (strain C5 / ATCC BAA-1333) 444158METM6Methanococcus maripaludis (strain C6 / ATCC BAA-1332) 426368METM7Methanococcus maripaludis (strain C7 / ATCC BAA-1331) 267377METMPMethanococcus maripaludis (strain S2 / LL) 406327METVSMethanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB) 456320METV3Methanococcus voltae (strain ATCC BAA-1334 / A3) 647113METOIMethanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) 224756 Methanomicrobia 570266 Methanocella 351160METARMethanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50) 1041930METCZMethanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) 304371METPSMethanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) 2191 Methanomicrobiales 410358METLZMethanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) 2194 Methanomicrobiaceae 45989 Methanoculleus 1201294METBMMethanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2)Methanogenium bourgense 368407METMJMethanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) 679926METP4Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847) 1198451 Methanoregulaceae 395331 Methanoregula 456442METB6Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8) 593750METFSMethanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) 521011METPEMethanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) 323259METHJMethanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) 94695 Methanosarcinales 2206 Methanosarcinaceae 259564METBUMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) 644295METEZMethanohalobium evestigatum (strain ATCC BAA-1072 / DSM 3721 / NBRC 107634 / OCM 161 / Z-7303) 547558METMSMethanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) 867904METHDMethanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) 679901METZDMethanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) 2207 Methanosarcina 188937METACMethanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) 269797METBFMethanosarcina barkeri (strain Fusaro / DSM 804) 192952METMAMethanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) 2222 Methanothrix 1110509METH6Methanosaeta harundinacea (strain 6Ac) 990316METSGMethanothrix soehngenii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) 349307METTPMethanothrix thermoacetophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) 190192METKAMethanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) 2259 Thermococcaceae 2260 Pyrococcus 272844PYRABPyrococcus abyssi (strain GE5 / Orsay) 186497PYRFUPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) 70601PYRHOPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) 342949PYRSNPyrococcus sp. (strain NA2) 529709PYRYCPyrococcus yayanosii (strain CH1 / JCM 16557) 2263 Thermococcus 391623THEBMThermococcus barophilus (strain DSM 11836 / MP) 593117THEGJThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) 69014THEKOThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)Pyrococcus kodakaraensis (strain KOD1) 523849THELNThermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C) 523850THEONThermococcus onnurineus (strain NA1) 604354THESMThermococcus sibiricus (strain DSM 12597 / MM 739) 1042877THES4Thermococcus sp. (strain CGMCC 1.5172 / 4557) 183967 Thermoplasmata 1235850 Methanomassiliicoccales 1236689METAXMethanomethylophilus alvus (strain Mx1201) 1295009METIIMethanomassiliicoccus intestinalis (strain Issoire-Mx1) 2301 Thermoplasmatales 263820PICTOPicrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) 2302 Thermoplasma 273075THEACThermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) 273116THEVOThermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) 1054217THEXXThermoplasmatales archaeon (strain BRNA1) 1890940 Nanoarchaeales 228908NANEQNanoarchaeum equitans (strain Kin4-M) 1294122NANSTNanobsidianus stetteri 651137 Thaumarchaeota 414004CENSYCenarchaeum symbiosum (strain A) 436308NITMSNitrosopumilus maritimus (strain SCM1) 1237085NITGGNitrososphaera gargensis (strain Ga9.2) 93506 unclassified Archaea (miscellaneous) 1579370ARCG5Archaeon GW2011_AR10 1579373ARCG3Archaeon GW2011_AR15 1579378ARCG6Archaeon GW2011_AR20 1579367ARCGXArchaeon GW2011_AR5 2 Bacteria 57723 Acidobacteria 204432 Acidobacteriia 204434 Acidobacteriaceae 240015ACIC5Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161) 204669KORVEKoribacter versatilis (strain Ellin345) 940557 Granulicella 682795GRAMMGranulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) 1198114GRATMGranulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9) 392733 Terriglobus 926566TERRKTerriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) 401053TERSSTerriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) 234267SOLUESolibacter usitatus (strain Ellin6076) 981222CHLTFChloracidobacterium thermophilum (strain B) 201174 Actinobacteria 525909ACIFDAcidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) 351607ACIC1Acidothermus cellulolyticus (strain ATCC 43068 / 11B) 469371THEBDThermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) 2049 Actinomycetaceae 644284ARCHDArcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) 548479MOBCVMobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125)Falcivibrio vaginalis 31953 Bifidobacteriaceae 1678 Bifidobacterium 367928BIFAABifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) 28025 Bifidobacterium animalis 703613BIFARBifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8) 302911 Bifidobacterium animalis subsp. lactis 442563BIFA0Bifidobacterium animalis subsp. lactis (strain AD011) 552531BIFABBifidobacterium animalis subsp. lactis (strain BB-12) 580050BIFLBBifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219) 555970BIFASBifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) 573236BIFAVBifidobacterium animalis subsp. lactis (strain V9) 1147128BIFAPBifidobacterium asteroides (strain PRL2011) 1681 Bifidobacterium bifidum 702459BIFBPBifidobacterium bifidum (strain PRL2010) 883062BIFBSBifidobacterium bifidum (strain S17) 866777BIFBABifidobacterium breve (strain ACS-071-V-Sch8b) 401473BIFDBBifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) 216816 Bifidobacterium longum 205913BIFLDBifidobacterium longum (strain DJO10A) 206672BIFLOBifidobacterium longum (strain NCC 2705) 1682 Bifidobacterium longum subsp. infantis 565040BIFL1Bifidobacterium longum subsp. infantis (strain 157F) 391904BIFLSBifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) 1679 Bifidobacterium longum subsp. longum 565042BIFL2Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) 890402BIFLMBifidobacterium longum subsp. longum (strain BBMN68) 759350BIFLJBifidobacterium longum subsp. longum (strain JDM301) 2702 Gardnerella vaginalis 553190GARV4Gardnerella vaginalis (strain 409-05) 525284GARV3Gardnerella vaginalis (strain ATCC 14019 / 317) 1009464GARVHGardnerella vaginalis (strain HMP9231) 479433CATADCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) 84998 Coriobacteriia 84999 Coriobacteriales 1643824 Atopobiaceae 521095ATOPDAtopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) 633147OLSUVOlsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / NCIMB 702895 / VPI D76D-27C)Lactobacillus uli 700015CORGPCoriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) 1643826 Eggerthellaceae 469378CRYCDCryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) 84111 Eggerthella 479437EGGLEEggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255)Eubacterium lentum 502558EEGSYEggerthella sp. (strain YY7918) 471855SLAHDSlackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) 85007 Corynebacteriales 1716 Corynebacterium 548476CORA7Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) 1717 Corynebacterium diphtheriae 698966CORD2Corynebacterium diphtheriae (strain 241) 698962CORD3Corynebacterium diphtheriae (strain 31A) 698963CORD7Corynebacterium diphtheriae (strain ATCC 27012 / C7 (beta)) 257309CORDICorynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) 698965CORDDCorynebacterium diphtheriae (strain CDCE 8392) 698967CORDHCorynebacterium diphtheriae (strain HC01) 698968CORDJCorynebacterium diphtheriae (strain HC02) 698969CORDKCorynebacterium diphtheriae (strain HC03) 698970CORDLCorynebacterium diphtheriae (strain HC04) 698964CORDWCorynebacterium diphtheriae (strain PW8) 698971CORDVCorynebacterium diphtheriae (strain VA01) 196164COREFCorynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) 1718 Corynebacterium glutamicum 196627 Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) 196627CORGLCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (disambiguate CORGL) 1204414CORGKCorynebacterium glutamicum (strain ATCC 13032 / K051) 340322CORGBCorynebacterium glutamicum (strain R) 306537CORJKCorynebacterium jeikeium (strain K411) 645127CORK4Corynebacterium kroppenstedtii (strain DSM 44385 / JCM 11950 / CIP 105744 / CCUG 35717) 525263CORLDCorynebacterium lipophiloflavum (strain DSM 44291 / CCUG 37336) 1719 Corynebacterium pseudotuberculosis 679896CORP1Corynebacterium pseudotuberculosis (strain 1002) 681645CORP2Corynebacterium pseudotuberculosis (strain C231) 765874CORPFCorynebacterium pseudotuberculosis (strain FRC41) 889513CORP9Corynebacterium pseudotuberculosis (strain I19) 662755CORRGCorynebacterium resistens (strain DSM 45100 / JCM 12819 / GTC 2026) 945712CORUBCorynebacterium ulcerans (strain BR-AD22) 504474CORU7Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) 858619CORVDCorynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131)Corynebacterium mooreparkense 2053 Gordonia 526226GORB4Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) 1112204GORPVGordonia polyisoprenivorans (strain DSM 44266 / VH2) 1762 Mycobacteriaceae 443218HOYSDHoyosella subflava (strain DSM 45089 / JCM 17490 / NBRC 109087 / DQS3-9A1) 1763 Mycobacterium 1790MYCASMycobacterium asiaticum 120793 Mycobacterium avium complex (MAC) 1764 Mycobacterium avium 243243MYCA1Mycobacterium avium (strain 104) 262316MYCPAMycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) 487521MYCIAMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600) 1778MYCGOMycobacterium gordonae 1768MYCKAMycobacterium kansasii 1769 Mycobacterium leprae 561304MYCLBMycobacterium leprae (strain Br4923) 272631MYCLEMycobacterium leprae (strain TN) 216594MYCMMMycobacterium marinum (strain ATCC BAA-535 / M) 29313MYCSHMycobacterium shimoidei 164757MYCSJMycobacterium sp. (strain JLS) 189918MYCSKMycobacterium sp. (strain KMS) 164756MYCSSMycobacterium sp. (strain MCS) 77643 Mycobacterium tuberculosis complex 1048245MYCCPMycobacterium canettii (strain CIPT 140010059) 1773 Mycobacterium tuberculosis 1765 Mycobacterium bovis 233413MYCBOMycobacterium bovis (strain ATCC BAA-935 / AF2122/97) 33892 Mycobacterium tuberculosis variant bovis BCG 410289MYCBPMycobacterium bovis (strain BCG / Pasteur 1173P2) 561275MYCBTMycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) 419947MYCTAMycobacterium tuberculosis (strain ATCC 25177 / H37Ra) 83332MYCTUMycobacterium tuberculosis (strain ATCC 25618 / H37Rv) 443149MYCTCMycobacterium tuberculosis (strain CCDC5079) 443150MYCTDMycobacterium tuberculosis (strain CCDC5180) 336982MYCTFMycobacterium tuberculosis (strain F11) 478434MYCTKMycobacterium tuberculosis (strain KZN 1435 / MDR) 572418MYCA0Mycobacterium africanum (strain GM041182) 362242MYCUAMycobacterium ulcerans (strain Agy99) 670516 Mycobacteroides 561007MYCA9Mycobacteroides abscessus (strain ATCC 19977 / DSM 44196 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543) 1774MYCCHMycobacteroides chelonae 875328MYCSDMycolicibacter sinensis (strain JDM601) 1866885 Mycolicibacterium 710421MYCCNMycobacterium chubuense (strain NBB4) 1804 Mycolicibacterium gilvum 278137MYCSRMycolicibacterium gilvum (strain DSM 45189 / LMG 24558 / Spyr1) 350054MYCGIMycolicibacterium gilvum (strain PYR-GCK) 1122247MYCHDMycolicibacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849) 710685MYCRNMycolicibacterium rhodesiae (strain NBB3) 246196MYCS2Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) 1078020MYCT3Mycolicibacterium thermoresistibile (strain ATCC 19527 / DSM 44167 / CIP 105390 / JCM 6362 / NCTC 10409 / 316) 350058MYCVPMycolicibacterium vanbaalenii (strain DSM 7251 / JCM 13017 / NRRL B-24157 / PYR-1) 85025 Nocardiaceae 1817 Nocardia 1127134NOCCGNocardia cyriacigeorgica (strain GUH-2) 247156NOCFANocardia farcinica (strain IFM 10152) 1827 Rhodococcus 234621RHOE4Rhodococcus erythropolis (strain PR4 / NBRC 100887) 685727RHOH1Rhodococcus hoagii (strain 103S) 101510RHOJRRhodococcus jostii (strain RHA1) 632772RHOOBRhodococcus opacus (strain B4) 640132SEGRDSegniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) 521096TSUPDTsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040)Corynebacterium paurometabolum 1854 Frankia 326424FRAAAFrankia alni (strain ACN14a) 106370FRACCFrankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3) 298654FRAIEFrankia inefficax (strain DSM 45817 / CECT 9037 / EuI1c) 298653FRASNFrankia sp. (strain EAN1pec) 656024FRADGFrankia symbiont subsp. Datisca glomerata 85030 Geodermatophilaceae 1146883BLASDBlastococcus saxobsidens (strain DD2) 526225GEOOGGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) 1144889MODMBModestobacter marinus (strain BC501) 446470STANLStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) 266940KINRDKineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) 85006 Micrococcales 471853BEUC1Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) 1703BRELNBrevibacterium linens 1707 Cellulomonas 590998CELFACellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) 446466CELFNCellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) 593907CELGACellulomonas gilvus (strain ATCC 13127 / NRRL B-14078) 446465BRAFDBrachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) 478801KYTSDKytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) 710696INTC7Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) 471856JONDDJonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) 85023 Microbacteriaceae 28447 Clavibacter michiganensis 443906CLAM3Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) 31964CLAMSClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) 281090LEIXXLeifsonia xyli subsp. xyli (strain CTCB07) 979556MICTSMicrobacterium testaceum (strain StLB037) 1268 Micrococcaceae 290399ARTS2Arthrobacter sp. (strain FB24) 861360GLUARGlutamicibacter arilaitensis (strain DSM 16368 / CIP 108037 / IAM 15318 / JCM 13566 / Re117) 378753KOCRDKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) 465515MICLCMicrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230)Micrococcus lysodeikticus 290340PAEATPaenarthrobacter aurescens (strain TC1) 1742993 Pseudarthrobacter 452863PSECPPseudarthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6) 930171PSEPMPseudarthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) 288705RENSMRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) 32207 Rothia 762948ROTDCRothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA) 680646ROTMDRothia mucilaginosa (strain DY-18) 85017 Promicromonosporaceae 743718ISOV2Isoptericola variabilis (strain 225) 446471XYLCXXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) 446469SANKSSanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) 2039 Tropheryma whipplei 218496TROW8Tropheryma whipplei (strain TW08/27)Whipple's bacillus 203267TROWTTropheryma whipplei (strain Twist) 28056 Micromonosporaceae 1865 Actinoplanes 512565ACTM4Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) 134676ACTS5Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) 1869ACTUTActinoplanes utahensis 1873 Micromonospora 644283MICAIMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / BCRC 12538 / CBS 129.76 / JCM 10878 / NBRC 16125 / NRRL B-16091 / INA 9442) 648999MICSLMicromonospora sp. (strain L5) 168694 Salinispora 391037SALAISalinispora arenicola (strain CNS-205) 369723SALTOSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) 263358VERMAVerrucosispora maris (strain AB-18-032) 479431NAKMYNakamurella multipartita (strain ATCC 700099 / DSM 44233 / CIP 104796 / JCM 9543 / NBRC 105858 / Y-104) 85009 Propionibacteriales 85015 Nocardioidaceae 479435KRIFDKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) 196162NOCSJNocardioides sp. (strain ATCC BAA-499 / JS614) 2045NOCSINocardioides simplexArthrobacter simplex 31957 Propionibacteriaceae 1171373ACIA4Acidipropionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) 1747 Cutibacterium acnes 267747CUTAKCutibacterium acnes (strain DSM 16379 / KPA171202) 553199CUTASCutibacterium acnes (strain SK137) 1032480MICPNMicrolunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) 754252PROFCPropionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / DSM 4902 / CIP 103027 / NCIMB 8099 / CIRM-BIA1) 767029PSEPQPseudopropionibacterium propionicum (strain F0230a) 2070 Pseudonocardiaceae 446462ACTMDActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) 33910 Amycolatopsis mediterranei 713604AMYMSAmycolatopsis mediterranei (strain S699)Nocardia mediterranei 749927AMYMUAmycolatopsis mediterranei (strain U-32) 68170LENAELentzea aerocolonigenesNocardia aerocolonigenesSaccharothrix aerocolonigenes 675635PSEUXPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) 471857SACVDSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) 405948SACENSaccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) 1179773SACESSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) 266117RUBXDRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) 2062 Streptomycetaceae 2063 Kitasatospora 1894KITAUKitasatospora aureofaciensStreptomyces aureofaciens 2064KITGRKitasatospora griseolaStreptomyces griseolosporeus 452652KITSKKitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)Streptomyces setae 1883 Streptomyces 68570STRA9Streptomyces albulus 278992STRA7Streptomyces ambofaciens (strain ATCC 23877 / 3486 / DSM 40053 / JCM 4204 / NBRC 12836 / NRRL B-2516) 227882STRAWStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) 749414STRBBStreptomyces bingchenggensis (strain BCW-1) 1003195STRENStreptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) 443255STRC2Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) 100226STRCOStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) 1214242STRC3Streptomyces collinus (strain DSM 40733 / Tu 365) 1214101STRDJStreptomyces davaonensis (strain DSM 101723 / JCM 4913 / KCC S-0913 / 768) 1906STRFRStreptomyces fradiaeStreptomyces roseoflavus 455632STRGGStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) 1133850STRHJStreptomyces hygroscopicus subsp. jinggangensis (strain 5008) 591167STRFAStreptomyces pratensis (strain ATCC 33331 / IAF-45CD) 457429STRE2Streptomyces pristinaespiralis (strain ATCC 25486 / DSM 40338 / CBS 914.69 / JCM 4507 / NBRC 13074 / NRRL 2958 / 5647) 1265868STRR1Streptomyces rimosus subsp. rimosus (strain ATCC 10970 / DSM 40260 / JCM 4667 / NRRL 2234) 359131STRR3Streptomyces rubellomurinus (strain ATCC 31215) 680198STRSWStreptomyces scabiei (strain 87.22) 465543STRSHStreptomyces sp. (strain SPB074) 862751STREKStreptomyces sp. (strain SirexAA-E / ActE) 55952STRTOStreptomyces toyocaensis 1114943STRT9Streptomyces tsukubensis (strain DSM 42081 / NBRC 108919 / NRRL 18488 / 9993) 953739STRVPStreptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) 566461STRV1Streptomyces viridosporus (strain ATCC 14672 / DSM 40746 / JCM 4963 / KCTC 9882 / NRRL B-12104 / FH 1290)Streptomyces ghanaensis 85012 Streptosporangiales 83676 Nocardiopsaceae 2013 Nocardiopsis 1205910NOCAANocardiopsis alba (strain ATCC BAA-2165 / BE74) 446468NOCDDNocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / CIP 107115 / JCM 7437 / KCTC 9190 / NBRC 14626 / NCTC 10488 / NRRL B-5397 / IMRU 509) 269800THEFYThermobifida fusca (strain YX) 479432STRRDStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) 471852THECDThermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NBRC 15933 / NCIMB 10081 / Henssen B9) 469383CONWIConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) 187857 Aquificae 32069 Aquificales 64898 Aquificaceae 224324AQUAEAquifex aeolicus (strain VF5) 608538HYDTTHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) 380749HYDS0Hydrogenobaculum sp. (strain Y04AAS1) 638303THEAHThermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) 1298851THET7Thermosulfidibacter takaii (strain DSM 17441 / JCM 13301 / NBRC 103674 / ABI70S6) 224027 Hydrogenothermaceae 123214PERMHPersephonella marina (strain DSM 14350 / EX-H1) 212790 Sulfurihydrogenibium 204536SULAASulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) 436114SULSYSulfurihydrogenibium sp. (strain YO3AOP1) 558314 Desulfurobacteriaceae 868864DESTDDesulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) 648996THEA1Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) 1303518CHTCTChthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49) 976 Bacteroidetes 563843 Rhodothermaceae 518766RHOM4Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10)Rhodothermus obamensis 146919 Salinibacter ruber 309807SALRDSalinibacter ruber (strain DSM 13855 / M31) 761659SALRMSalinibacter ruber (strain M8) 171549 Bacteroidales 816 Bacteroides 817 Bacteroides fragilis 862962BACF6Bacteroides fragilis (strain 638R) 272559BACFNBacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) 295405BACFRBacteroides fragilis (strain YCH46) 693979BACT6Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) 667015BACSHBacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) 46506BACSEBacteroides stercoris 226186BACTNBacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) 435590BACV8Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154) 709991ODOSDOdoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / CIP 104287 / JCM 15291 / NCTC 10825 / 1651/6) 694427PALPWPaludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) 836 Porphyromonas 879243PORADPorphyromonas asaccharolytica (strain ATCC 25260 / DSM 20707 / BCRC 10618 / JCM 6326 / LMG 13178 / VPI 4198) 36874PORCNPorphyromonas cangingivalis 553175POREAPorphyromonas endodontalis (strain ATCC 35406 / BCRC 14492 / JCM 8526 / NCTC 13058 / HG 370) 837 Porphyromonas gingivalis 431947PORG3Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) 242619PORGIPorphyromonas gingivalis (strain ATCC BAA-308 / W83) 838 Prevotella 908937PREDDPrevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772)Mitsuokella dentalis 767031PREDFPrevotella denticola (strain F0289) 246198PREI7Prevotella intermedia (strain 17) 553174PREMBPrevotella melaninogenica (strain ATCC 25845 / DSM 7089 / JCM 6325 / VPI 2381 / B282)Bacteroides melaninogenicus 264731PRER2Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) 679935ALIFIAlistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) 2005525 Tannerellaceae 435591PARD8Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) 203275TANFATannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338)Bacteroides forsythus 511995AZOPCAzobacteroides pseudotrichonymphae genomovar. CFP2 563835 Chitinophagaceae 485918CHIPDChitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) 700598NIAKGNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) 768507 Cytophagales 452471AMOA5Amoebophilus asiaticus (strain 5a2) 880071BERLSBernardetia litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) 563798 Cyclobacteriaceae 866536BELBDBelliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) 880070CYCMSCyclobacterium marinum (strain ATCC 25205 / DSM 745)Flectobacillus marinus 926556ECHVKEchinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) 89373 Cytophagaceae 269798CYTH3Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) 471854DYAFDDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) 929562EMTOGEmticicia oligotrophica (strain DSM 17448 / GPTSA100-15) 649349LEAB4Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) 761193RUNSLRunella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) 504472SPILDSpirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) 643867MARTHMarivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43)Microscilla tractuosaFlexibacter tractuosus 117743 Flavobacteriia 200644 Flavobacteriales 34098 Blattabacterium 331104BLASBBlattabacterium sp. subsp. Blattella germanica (strain Bge) 600809BLASPBlattabacterium sp. subsp. Periplaneta americana (strain BPLAN) 755732FLUTRFluviicola taffensis (strain DSM 16823 / NCIMB 13979 / RW262) 926562OWEHDOwenweeksia hongkongensis (strain DSM 17368 / CIP 108786 / JCM 12287 / NRRL B-23963 / UST20020801) 49546 Flavobacteriaceae 746697AEQSUAequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) 1016 Capnocytophaga 860228CAPCCCapnocytophaga canimorsus (strain 5) 553178CAPGICapnocytophaga gingivalis 521097CAPODCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / NCTC 12371 / VPI 2845) 104264 Cellulophaga 688270CELADCellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) 867900CELLCCellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) 216432CROAHCroceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) 983548DOKS4Dokdonia sp. (strain 4H-3-7-5)Krokinobacter diaphorus (strain 4H-3-7-5) 237 Flavobacterium 1034807FLABFFlavobacterium branchiophilum (strain FL-15) 1041826FLACAFlavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) 1086011FLAFPFlavobacterium frigoris (strain PS1) 1094466FLAIGFlavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) 376686FLAJ1Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) 402612FLAPJFlavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) 1144313FLASCFlavobacterium sp. (strain CF136) 411154GRAFKGramella forsetii (strain KT0803) 983544LACS5Lacinutrix sp. (strain 5H-3-7-4) 398720LEEBMLeeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217)Flavobacterium sp. (strain MED217) 313603MARSHMaribacter sp. (strain HTCC2170 / KCCM 42371) 886377MURRDMuricauda ruestringensis (strain DSM 13258 / CIP 107369 / LMG 19739 / B1) 592029NONDDNonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6)Donghaeana dokdonensis 867902ORNRLOrnithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / CIP 104009 / LMG 9086) 313595PSYTTPsychroflexus torquis (strain ATCC 700755 / ACAM 623) 992406RIEARRiemerella anatipestifer (strain RA-GD) 313596ROBBHRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) 865938WEEVCWeeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) 63186ZOBGAZobellia galactanivorans (strain DSM 12802 / CCUG 47099 / CIP 106680 / NCIMB 13871 / Dsij) 655815ZUNPSZunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) 531844FLAB3Flavobacteriaceae bacterium (strain 3519-10) 336810 Candidatus Sulcia muelleri 706194SULMCSulcia muelleri (strain CARI) 641892SULMDSulcia muelleri (strain DMIN) 444179SULMWSulcia muelleri (strain GWSS) 595499SULMSSulcia muelleri (strain SMDSEM) 156586FLABBFlavobacteria bacterium (strain BBFL7) 1936988 Saprospirales 760192HALH1Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) 984262SAPGLSaprospira grandis (strain Lewin) 84566 Sphingobacteriaceae 485917PEDHDPedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) 762903PSESLPseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) 929556SOLCMSolitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D)Flexibacter canadensis 743722SPHS2Sphingobacterium sp. (strain 21) 511051CALEACaldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) 459349CLOAICloacimonas acidaminovorans (strain Evry) 204429 Chlamydiia 810 Chlamydia 218497CHLABChlamydia abortus (strain DSM 27085 / S26/3) 227941CHLCVChlamydophila caviae (strain ATCC VR-813 / DSM 19441 / GPIC) 264202CHLFFChlamydia felis (strain Fe/C-56) 243161CHLMUChlamydia muridarum (strain MoPn / Nigg) 331635CHLPEChlamydia pecorum (strain ATCC VR-628 / E58) 83558 Chlamydia pneumoniae 115713CHLPNChlamydia pneumoniae (disambiguate CHLPN) 406984CHLPPChlamydophila pneumoniae (strain LPCoLN) 813 Chlamydia trachomatis 272561CHLTRChlamydia trachomatis (strain D/UW-3/Cx) 887712CHLTCChlamydia trachomatis (strain L2c) 580047CHLT4Chlamydia trachomatis serovar A (strain A2497) 315277CHLTAChlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13) 580049CHLTJChlamydia trachomatis serovar B (strain Jali20/OT) 672161CHLTZChlamydia trachomatis serovar B (strain TZ1A828/OT) 759363CHLTDChlamydia trachomatis serovar D (strain D-EC) 759364CHLTLChlamydia trachomatis serovar D (strain D-LC) 707183CHLT1Chlamydia trachomatis serovar E (strain E/11023) 707184CHLT5Chlamydia trachomatis serovar E (strain E/150) 634464CHLTSChlamydia trachomatis serovar E (strain Sweden2) 707187CHLTGChlamydia trachomatis serovar G (strain G/11074) 707186CHLT0Chlamydia trachomatis serovar G (strain G/11222) 718219CHLT9Chlamydia trachomatis serovar G (strain G/9301) 707185CHLT7Chlamydia trachomatis serovar G (strain G/9768) 471472CHLT2Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) 471473CHLTBChlamydia trachomatis serovar L2b (strain UCH-1/proctitis) 83554 Chlamydophila psittaci 331636CHLP6Chlamydophila psittaci (strain ATCC VR-125 / 6BC) 929557CHLP1Chlamydophila psittaci (strain RD1) 1963360 Parachlamydiales 92713 Parachlamydiaceae 264201PARUWProtochlamydia amoebophila (strain UWE25) 765952PARAVParachlamydia acanthamoebae (strain UV7) 331113SIMNZSimkania negevensis (strain ATCC VR-1471 / Z) 716544WADCWWaddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) 191412 Chlorobiaceae 256319 Chlorobaculum 517417CHLP8Chlorobaculum parvum (strain NCIB 8327) 194439CHLTEChlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) 1091 Chlorobium 340177CHLCHChlorobium chlorochromatii (strain CaD3) 290315CHLL2Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) 1096 Chlorobium phaeobacteroides 331678CHLPBChlorobium phaeobacteroides (strain BS1) 290317CHLPDChlorobium phaeobacteroides (strain DSM 266) 290318CHLPMChlorobium phaeovibrioides (strain DSM 265 / 1930) 517418CHLT3Chloroherpeton thalassium (strain ATCC 35110 / GB-78) 1099 Pelodictyon 319225PELLDPelodictyon luteolum (strain DSM 273 / 2530)Chlorobium luteolum (strain DSM 273) 324925PELPBPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) 290512PROA2Prosthecochloris aestuarii (strain DSM 271 / SK 413) 200795 Chloroflexi 926569ANATUAnaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) 926550CALASCaldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) 32061 Chloroflexia 32064 Chloroflexales 1107 Chloroflexus 326427CHLADChloroflexus aggregans (strain MD-66 / DSM 9485) 1108 Chloroflexus aurantiacus 480224CHLSYChloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) 324602CHLAAChloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) 120961 Roseiflexus 383372ROSCSRoseiflexus castenholzii (strain DSM 13941 / HLO8) 357808ROSS1Roseiflexus sp. (strain RS-1) 316274HERA2Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785 / 114-95) 301297 Dehalococcoidia 61435 Dehalococcoides mccartyi 216389DEHMBDehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1) 243164DEHM1Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)Dehalococcoides ethenogenes (strain 195) 255470DEHMCDehalococcoides mccartyi (strain CBDB1) 633145DEHMGDehalococcoides mccartyi (strain GT) 311424DEHMVDehalococcoides mccartyi (strain VS) 552811DEHLBDehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) 189775 Thermomicrobia 479434SPHTDSphaerobacter thermophilus (strain DSM 20745 / S 6022) 309801THERPThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) 653733DESISDesulfurispirillum indicum (strain ATCC BAA-1389 / S5) 309798COPPDCoprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) 1117 Cyanobacteria 251229CHRTPChroococcidiopsis thermalis (strain PCC 7203) 251221GLOVIGloeobacter violaceus (strain ATCC 29082 / PCC 7421) 1162 Nostocaceae 272123ANACCAnabaena cylindrica (strain ATCC 27899 / PCC 7122) 1177 Nostoc 63737NOSP7Nostoc punctiforme (strain ATCC 29133 / PCC 73102) 28072NOSS7Nostoc sp. (strain ATCC 29411 / PCC 7524) 103690NOSS1Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) 264688 Trichormus 240292TRIV2Trichormus variabilis (strain ATCC 29413 / PCC 7937) 551115NOSA0Nostoc azollae (strain 0708) 1301283 Oscillatoriophycideae 1118 Chroococcales 1890450 Aphanothecaceae 1453429ATETHAtelocyanobacterium thalassa (isolate ALOHA) 43989CROS5Crocosphaera subtropica (strain ATCC 51142 / BH68) 28070 Gloeothece 65393GLOC7Gloeothece citriformis (strain PCC 7424) 497965GLOV7Gloeothece verrucosa (strain PCC 7822) 65093HALP7Halothece sp. (strain PCC 7418)Synechococcus sp. (strain PCC 7418) 2546366 Rippkaea orientalis 41431RIPO1Rippkaea orientalis (strain PCC 8801) 395962RIPO2Rippkaea orientalis (strain PCC 8802) 102234 Cyanobacterium 755178CYAAPCyanobacterium aponinum (strain PCC 10605) 292563CYASCCyanobacterium stanieri (strain ATCC 29140 / PCC 7202) 449447MICANMicrocystis aeruginosa (strain NIES-843) 1150 Oscillatoriales 395961CYAP4Cyanothece sp. (strain PCC 7425 / ATCC 29141) 1892252 Microcoleaceae 696747ARTPNArthrospira platensis (strain NIES-39 / IAM M-135) 203124TRIEITrichodesmium erythraeum (strain IMS101) 313612LYNSPLyngbya sp. (strain PCC 8106) 111780STAC7Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) 1890424 Synechococcales 329726ACAM1Acaryochloris marina (strain MBIC 11017) 1173020CHAP6Chamaesiphon minutus (strain ATCC 27169 / PCC 6605) 1111708SYNY3Synechocystis sp. (strain PCC 6803 / Kazusa) 1219 Prochlorococcus marinus 146891PROMSProchlorococcus marinus (strain AS9601) 93059PROM4Prochlorococcus marinus (strain MIT 9211) 93060PROM2Prochlorococcus marinus (strain MIT 9215) 167546PROM0Prochlorococcus marinus (strain MIT 9301) 59922PROM3Prochlorococcus marinus (strain MIT 9303) 74546PROM9Prochlorococcus marinus (strain MIT 9312) 74547PROMMProchlorococcus marinus (strain MIT 9313) 167542PROM5Prochlorococcus marinus (strain MIT 9515) 167555PROM1Prochlorococcus marinus (strain NATL1A) 59920PROMTProchlorococcus marinus (strain NATL2A) 167539PROMAProchlorococcus marinus (strain SARG / CCMP1375 / SS120) 59919PROMPProchlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 / MED4) 1890426 Synechococcaceae 292564CYAGPCyanobium gracile (strain ATCC 27147 / PCC 6307) 1129 Synechococcus 32046 Synechococcus elongatus 1140SYNE7Synechococcus elongatus (strain PCC 7942)Anacystis nidulans R2 269084SYNP6Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)Anacystis nidulans 195253SYNP3Synechococcus sp. (strain ATCC 27167 / PCC 6312) 32049SYNP2Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) 91464SYNS7Synechococcus sp. (strain ATCC 29403 / PCC 7335) 64471SYNS3Synechococcus sp. (strain CC9311) 110662SYNSCSynechococcus sp. (strain CC9605) 316279SYNS9Synechococcus sp. (strain CC9902) 321332SYNJBSynechococcus sp. (strain JA-2-3B'a(2-13))Cyanobacteria bacterium Yellowstone B-Prime 321327SYNJASynechococcus sp. (strain JA-3-3Ab)Cyanobacteria bacterium Yellowstone A-Prime 316278SYNR3Synechococcus sp. (strain RCC307) 32051SYNPWSynechococcus sp. (strain WH7803) 84588SYNPXSynechococcus sp. (strain WH8102) 197221THEEBThermosynechococcus elongatus (strain BP-1) 191394 Deferribacteraceae 768670CALNYCalditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) 639282DEFDSDeferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) 522772DENA2Denitrovibrio acetiphilus (strain DSM 12809 / N2460) 717231FLESMFlexistipes sinusarabici (strain DSM 4947 / MAS 10) 188787 Deinococci 118964 Deinococcales 1298 Deinococcus 546414DEIDVDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) 319795DEIGDDeinococcus geothermalis (strain DSM 11300) 745776DEIGIDeinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) 709986DEIMLDeinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) 937777DEIPDDeinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) 693977DEIPMDeinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703 / MRP) 243230DEIRADeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) 649638TRURRTruepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) 188786 Thermaceae 869210MARHTMarinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) 65551 Meiothermus 504728MEIRDMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) 526227MEISDMeiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) 670487OCEP5Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) 274 Thermus thermophilus 262724THET2Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) 300852THET8Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 762633THETGThermus thermophilus (strain SG0.5JP17-16) 13 Dictyoglomus 309799DICT6Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) 515635DICTDDictyoglomus turgidum (strain Z-1310 / DSM 6724) 641853 Elusimicrobia 445932ELUMPElusimicrobium minutum (strain Pei191) 471821UNCTGUncultured termite group 1 bacterium phylotype Rs-D17 59374FIBSSFibrobacter succinogenes (strain ATCC 19169 / S85) 1239 Firmicutes 91061 Bacilli 1385 Bacillales 186823 Alicyclobacillaceae 1388 Alicyclobacillus acidocaldarius 1048834ALIATAlicyclobacillus acidocaldarius (strain Tc-4-1)Bacillus acidocaldarius 521098ALIADAlicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-1A) 562970KYRT2Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2)Bacillus tusciae 186817 Bacillaceae 698758AMPXNAmphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) 491915ANOFWAnoxybacillus flavithermus (strain DSM 21510 / WK1) 1386 Bacillus 1236973BACA3Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9157 / 1139) 692420BACASBacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393) 1392 Bacillus anthracis 261594BACANBacillus anthracis (disambiguate BACAN) 592021BACAABacillus anthracis (strain A0248) 568206BACACBacillus anthracis (strain CDC 684 / NRRL 3495) 720555BACA1Bacillus atrophaeus (strain 1942) 649639BACCJBacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) 1396 Bacillus cereus 572264BACC3Bacillus cereus (strain 03BB102) 405534BACC7Bacillus cereus (strain AH187) 405535BACC0Bacillus cereus (strain AH820) 222523BACC1Bacillus cereus (strain ATCC 10987 / NRS 248) 226900BACCRBacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) 405532BACC4Bacillus cereus (strain B4264) 405531BACC2Bacillus cereus (strain G9842) 361100BACCQBacillus cereus (strain Q1) 288681BACCZBacillus cereus (strain ZK / E33L) 637380BACAIBacillus cereus var. anthracis (strain CI) 66692BACSKBacillus clausii (strain KSM-K16) 941639BACC6Bacillus coagulans (strain 2-6) 315749BACCNBacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) 272558BACHDBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) 279010BACLDBacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) 1404 Bacillus megaterium 545693BACMQBacillus megaterium (strain ATCC 12872 / QMB1551) 592022BACMDBacillus megaterium (strain DSM 319) 315730BACMKBacillus mycoides (strain KBAB4) 398511BACPEBacillus pseudofirmus (strain OF4) 315750BACP2Bacillus pumilus (strain SAFR-032) 1423 Bacillus subtilis 936156BACSTBacillus subtilis (strain BSn5) 96241 Bacillus subtilis subsp. spizizenii 655816BACPZBacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) 1052585BACPTBacillus subtilis subsp. spizizenii (strain TU-B-10) 224308BACSUBacillus subtilis (strain 168) 1428 Bacillus thuringiensis 412694BACAHBacillus thuringiensis (strain Al Hakam) 930170BACT0Bacillus thuringiensis subsp. finitimus (strain YBT-020) 281309BACHKBacillus thuringiensis subsp. konkukian (strain 97-27) 714359BACT1Bacillus thuringiensis (strain BMB171) 326423BACVZBacillus velezensis (strain DSM 23117 / BGSC 10A6 / FZB42) 129337 Geobacillus 235909GEOKAGeobacillus kaustophilus (strain HTA426) 471223GEOSWGeobacillus sp. (strain WCH70) 581103GEOS0Geobacillus sp. (strain Y4.1MC1) 544556GEOSYGeobacillus sp. (strain Y412MC61) 420246GEOTNGeobacillus thermodenitrificans (strain NG80-2) 444177LYSSCLysinibacillus sphaericus (strain C3-41) 221109OCEIHOceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831) 634956PARTCParageobacillus thermoglucosidasius (strain C56-YS93) 33986 Exiguobacterium 1087448EXIABExiguobacterium antarcticum (strain B7) 262543EXIS2Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) 360911EXISAExiguobacterium sp. (strain ATCC BAA-1283 / AT1b) 1637 Listeria 272626LISINListeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) 881621LISIPListeria ivanovii (strain ATCC BAA-678 / PAM 55) 1639 Listeria monocytogenes 637381LISM2Listeria monocytogenes serotype 1/2a (strain 08-5923) 393133LISM4Listeria monocytogenes serotype 1/2a (strain 10403S) 552536LISMHListeria monocytogenes serotype 4a (strain HCC23) 563174LISMLListeria monocytogenes serotype 4a (strain L99) 1030009LISMMListeria monocytogenes serotype 4a (strain M7) 2065118 Listeria monocytogenes serotype 4b 568819LISMCListeria monocytogenes serotype 4b (strain CLIP80459) 265669LISMFListeria monocytogenes serotype 4b (strain F2365) 169963LISMOListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) 683837LISSSListeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954) 386043LISW6Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) 186822 Paenibacillaceae 358681BREBNBrevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) 44249 Paenibacillus 481743GEOS4Geobacillus sp. (strain Y412MC10) 1036673PAEMKPaenibacillus mucilaginosus (strain KNP414) 1406 Paenibacillus polymyxa 349520PAEP6Paenibacillus polymyxa (strain E681) 886882PAEPSPaenibacillus polymyxa (strain SC2) 324057PAESJPaenibacillus sp. (strain JDR-2) 985665PAETHPaenibacillus terrae (strain HPL-003) 717605THECKThermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) 1002809SOLSSSolibacillus silvestris (strain StLB046)Bacillus silvestris 439292BACIEBacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) 90964 Staphylococcaceae 458233MACCJMacrococcus caseolyticus (strain JCSC5402) 1279 Staphylococcus 1280 Staphylococcus aureus 703339STAA4Staphylococcus aureus (strain 04-02981) 273036STAABStaphylococcus aureus (strain bovine RF122 / ET3-1) 46170 Staphylococcus aureus subsp. aureus 93062STAACStaphylococcus aureus (strain COL) 889933STAAGStaphylococcus aureus (strain ECT-R 2) 681288STAADStaphylococcus aureus (strain ED98) 359787STAA2Staphylococcus aureus (strain JH1) 359786STAA9Staphylococcus aureus (strain JH9) 546342STAAKStaphylococcus aureus (strain JKD6008) 869816STAAJStaphylococcus aureus (strain JKD6159) 523796STAA5Staphylococcus aureus (strain MRSA ST398 / isolate S0385) 282458STAARStaphylococcus aureus (strain MRSA252) 282459STAASStaphylococcus aureus (strain MSSA476) 196620STAAWStaphylococcus aureus (strain MW2) 418127STAA1Staphylococcus aureus (strain Mu3 / ATCC 700698) 158878STAAMStaphylococcus aureus (strain Mu50 / ATCC 700699) 158879STAANStaphylococcus aureus (strain N315) 93061STAA8Staphylococcus aureus (strain NCTC 8325) 426430STAAEStaphylococcus aureus (strain Newman) 548473STAAHStaphylococcus aureus (strain TCH60) 663951STAA0Staphylococcus aureus (strain TW20 / 0582) 367830 Staphylococcus aureus (strain USA300) 367830STAA3Staphylococcus aureus (strain USA300) (disambiguate STAA3) 451516STAATStaphylococcus aureus (strain USA300 / TCH1516) 685039STAAFStaphylococcus aureus subsp. aureus (strain ED133) 396513STACTStaphylococcus carnosus (strain TM300) 1282 Staphylococcus epidermidis 176280STAESStaphylococcus epidermidis (strain ATCC 12228) 176279STAEQStaphylococcus epidermidis (strain ATCC 35984 / RP62A) 279808STAHJStaphylococcus haemolyticus (strain JCSC1435) 1284STAHYStaphylococcus hyicus 698737STALHStaphylococcus lugdunensis (strain HKU09-01) 283734 Staphylococcus pseudintermedius 984892STAPEStaphylococcus pseudintermedius (strain ED99) 937773STAPHStaphylococcus pseudintermedius (strain HKU10-03) 342451STAS1Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) 186826 Lactobacillales 866775AERUAAerococcus urinae (strain ACS-120-V-Col10a) 208596CARS1Carnobacterium sp. (strain 17-4) 81852 Enterococcaceae 1350 Enterococcus 1351 Enterococcus faecalis 936153ENTF6Enterococcus faecalis (strain 62) 474186ENTFOEnterococcus faecalis (strain ATCC 47077 / OG1RF) 226185ENTFAEnterococcus faecalis (strain ATCC 700802 / V583) 1155766ENTFUEnterococcus faecium (strain Aus0004) 33970 Melissococcus plutonius 940190MELPTMelissococcus plutonius (strain ATCC 35311 / CIP 104052 / LMG 20360 / NCIMB 702443) 1090974MELPDMelissococcus plutonius (strain DAT561) 945021TETHNTetragenococcus halophilus (strain DSM 20338 / JCM 20259 / NCIMB 9735 / NBRC 12172)Pediococcus halophilus 33958 Lactobacillaceae 1578 Lactobacillus 1579 Lactobacillus acidophilus 891391LACA3Lactobacillus acidophilus (strain 30SC) 272621LACACLactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) 1604 Lactobacillus amylovorus 695560LACARLactobacillus amylovorus (strain GRL 1112) 695562LACALLactobacillus amylovorus (strain GRL 1118) 387344LACBALactobacillus brevis (strain ATCC 367 / JCM 1170) 511437LACBNLactobacillus buchneri (strain NRRL B-30929) 1582 Lactobacillus casei 998820LACCDLactobacillus casei (strain BD-II) 543734LACCBLactobacillus casei (strain BL23) 999378LACCCLactobacillus casei (strain LC2W) 498216LACCZLactobacillus casei (strain Zhang) 748671LACCSLactobacillus crispatus (strain ST1) 1585 Lactobacillus delbrueckii subsp. bulgaricus 353496LACD2Lactobacillus delbrueckii subsp. bulgaricus (strain 2038) 390333LACDALactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / JCM 1002 / NBRC 13953 / NCIMB 11778) 321956LACDBLactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) 767455LACDNLactobacillus delbrueckii subsp. bulgaricus (strain ND02) 1613 Lactobacillus fermentum 712938LACFCLactobacillus fermentum (strain CECT 5716) 334390LACF3Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) 324831LACGALactobacillus gasseri (strain ATCC 33323 / DSM 20243 / JCM 1131 / NCIMB 11718 / AM63) 405566LACH4Lactobacillus helveticus (strain DPC 4571) 33959 Lactobacillus johnsonii 257314LACJOLactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) 633699LACJFLactobacillus johnsonii (strain FI9785) 1033837LACKZLactobacillus kefiranofaciens (strain ZW3) 321967LACP3Lactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 / KCTC 3260 / NRRL B-441) 1590 Lactobacillus plantarum 220668LACPLLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) 644042LACPJLactobacillus plantarum (strain JDM1) 889932LACPSLactobacillus plantarum (strain ST-III) 1598 Lactobacillus reuteri 491077LACRSLactobacillus reuteri (strain ATCC 55730 / SD2112) 557436LACRDLactobacillus reuteri (strain DSM 20016) 557433LACRJLactobacillus reuteri (strain JCM 1112) 47715 Lactobacillus rhamnosus 568703LACRGLactobacillus rhamnosus (strain ATCC 53103 / GG) 568704LACRLLactobacillus rhamnosus (strain Lc 705) 1069534LACRRLactobacillus ruminis (strain ATCC 27782 / RF3) 314315LACSSLactobacillus sakei subsp. sakei (strain 23K) 1624 Lactobacillus salivarius 712961LACSCLactobacillus salivarius (strain CECT 5713) 362948LACS1Lactobacillus salivarius (strain UCC118) 714313LACSMLactobacillus sanfranciscensis (strain TMW 1.1304) 1253 Pediococcus 701521PEDCPPediococcus claussenii (strain ATCC BAA-344 / DSM 14800 / JCM 18046 / KCTC 3811 / P06) 278197PEDPAPediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w) 81850 Leuconostocaceae 1243 Leuconostoc 1229758LEUCJLeuconostoc carnosum (strain JB16) 349519LEUCKLeuconostoc citreum (strain KM20) 1244 Leuconostoc gelidum 1229756LEUGJLeuconostoc gelidum (strain JB7) 762550LEUGGLeuconostoc gelidum subsp. gasicomitatum (strain DSM 15947 / CECT 5767 / JCM 12535 / LMG 18811 / TB1-10) 203120LEUMMLeuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) 979982LEUS2Leuconostoc sp. (strain C2) 203123OENOBOenococcus oeni (strain ATCC BAA-331 / PSU-1) 46255 Weissella 1045854WEIKKWeissella koreensis (strain KACC 15510) 1629WEIVIWeissella viridescensLactobacillus viridescens 1300 Streptococcaceae 1357 Lactococcus 1363 Lactococcus garvieae 420889LACGTLactococcus garvieae (strain ATCC 49156 / DSM 6783 / NCIMB 13208 / YT-3)Enterococcus seriolicida 420890LACGLLactococcus garvieae (strain Lg2)Enterococcus seriolicida 1358 Lactococcus lactis 1359 Lactococcus lactis subsp. cremoris 416870LACLMLactococcus lactis subsp. cremoris (strain MG1363) 746361LACLNLactococcus lactis subsp. cremoris (strain NZ9000) 272622LACLSLactococcus lactis subsp. cremoris (strain SK11) 1360 Lactococcus lactis subsp. lactis 929102LACLVLactococcus lactis subsp. lactis (strain CV56) 272623LACLALactococcus lactis subsp. lactis (strain IL1403) 684738LACLKLactococcus lactis subsp. lactis (strain KF147) 1301 Streptococcus 1311 Streptococcus agalactiae 211110STRA3Streptococcus agalactiae serotype III (strain NEM316) 205921STRA1Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700) 208435STRA5Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) 1203670STRA2Streptococcus agalactiae serotype Ia (strain GD201008-001) 119602 Streptococcus dysgalactiae subsp. equisimilis 663954STREDStreptococcus dysgalactiae subsp. equisimilis (strain ATCC 12394 / D166B) 486410STRDGStreptococcus dysgalactiae subsp. equisimilis (strain GGS_124) 1336 Streptococcus equi 553482STRE4Streptococcus equi subsp. equi (strain 4047) 40041 Streptococcus equi subsp. zooepidemicus 1051072STRECStreptococcus equi subsp. zooepidemicus (strain ATCC 35246 / C74-63) 553483STRS7Streptococcus equi subsp. zooepidemicus (strain H70) 552526STREMStreptococcus equi subsp. zooepidemicus (strain MGCS10565) 53354 Streptococcus gallolyticus 981539STRG1Streptococcus gallolyticus (strain ATCC 43143 / F-1867) 990317STRG2Streptococcus gallolyticus (strain ATCC BAA-2069) 637909STRG3Streptococcus gallolyticus (strain UCN34) 467705STRGCStreptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288) 1069533STRICStreptococcus infantarius (strain CJ18) 591365STRIJStreptococcus intermedius (strain JTH08) 1116231STRMDStreptococcus macedonicus (strain ACA-DC 198) 365659STRM6Streptococcus mitis (strain B6) 1309 Streptococcus mutans 210007STRMUStreptococcus mutans serotype c (strain ATCC 700610 / UA159) 511691STRMNStreptococcus mutans serotype c (strain NN2025) 927666STROUStreptococcus oralis (strain Uo5) 936154STRPWStreptococcus parauberis (strain KCTC 11537) 981540STRPXStreptococcus pasteurianus (strain ATCC 43144 / JCM 5346 / CDC 1723-81) 1313 Streptococcus pneumoniae 189423STRZ6Streptococcus pneumoniae (strain 670-6B) 488221STRP7Streptococcus pneumoniae (strain 70585) 561276STRPJStreptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) 171101STRR6Streptococcus pneumoniae (strain ATCC BAA-255 / R6) 516950STRPSStreptococcus pneumoniae (strain CGSP14) 487214STRPIStreptococcus pneumoniae (strain Hungary19A-6) 488222STRZJStreptococcus pneumoniae (strain JJA) 488223STRZPStreptococcus pneumoniae (strain P1031) 1130804STRETStreptococcus pneumoniae (strain ST556) 487213STRZTStreptococcus pneumoniae (strain Taiwan19F-14) 869269STRZIStreptococcus pneumoniae serotype 1 (strain INV104) 869216STRZNStreptococcus pneumoniae serotype 14 (strain INV200) 512566STRP4Streptococcus pneumoniae serotype 19F (strain G54) 373153STRP2Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) 869215STRZOStreptococcus pneumoniae serotype 3 (strain OXC141) 170187STRPNStreptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) 525381STRP0Streptococcus pneumoniae serotype A19 (strain TCH8431) 1054460STRESStreptococcus pseudopneumoniae (strain IS7493) 1314 Streptococcus pyogenes 160490STRP1Streptococcus pyogenes serotype M1 342023 Streptococcus pyogenes serotype M12 370553STRPBStreptococcus pyogenes serotype M12 (strain MGAS2096) 370551STRPCStreptococcus pyogenes serotype M12 (strain MGAS9429) 186103STRP8Streptococcus pyogenes serotype M18 (strain MGAS8232) 370552STRPDStreptococcus pyogenes serotype M2 (strain MGAS10270) 319701STRPMStreptococcus pyogenes serotype M28 (strain MGAS6180) 301448 Streptococcus pyogenes serotype M3 198466STRP3Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) 193567STRPQStreptococcus pyogenes serotype M3 (strain SSI-1) 370554STRPFStreptococcus pyogenes serotype M4 (strain MGAS10750) 471876STRPZStreptococcus pyogenes serotype M49 (strain NZ131) 160491STRPGStreptococcus pyogenes serotype M5 (strain Manfredo) 286636STRP6Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) 1304 Streptococcus salivarius 1046629STRE5Streptococcus salivarius (strain 57.I) 1048332STREHStreptococcus salivarius (strain CCHSS3) 347253STRE8Streptococcus salivarius (strain JIM8777) 388919STRSVStreptococcus sanguinis (strain SK36) 1307 Streptococcus suis 391295STRSYStreptococcus suis (strain 05ZYH33) 391296STRS2Streptococcus suis (strain 98HAH33) 568814STRS4Streptococcus suis (strain BM407) 423211STRGZStreptococcus suis (strain GZ1) 945704STREJStreptococcus suis (strain JS14) 218494STRSEStreptococcus suis (strain P1/7) 568813STRSXStreptococcus suis (strain SC84) 1308 Streptococcus thermophilus 264199STRT2Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) 322159STRTDStreptococcus thermophilus (strain ATCC BAA-491 / LMD-9) 299768STRT1Streptococcus thermophilus (strain CNRZ 1066) 767463STRTNStreptococcus thermophilus (strain ND03) 218495STRU0Streptococcus uberis (strain ATCC BAA-854 / 0140J) 186801 Clostridia 186802 Clostridiales 31979 Clostridiaceae 114627 Alkaliphilus 293826ALKMQAlkaliphilus metalliredigens (strain QYMF) 350688ALKOOAlkaliphilus oremlandii (strain OhILAs) 1029718ARTSSArthromitus sp. (strain SFB-mouse-Japan) 1485 Clostridium 1488 Clostridium acetobutylicum 272562CLOABClostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) 863638CLOAEClostridium acetobutylicum (strain EA 2018) 290402CLOB8Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) 1491 Clostridium botulinum 941968CLOB0Clostridium botulinum (strain H04402 065 / Type A5) 36826 Clostridium botulinum A 441770CLOB1Clostridium botulinum (strain ATCC 19397 / Type A) 441771CLOBHClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) 536232CLOBJClostridium botulinum (strain Kyoto / Type A2) 498214CLOBMClostridium botulinum (strain Loch Maree / Type A3) 36827 Clostridium botulinum B 515621CLOB6Clostridium botulinum (strain 657 / Type Ba4) 935198CLOBBClostridium botulinum (strain Eklund 17B / Type B) 498213CLOBKClostridium botulinum (strain Okra / Type B1) 508767CLOBAClostridium botulinum (strain Alaska E43 / Type E3) 36831 Clostridium botulinum F 758678CLOB2Clostridium botulinum (strain 230613 / Type F) 441772CLOBLClostridium botulinum (strain Langeland / NCTC 10281 / Type F) 573061CLOC7Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) 431943CLOK5Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) 748727CLOLDClostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) 386415CLONNClostridium novyi (strain NT) 1502 Clostridium perfringens 195102CLOPEClostridium perfringens (strain 13 / Type A) 195103CLOP1Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) 289380CLOPSClostridium perfringens (strain SM101 / Type A) 1507CLOS4Clostridium sp. (strain ATCC 29733 / VPI C48-50) 1042156CLOSSClostridium sp. (strain SY8519) 212717CLOTEClostridium tetani (strain Massachusetts / E88) 539000 Clostridiales Family XVII. Incertae Sedis 53633 Sulfobacillus acidophilus 679936SULADSulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) 1051632SULATSulfobacillus acidophilus (strain TPY) 644966THEM7Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) 186806 Eubacteriaceae 931626ACEWDAcetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1) 1730 Eubacterium 903814EUBLKEubacterium limosum (strain KIST612) 515620EUBE2Eubacterium eligens (strain ATCC 27750 / VPI C15-48) 498761HELMIHeliobacterium modesticaldum (strain ATCC 51547 / Ice1) 2304686 Hungateiclostridiaceae 2304692 Hungateiclostridium 720554HUNCDHungateiclostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) 1515 Hungateiclostridium thermocellum 203119HUNT2Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) 637887HUNT1Hungateiclostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8) 699246MAGIUMageeibacillus indolicus (strain UPII9-5) 394503RUMCHRuminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) 186803 Lachnospiraceae 515622BUTPBButyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) 642492CELLDCellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5)Clostridium lentocellum 1506553 Lachnoclostridium 610130CLOSWClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) 357809LACP7Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) 585394ROSHARoseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) 515619AGARVAgathobacter rectalis (strain ATCC 33656 / DSM 3377 / JCM 17463 / KCTC 5835 / VPI 0990) 693746OSCVSOscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) 186807 Peptococcaceae 477974DESAPDesulforudis audaxviator (strain MP104C) 36853 Desulfitobacterium 871963DESDLDesulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) 49338 Desulfitobacterium hafniense 272564DESHDDesulfitobacterium hafniense (strain DCB-2 / DSM 10664) 138119DESHYDesulfitobacterium hafniense (strain Y51) 485916DESASDesulfofarcimen acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644 / 5575) 760568DESK7Desulfofundulus kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) 79206 Desulfosporosinus 646529DESAJDesulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) 768704DESMDDesulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) 768706DESODDesulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628)Desulfotomaculum orientis 1562 Desulfotomaculum 868595DESCCDesulfotomaculum nigrificans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) 349161DESRMDesulfotomaculum reducens (strain MI-1) 696281DESRLDesulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIMB 8452 / DL) 370438PELTSPelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) 645991SYNGFSyntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) 635013THEPJThermincola potens (strain JR) 186804 Peptostreptococcaceae 499177ACESDAcetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654) 1496 Clostridioides difficile 272563PEPD6Peptoclostridium difficile (strain 630)Clostridium difficile 645463PEPDRPeptoclostridium difficile (strain R20291)Clostridium difficile 546269FILADFilifactor alocis (strain ATCC 35896 / D40 B5) 541000 Ruminococcaceae 663278ETHHYEthanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) 1263 Ruminococcus 697329RUMA7Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) 213810RUMC1Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / KCTC 15320 / 18P13) 292459SYMTHSymbiobacterium thermophilum (strain T / IAM 14863) 68298 Syntrophomonadaceae 335541SYNWWSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) 643648SYNLTSyntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) 53433 Halanaerobiales 972 Halanaerobiaceae 2330 Halanaerobium 656519HALHGHalanaerobium hydrogeniformansHalanaerobium sp. (strain sapolanicus) 572479HALPGHalanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) 373903HALOHHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) 53434 Halobacteroidaceae 574087ACEAZAcetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) 748449HALHCHalobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) 457570NATTJNatranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) 68295 Thermoanaerobacterales 186814 Thermoanaerobacteraceae 273068CALS4Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) 246194CARHZCarboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) 264732MOOTAMoorella thermoacetica (strain ATCC 39073 / JCM 9320) 1209989TEPAETepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) 1089553THEPSThermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) 1754 Thermoanaerobacter 580331THEIAThermoanaerobacter italicus (strain DSM 9252 / Ab9) 583358THEM3Thermoanaerobacter mathranii subsp. mathranii (strain DSM 11426 / CIP 108742 / A3) 340099THEP3Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) 573062THESXThermoanaerobacter sp. (strain X513) 399726THEPXThermoanaerobacter sp. (strain X514) 543371 Thermoanaerobacterales Family III. Incertae Sedis 44000 Caldicellulosiruptor 521460CALBDCaldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)Anaerocellum thermophilum 632292CALH1Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) 632335CALKICaldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) 632348CALK2Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) 608506CALOOCaldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) 632518CALOWCaldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) 351627CALS8Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) 28895 Thermoanaerobacterium 1094508THESWThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) 580327THETCThermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814)Clostridium thermosaccharolyticum 858215THEXLThermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) 555079THEOJThermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) 697281MAHA5Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) 650150ERYRFErysipelothrix rhusiopathiae (strain Fujisawa) 909932 Negativicutes 904 Acidaminococcus 591001ACIFVAcidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) 568816ACIIRAcidaminococcus intestini (strain RyC-MR95) 970 Selenomonas 927704SELRLSelenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) 546271SELS3Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) 479436VEIPTVeillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3)Veillonella alcalescens 1737405 Tissierellales 1128398GOTA9Gottschalkia acidurici (strain ATCC 7906 / DSM 604 / BCRC 14475 / CIP 104303 / NCIMB 10678 / 9a) 1570339 Peptoniphilaceae 525919ANAPDAnaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) 334413FINM2Finegoldia magna (strain ATCC 29328) 203491 Fusobacteriales 203492 Fusobacteriaceae 190304FUSNNFusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) 572544ILYPCIlyobacter polytropus (strain DSM 2926 / CuHBu1) 1129771 Leptotrichiaceae 523794LEPBDLeptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249 / C-1013-b) 526218SEBTESebaldella termitidis (strain ATCC 33386 / NCTC 11300) 519441STRM9Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) 379066GEMATGemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) 795748 Ignavibacteriales 945713IGNAJIgnavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) 1191523MELRPMelioribacter roseus (strain JCM 17771 / P3M-2) 1266370NITG3Nitrospina gracilis (strain 3/211) 189779 Nitrospiraceae 179 Leptospirillum 1162668LEPFCLeptospirillum ferrooxidans (strain C2-3) 1048260LEPFMLeptospirillum ferriphilum (strain ML-04) 42253NITMONitrospira moscoviensis 289376THEYDThermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) 203682 Planctomycetes 1142394PHYMFPhycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) 112 Planctomycetales 1763524 Isosphaeraceae 575540ISOPIIsosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) 886293SINADSingulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) 126 Planctomycetaceae 530564PIRSDPirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128)Pirella staleyi 521674PLAL2Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) 243090RHOBARhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) 756272RUBBRRubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)Planctomyces brasiliensis 1224 Proteobacteria 119977 Acidithiobacillus 990288ACICSAcidithiobacillus caldus (strain SM-1) 920 Acidithiobacillus ferrooxidans 243159ACIF2Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455) 380394ACIF5Acidithiobacillus ferrooxidans (strain ATCC 53993) 28211 Alphaproteobacteria 76892 Caulobacteraceae 573065ASTECAsticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) 633149BRESCBrevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) 75 Caulobacter 509190CAUSTCaulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) 366602CAUSKCaulobacter sp. (strain K31) 190650 Caulobacter vibrioides (strain ATCC 19089 / CB15) 190650CAUVCCaulobacter vibrioides (strain ATCC 19089 / CB15) (disambiguate CAUVC) 565050CAUVNCaulobacter vibrioides (strain NA1000 / CB15N) 450851PHEZHPhenylobacterium zucineum (strain HLK1) 156889MAGMMMagnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) 314260PARBHParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) 198251 Candidatus Pelagibacter 1002672PELSMPelagibacter sp. (strain IMCC9063) 335992PELUBPelagibacter ubique (strain HTCC1062) 356 Rhizobiales 773 Bartonella 360095BARBKBartonella bacilliformis (strain ATCC 35685 / NCTC 12138 / KC583) 696125BARC7Bartonella clarridgeiae (strain CIP 104772 / 73) 634504BARGABartonella grahamii (strain as4aup) 283166BARHEBartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1)Rochalimaea henselae 283165BARQUBartonella quintana (strain Toulouse) 382640BART1Bartonella tribocorum (strain CIP 105476 / IBS 506) 1094497BARVWBartonella vinsonii subsp. berkhoffii (strain Winnie) 45404 Beijerinckiaceae 395963BEII9Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) 395965METSBMethylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2) 41294 Bradyrhizobiaceae 374 Bradyrhizobium 224911BRADUBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) 288000BRASBBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) 114615BRASOBradyrhizobium sp. (strain ORS 278) 911 Nitrobacter 323097NITHXNitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14) 323098NITWNNitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) 40137 Oligotropha carboxidovorans 504832OLICOOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) 1031710OLICMOligotropha carboxidovorans (strain OM4) 1076 Rhodopseudomonas palustris 258594RHOPARhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) 316055RHOP5Rhodopseudomonas palustris (strain BisA53) 316056RHOPBRhodopseudomonas palustris (strain BisB18) 316057RHOPSRhodopseudomonas palustris (strain BisB5) 652103RHOPXRhodopseudomonas palustris (strain DX-1) 316058RHOP2Rhodopseudomonas palustris (strain HaA2) 395960RHOPTRhodopseudomonas palustris (strain TIE-1) 118882 Brucellaceae 234 Brucella 235 Brucella abortus 359391BRUA2Brucella abortus (strain 2308) 430066BRUA1Brucella abortus (strain S19) 262698BRUABBrucella abortus biovar 1 (strain 9-941) 483179BRUC2Brucella canis (strain ATCC 23365 / NCTC 10854) 29459 Brucella melitensis 703352BRUM5Brucella melitensis (strain M5-90) 224914BRUMEBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) 546272BRUMBBrucella melitensis biotype 2 (strain ATCC 23457) 568815BRUMCBrucella microti (strain CCM 4915) 444178BRUO2Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) 29461 Brucella suis 204722BRUSUBrucella suis biovar 1 (strain 1330) 470137BRUSIBrucella suis (strain ATCC 23445 / NCTC 10510) 439375OCHA4Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / JCM 21032 / NBRC 15819 / NCTC 12168) 45401 Hyphomicrobiaceae 1079BLAVIBlastochloris viridisRhodopseudomonas viridis 81 Hyphomicrobium 582899HYPDAHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) 717785HYPSMHyphomicrobium sp. (strain MC1) 1082931PELHBPelagibacterium halotolerans (strain DSM 22347 / JCM 15775 / CGMCC 1.7692 / B2) 648757RHOVTRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) 119045 Methylobacteriaceae 407 Methylobacterium 460265METNOMethylobacterium nodulans (strain LMG 21967 / CNCM I-2342 / ORS 2060) 426355METRJMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831 / NBRC 15690 / NCIMB 10815 / 0-1) 426117METS4Methylobacterium sp. (strain 4-46) 2282523 Methylorubrum 408 Methylorubrum extorquens 272630METEAMethylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) 440085METC4Methylorubrum extorquens (strain CM4 / NCIMB 13688) 661410METEDMethylorubrum extorquens (strain DSM 6343 / CIP 106787 / DM4) 419610METEPMethylorubrum extorquens (strain PA1) 441620METPBMethylorubrum populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) 187303METSZMethylocystis sp. (strain SC2) 69277 Phyllobacteriaceae 266779CHESBChelativorans sp. (strain BNC1) 68287 Mesorhizobium 754035MESAWMesorhizobium australicum (strain HAMBI 3006 / LMG 24608 / WSM2073) 765698MESCWMesorhizobium ciceri biovar biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) 266835RHILOMesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)Mesorhizobium loti 82115 Rhizobiaceae 357 Agrobacterium 861208AGRSHAgrobacterium sp. (strain H13-3)Rhizobium lupini (strain H13-3) 1183400 Agrobacterium tumefaciens complex 176299AGRFCAgrobacterium fabrum (strain C58 / ATCC 33970) 311403AGRRKAgrobacterium radiobacter (strain K84 / ATCC BAA-868) 311402AGRVSAgrobacterium vitis (strain S4 / ATCC BAA-846) 537021LIBAPLiberibacter asiaticus (strain psy62) 379 Rhizobium 29449 Rhizobium etli 347834RHIECRhizobium etli (strain CFN 42 / ATCC 51251) 491916RHIE6Rhizobium etli (strain CIAT 652) 384 Rhizobium leguminosarum 386 Rhizobium leguminosarum bv. trifolii 395491RHILSRhizobium leguminosarum bv. trifolii (strain WSM1325) 395492RHILWRhizobium leguminosarum bv. trifolii (strain WSM2304) 216596RHIL3Rhizobium leguminosarum bv. viciae (strain 3841) 28105 Sinorhizobium 380 Rhizobium fredii 1117943RHIFHRhizobium fredii (strain HH103)Sinorhizobium fredii 394SINFNSinorhizobium fredii (strain NBRC 101917 / NGR234) 382 Rhizobium meliloti 266834RHIMERhizobium meliloti (strain 1021)Ensifer melilotiSinorhizobium meliloti 693982SINMKSinorhizobium meliloti (strain AK83) 698936SINMBSinorhizobium meliloti (strain BL225C) 707241SINMMSinorhizobium meliloti (strain SM11) 366394SINMWSinorhizobium medicae (strain WSM419) 402881PARL1Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) 335928 Xanthobacteraceae 438753AZOC5Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) 639283STANDStarkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) 78245XANP2Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) 573234HODCDHodgkinia cicadicola (strain Dsem) 204455 Rhodobacterales 69657 Hyphomonadaceae 582402HIRBIHirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) 228405HYPNAHyphomonas neptunium (strain ATCC 15444) 394221MARMMMaricaulis maris (strain MCS10) 31989 Rhodobacteraceae 398580DINSHDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) 290400JANSCJannaschia sp. (strain CCS1) 92945 Ketogulonicigenium vulgare 759362KETVWKetogulonicigenium vulgare (strain WSH-001) 880591KETVYKetogulonicigenium vulgare (strain Y25) 314256OCEGHOceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 / HTCC2516) 318586PARDPParacoccus denitrificans (strain Pd 1222) 391619PHAIBPhaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / JCM 21319 / NBRC 16654 / NCIMB 13546 / BS107) 911045PSEUVPseudovibrio sp. (strain FO-BEG1) 1060 Rhodobacter 272942RHOCBRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) 1063 Rhodobacter sphaeroides 272943RHOS4Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) 349102RHOS5Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) 349101RHOS1Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) 557760RHOSKRhodobacter sphaeroides (strain KD131 / KCTC 12085) 2433 Roseobacter 375451ROSDORoseobacter denitrificans (strain ATCC 33942 / OCh 114) 391595ROSLORoseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) 97050 Ruegeria 246200RUEPORuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)Silicibacter pomeroyi 292414RUESTRuegeria sp. (strain TM1040)Silicibacter sp. 204441 Rhodospirillales 433 Acetobacteraceae 634452ACEP3Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) 522 Acidiphilium 349163ACICJAcidiphilium cryptum (strain JF-5) 926570ACIMAAcidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 / AIU301) 272568GLUDAGluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) 290633GLUOXGluconobacter oxydans (strain 621H)Gluconobacter suboxydans 391165GRABCGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) 634177KOMMNKomagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG 1693 / Kondo 51) 41295 Rhodospirillaceae 862719AZOL4Azospirillum lipoferum (strain 4B) 342108MAGSAMagnetospirillum magneticum (strain AMB-1 / ATCC 700264) 1081 Rhodospirillum 414684RHOCSRhodospirillum centenum (strain ATCC 51521 / SW) 269796RHORTRhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) 1110502TISMKTistrella mobilis (strain KA081020-065) 766 Rickettsiales 942 Anaplasmataceae 768 Anaplasma 770 Anaplasma marginale 320483ANAMFAnaplasma marginale (strain Florida) 234826ANAMMAnaplasma marginale (strain St. Maries) 212042ANAPZAnaplasma phagocytophilum (strain HZ) 943 Ehrlichia 269484EHRCJEhrlichia canis (strain Jake) 205920EHRCREhrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas) 779 Ehrlichia ruminantium 302409EHRRGEhrlichia ruminantium (strain Gardel) 254945EHRRWEhrlichia ruminantium (strain Welgevonden) 33993 Neorickettsia 434131NEORINeorickettsia risticii (strain Illinois) 222891NEOSMNeorickettsia sennetsu (strain ATCC VR-367 / Miyayama) 953 Wolbachia 292805WOLTRWolbachia sp. subsp. Brugia malayi (strain TRS) 570417WOLPPWolbachia pipientis subsp. Culex pipiens (strain wPip) 955WOLPIWolbachia pipientis 163164WOLPMWolbachia pipientis wMel 66084WOLWRWolbachia sp. subsp. Drosophila simulans (strain wRi) 696127MIDMIMidichloria mitochondrii (strain IricVA) 33988 Rickettsieae 784 Orientia tsutsugamushi 357244ORITBOrientia tsutsugamushi (strain Boryong) 334380ORITIOrientia tsutsugamushi (strain Ikeda) 780 Rickettsia 347255RICAERickettsia africae (strain ESF-5) 293614RICAHRickettsia akari (strain Hartford) 1105111RICAGRickettsia amblyommatis (strain GAT-30V) 1105110RICACRickettsia australis (strain Cutlack) 33990 Rickettsia bellii 391896RICB8Rickettsia bellii (strain OSU 85-389) 336407RICBRRickettsia bellii (strain RML369-C) 293613RICCKRickettsia canadensis (strain McKiel) 272944RICCNRickettsia conorii (strain ATCC VR-613 / Malish 7) 315456RICFERickettsia felis (strain ATCC VR-1525 / URRWXCal2)Rickettsia azadi 652620RICJYRickettsia japonica (strain ATCC VR-1363 / YH) 416276RICM5Rickettsia massiliae (strain Mtu5) 1105114RICMSRickettsia montanensis (strain OSU 85-930) 1105108RICPTRickettsia parkeri (strain Portsmouth) 562019RICPURickettsia peacockii (strain Rustic) 481009RICP3Rickettsia philipii (strain 364D) 782 Rickettsia prowazekii 272947RICPRRickettsia prowazekii (strain Madrid E) 449216RICPPRickettsia prowazekii (strain Rp22) 1105113RICR3Rickettsia rhipicephali (strain 3-7-female6-CWPP) 783 Rickettsia rickettsii 452659RICRORickettsia rickettsii (strain Iowa) 392021RICRSRickettsia rickettsii (strain Sheila Smith) 941638RICS1Rickettsia slovaca (strain 13-B) 257363RICTYRickettsia typhi (strain ATCC VR-144 / Wilmington) 204457 Sphingomonadales 314225ERYLHErythrobacter litoralis (strain HTCC2594) 41297 Sphingomonadaceae 279238NOVADNovosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199) 452662SPHJUSphingobium japonicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S) 392499SPHWWSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) 317655SPHALSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) 542 Zymomonas mobilis 120045 Zymomonas mobilis subsp. mobilis 555217ZYMMAZymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1) 264203ZYMMOZymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) 622759ZYMMNZymomonas mobilis subsp. mobilis (strain NCIMB 11163 / B70) 579138ZYMMTZymomonas mobilis subsp. pomaceae (strain ATCC 29192 / JCM 10191 / NBRC 13757 / NCIMB 11200 / NRRL B-4491) 82117 unclassified Alphaproteobacteria 856793MICAAMicavibrio aeruginosavorus (strain ARL-13) 991905POLGSPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) 488538PUNMIPuniceispirillum marinum (strain IMCC1322) 28216 Betaproteobacteria 80840 Burkholderiales 506 Alcaligenaceae 762376ACHXAAchromobacter xylosoxidans (strain A8) 1036672ADVKWAdvenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001)Tetrathiobacter kashmirensis 517 Bordetella 360910BORA1Bordetella avium (strain 197N) 518 Bordetella bronchiseptica 257310BORBRBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) 1208658BORBMBordetella bronchiseptica (strain MO149) 257311BORPABordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) 520 Bordetella pertussis 568706BORP1Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 / 18323) 1017264BORPCBordetella pertussis (strain CS) 257313BORPEBordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) 340100BORPDBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) 1007105PUSSTPusillimonas sp. (strain T7-7) 937774TAYEMTaylorella equigenitalis (strain MCE9) 119060 Burkholderiaceae 32008 Burkholderia 87882 Burkholderia cepacia complex 152480 Burkholderia ambifaria 339670BURCMBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) 398577BURA4Burkholderia ambifaria (strain MC40-6) 95486 Burkholderia cenocepacia 216591BURCJBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) 331271BURCABurkholderia cenocepacia (strain AU 1054) 331272BURCHBurkholderia cenocepacia (strain HI2424) 406425BURCCBurkholderia cenocepacia (strain MC0-3) 482957BURL3Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194) 395019BURM1Burkholderia multivorans (strain ATCC 17616 / 249) 269482BURVGBurkholderia vietnamiensis (strain G4 / LMG 22486) 999541BURGSBurkholderia gladioli (strain BSR3) 626418BURGBBurkholderia glumae (strain BGR1) 13373 Burkholderia mallei 243160BURMABurkholderia mallei (strain ATCC 23344) 412022BURM9Burkholderia mallei (strain NCTC 10229) 320389BURM7Burkholderia mallei (strain NCTC 10247) 320388BURMSBurkholderia mallei (strain SAVP1) 28450 Burkholderia pseudomallei 357348BURP0Burkholderia pseudomallei (strain 1106a) 320372BURP1Burkholderia pseudomallei (strain 1710b) 320373BURP6Burkholderia pseudomallei (strain 668) 272560BURPSBurkholderia pseudomallei (strain K96243) 640512BURSGBurkholderia sp. (strain CCGE1003) 271848BURTABurkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264) 106589 Cupriavidus 266264CUPMCCupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) 106590 Cupriavidus necator 381666CUPNHCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) 1042878CUPNNCupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1)Ralstonia eutropha 264198CUPPJCupriavidus pinatubonensis (strain JMP 134 / LMG 1197) 977880CUPTRCupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1) 882378PARRHParaburkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) 1822464 Paraburkholderia 640511BURSCBurkholderia sp. (strain CCGE1002) 391038PARP8Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815) 398527PARPJParaburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) 266265PARXLParaburkholderia xenovorans (strain LB400) 44013 Polynucleobacter 312153POLAQPolynucleobacter asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) 452638POLNSPolynucleobacter necessarius subsp. necessarius (strain STIR1) 48736 Ralstonia 329 Ralstonia pickettii 428406RALP1Ralstonia pickettii (strain 12D) 402626RALPJRalstonia pickettii (strain 12J) 305 Ralstonia solanacearum 305RALSLRalstonia solanacearum (disambiguate RALSL) 267608RALSORalstonia solanacearum (strain GMI1000) 1031711RALS8Ralstonia solanacearum (strain Po82) 80864 Comamonadaceae 12916 Acidovorax 643561ACIAPAcidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) 397945ACIACAcidovorax citrulli (strain AAC00-1) 535289ACIETAcidovorax ebreus (strain TPSY) 232721ACISJAcidovorax sp. (strain JS42) 596154ALIDKAlicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) 688245COMT2Comamonas testosteroni (strain CNB-2) 80865 Delftia 398578DELASDelftia acidovorans (strain DSM 14801 / SPH-1) 742013DELSCDelftia sp. (strain Cs1-4) 52972 Polaromonas 365044POLNAPolaromonas naphthalenivorans (strain CJ2) 296591POLSJPolaromonas sp. (strain JS666 / ATCC BAA-500) 365046RAMTTRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) 338969RHOFTRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)Rhodoferax ferrireducens 34073 Variovorax paradoxus 595537VARPEVariovorax paradoxus (strain EPS) 543728VARPSVariovorax paradoxus (strain S110) 391735VEREIVerminephrobacter eiseniae (strain EF01-2) 75682 Oxalobacteraceae 871271ZINICZinderia insecticola (strain CARI) 1005048COLFTCollimonas fungivorans (strain Ter331) 757424HERSSHerbaspirillum seropedicae (strain SmR1) 204773HERARHerminiimonas arsenicoxydans 375286JANMAJanthinobacterium sp. (strain Marseille) 224471 Burkholderiales Genera incertae sedis 395495LEPCPLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) 420662METPPMethylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1) 983917RUBGIRubrivivax gelatinosus (strain NBRC 100245 / IL144) 75379THIK1Thiomonas intermedia (strain K12)Thiobacillus intermedius 206351 Neisseriales 1499392 Chromobacteriaceae 243365CHRVOChromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) 557598LARHHLaribacter hongkongensis (strain HLHK9) 748280PSEULPseudogulbenkiania sp. (strain NH8B) 482 Neisseria 485 Neisseria gonorrhoeae 242231NEIG1Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) 521006NEIG2Neisseria gonorrhoeae (strain NCCP11945) 487 Neisseria meningitidis 662598NEIMLNeisseria meningitidis (strain alpha14) 122587NEIMANeisseria meningitidis serogroup A / serotype 4A (strain Z2491) 942513NEIMWNeisseria meningitidis serogroup A (strain WUE 2594) 491 Neisseria meningitidis serogroup B 122586NEIMBNeisseria meningitidis serogroup B (strain MC58) 630588NEIM7Neisseria meningitidis serogroup B (strain alpha710) 909420NEIMHNeisseria meningitidis serogroup B / serotype 15 (strain H44/76) 935599NEIMGNeisseria meningitidis serogroup B (strain G2136) 935591NEIMMNeisseria meningitidis serogroup B (strain M01-240149) 935588NEIMPNeisseria meningitidis serogroup B (strain M01-240355) 935593NEIMONeisseria meningitidis serogroup B (strain M04-240196) 935589NEIMNNeisseria meningitidis serogroup B (strain NZ-05/33) 135720 Neisseria meningitidis serogroup C 374833NEIM0Neisseria meningitidis serogroup C (strain 053442) 604162NEIM8Neisseria meningitidis serogroup C (strain 8013) 272831NEIMFNeisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18) 32003 Nitrosomonadales 90627 Gallionellaceae 395494GALCSGallionella capsiferriformans (strain ES-2)Gallionella ferruginea capsiferriformans (strain ES-2) 580332SIDLESideroxydans lithotrophicus (strain ES-1) 32011 Methylophilaceae 265072METFKMethylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) 583345METMLMethylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) 81682 Methylovorus 582744METGSMethylovorus glucosetrophus (strain SIP3-4) 887061METS6Methylovorus sp. (strain MP688) 206379 Nitrosomonadaceae 914 Nitrosomonas 228410NITEUNitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) 335283NITECNitrosomonas eutropha (strain DSM 101675 / C91) 261292NITSINitrosomonas sp. (strain Is79A3) 323848NITMUNitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) 292415THIDAThiobacillus denitrificans (strain ATCC 25259) 206389 Rhodocyclales 159087DECARDechloromonas aromatica (strain RCB) 75787 Rhodocyclaceae 76114AROAEAromatoleum aromaticum (strain EbN1) 640081AZOOPAzospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS)Azospira oryzae 2008794 Zoogloeaceae 62928AZOSBAzoarcus sp. (strain BH72) 85643THASPThauera sp. (strain MZ1T) 119066 unclassified Betaproteobacteria 522306ACCPUAccumulibacter phosphatis (strain UW-1) 891398TREPPTremblaya princeps (strain PCIT) 1236 Gammaproteobacteria 84642 Aeromonadaceae 642 Aeromonas 380703AERHHAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240) 382245AERS4Aeromonas salmonicida (strain A449) 998088AERVBAeromonas veronii (strain B565) 511062OCESGOceanimonas sp. (strain GK1) 595494TOLATTolumonas auensis (strain DSM 9187 / TA4) 135622 Alteromonadales 72275 Alteromonadaceae 226 Alteromonas 28108 Alteromonas macleodii 1004787ALTMBAlteromonas macleodii (strain Balearic Sea AD45) 1004785ALTMSAlteromonas macleodii (strain Black Sea 11) 1004788ALTMEAlteromonas macleodii (strain English Channel 673) 1774373ALTMDAlteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) 715451ALTNAAlteromonas naphthalenivorans 2742 Marinobacter 225937MARAHMarinobacter adhaerens (strain DSM 23420 / HP15) 351348MARHVMarinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) 167879COLP3Colwellia psychrerythraea (strain 34H / ATCC BAA-681)Vibrio psychroerythus 550540FERBDFerrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) 283942IDILOIdiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) 53246 Pseudoalteromonas 342610PSEA6Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) 326442PSEHTPseudoalteromonas haloplanktis (strain TAC 125) 234831PSEU9Pseudoalteromonas sp. (strain SM9913) 357804PSYINPsychromonas ingrahamii (strain 37) 22 Shewanella 326297SHEAMShewanella amazonensis (strain ATCC BAA-1098 / SB2B) 62322 Shewanella baltica 325240SHEB5Shewanella baltica (strain OS155 / ATCC BAA-1091) 402882SHEB8Shewanella baltica (strain OS185) 399599SHEB9Shewanella baltica (strain OS195) 407976SHEB2Shewanella baltica (strain OS223) 693973SHEB6Shewanella baltica (strain OS678) 318161SHEDOShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) 318167SHEFNShewanella frigidimarina (strain NCIMB 400) 458817SHEHHShewanella halifaxensis (strain HAW-EB4) 323850SHELPShewanella loihica (strain ATCC BAA-1088 / PV-4) 211586SHEONShewanella oneidensis (strain MR-1) 398579SHEPAShewanella pealeana (strain ATCC 700345 / ANG-SQ1) 225849SHEPWShewanella piezotolerans (strain WP3 / JCM 13877) 24 Shewanella putrefaciens 399804SHEP2Shewanella putrefaciens (strain 200) 319224SHEPCShewanella putrefaciens (strain CN-32 / ATCC BAA-453) 425104SHESHShewanella sediminis (strain HAW-EB3) 94122SHESAShewanella sp. (strain ANA-3) 60480SHESMShewanella sp. (strain MR-4) 60481SHESRShewanella sp. (strain MR-7) 351745SHESWShewanella sp. (strain W3-18-1) 637905SHEVDShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) 392500SHEWMShewanella woodyi (strain ATCC 51908 / MS32) 868 Cardiobacteriaceae 638300CARH6Cardiobacterium hominis (strain ATCC 15826 / DSM 8339 / NCTC 10426 / 6573) 246195DICNVDichelobacter nodosus (strain VCS1703A) 1706371 Cellvibrionaceae 498211CELJUCellvibrio japonicus (strain Ueda107) 203122SACD2Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) 1117647SIMASSimiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) 377629TERTTTeredinibacter turnerae (strain ATCC 39867 / T7901) 135613 Chromatiales 1046 Chromatiaceae 572477ALLVDAllochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D)Chromatium vinosum 1227 Nitrosococcus 472759NITHNNitrosococcus halophilus (strain Nc4) 323261NITOCNitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) 105559NITWCNitrosococcus watsoni (strain C-113) 765911THIV6Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111)Chromatium violascens 72276 Ectothiorhodospiraceae 187272ALKEHAlkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) 349124HALHLHalorhodospira halophila (strain DSM 244 / SL1) 106633 Thioalkalivibrio 396595THISKThioalkalivibrio sp. (strain K90mix) 396588THISHThioalkalivibrio sulfidiphilus (strain HL-EbGR7) 555778HALNCHalothiobacillus neapolitanus (strain ATCC 23641 / c2) 91347 Enterobacterales 543 Enterobacteriaceae 903503MOREPMoranella endobia (strain PCIT) 515618RIEPURiesia pediculicola (strain USDA) 544 Citrobacter 290338CITK8Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) 637910CITRICitrobacter rodentium (strain ICC168) 413496 Cronobacter 290339CROS8Cronobacter sakazakii (strain ATCC BAA-894) 693216CROTZCronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) 547 Enterobacter 354276 Enterobacter cloacae complex 640513ENTALEnterobacter asburiae (strain LF7a) 716541ENTCCEnterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56) 399742ENT38Enterobacter sp. (strain 638) 561 Escherichia 562 Escherichia coli 1040638ECOLXEscherichia coli (disambiguate ECOLX) 885275ECOC1Escherichia coli (strain 'clone D i14') 885276ECOC2Escherichia coli (strain 'clone D i2') 585055ECO55Escherichia coli (strain 55989 / EAEC) 536056ECOD1Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1) 595495ECOKOEscherichia coli (strain ATCC 55124 / KO11FL) 566546ECOLWEscherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W) 511693ECOBBEscherichia coli (strain B / BL21) 469008ECOBDEscherichia coli (strain B / BL21-DE3) 83333 Escherichia coli (strain K12) 511145ECOLIEscherichia coli (strain K12) (disambiguate ECOLI) 316385ECODHEscherichia coli (strain K12 / DH10B) 595496ECOBWEscherichia coli (strain K12 / MC4100 / BW2952) 409438ECOSEEscherichia coli (strain SE11) 439855ECOSMEscherichia coli (strain SMS-3-5 / SECEC) 869729ECOUMEscherichia coli (strain UM146) 364106ECOUTEscherichia coli (strain UTI89 / UPEC) 413997ECOBREscherichia coli (strain B / REL606) 481805ECOLCEscherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) 585395ECO10Escherichia coli O103:H2 (strain 12009 / EHEC) 1133853ECO1EEscherichia coli O104:H4 (strain 2009EL-2071) 585396ECO1AEscherichia coli O111:H- (strain 11128 / EHEC) 574521ECO27Escherichia coli O127:H6 (strain E2348/69 / EPEC) 331111ECO24Escherichia coli O139:H28 (strain E24377A / ETEC) 431946ECOS5Escherichia coli O150:H5 (strain SE15) 83334 Escherichia coli O157:H7 155864ECO57Escherichia coli O157:H7 (disambiguate ECO57) 444450ECO5EEscherichia coli O157:H7 (strain EC4115 / EHEC) 544404ECO5TEscherichia coli O157:H7 (strain TW14359 / EHEC) 585056ECOLUEscherichia coli O17:K52:H18 (strain UMN026 / ExPEC) 714962ECOKIEscherichia coli O18:K1:H7 (strain IHE3034 / ExPEC) 405955ECOK1Escherichia coli O1:K1 / APEC 573235ECO26Escherichia coli O26:H11 (strain 11368 / EHEC) 216592ECO44Escherichia coli O44:H18 (strain 042 / EAEC) 585035ECO45Escherichia coli O45:K1 (strain S88 / ExPEC) 701177ECOCBEscherichia coli O55:H7 (strain CB9615 / EPEC) 199310ECOL6Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) 362663ECOL5Escherichia coli O6:K15:H31 (strain 536 / UPEC) 316401ECOH1Escherichia coli O78:H11 (strain H10407 / ETEC) 585057ECO7IEscherichia coli O7:K1 (strain IAI39 / ExPEC) 585034ECO8AEscherichia coli O8 (strain IAI1) 585397ECO81Escherichia coli O81 (strain ED1a) 685038ECO8NEscherichia coli O83:H1 (strain NRG 857C / AIEC) 331112ECOHSEscherichia coli O9:H4 (strain HS) 655817ECOABEscherichia coli OR:K5:H- (strain ABU 83972) 585054ESCF3Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) 570 Klebsiella 1028307KLEAKKlebsiella aerogenes (strain ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006) 1006551KLEOKKlebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) 573 Klebsiella pneumoniae 507522KLEP3Klebsiella pneumoniae (strain 342) 72407 Klebsiella pneumoniae subsp. pneumoniae 272620KLEP7Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) 1125630KLEPHKlebsiella pneumoniae subsp. pneumoniae (strain HS11286) 640131KLEVTKlebsiella variicola (strain At-22) 701347ENTLSEnterobacter lignolyticus (strain SCF1) 590 Salmonella 218493SALBCSalmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419) 28901 Salmonella enterica 59201 Salmonella enterica I 439851SALDCSalmonella dublin (strain CT_02021853) 454166SALA4Salmonella agona (strain SL483) 321314SALCHSalmonella choleraesuis (strain SC-B67) 1081093SALPSSalmonella pullorum (strain RKS5078 / SGSC2294) 454169SALHSSalmonella heidelberg (strain SL476) 1016998SALPBSalmonella paratyphi B (strain ATCC BAA-1250 / SPB7) 476213SALPCSalmonella paratyphi C (strain RKS4594) 439843SALSVSalmonella schwarzengrund (strain CVM19633) 550537SALEPSalmonella enteritidis PT4 (strain P125109) 550538SALG2Salmonella gallinarum (strain 287/91 / NCTC 13346) 423368SALNSSalmonella newport (strain SL254) 54388 Salmonella paratyphi A 554290SALPKSalmonella paratyphi A (strain AKU_12601) 295319SALPASalmonella paratyphi A (strain ATCC 9150 / SARB42) 220341SALTISalmonella typhi 90371 Salmonella typhimurium 909946SALT4Salmonella typhimurium (strain 4/74) 568708SALTDSalmonella typhimurium (strain D23580) 99287 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) 99287SALTYSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (disambiguate SALTY) 588858SALT1Salmonella typhimurium (strain 14028s / SGSC 2262) 216597SALTSSalmonella typhimurium (strain SL1344) 41514SALARSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) 620 Shigella 621 Shigella boydii 344609SHIB3Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) 300268SHIBSShigella boydii serotype 4 (strain Sb227) 300267SHIDSShigella dysenteriae serotype 1 (strain Sd197) 623 Shigella flexneri 623SHIFLShigella flexneri (disambiguate SHIFL) 373384SHIF8Shigella flexneri serotype 5b (strain 8401) 591020SHIF2Shigella flexneri serotype X (strain 2002017) 300269SHISSShigella sonnei (strain Ss046) 630626SHIBCShimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74)Escherichia blattae 191675 unclassified Enterobacteriaceae 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 203804 Candidatus Blochmannia 203907BLOFLBlochmannia floridanus 291272BLOPBBlochmannia pennsylvanicus (strain BPEN) 859654BLOVBBlochmannia vafer (strain BVAF) 572265HAMD5Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) 693444ENTBFEnterobacteriaceae bacterium (strain FGI 57) 1903409 Erwiniaceae 9 Buchnera aphidicola 118099 Buchnera aphidicola (Acyrthosiphon pisum) 107806 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) 107806BUCAIBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (disambiguate BUCAI) 563178BUCA5Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) 713600BUCAJBuchnera aphidicola subsp. Acyrthosiphon pisum (strain JF98) 713601BUCAFBuchnera aphidicola subsp. Acyrthosiphon pisum (strain JF99) 713603BUCA0Buchnera aphidicola subsp. Acyrthosiphon pisum (strain LL01) 561501BUCATBuchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) 224915BUCBPBuchnera aphidicola subsp. Baizongia pistaciae (strain Bp) 372461BUCCCBuchnera aphidicola subsp. Cinara cedri (strain Cc) 198804BUCAPBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) 118110BUCSCBuchnera aphidicola subsp. Schlechtendalia chinensis 551 Erwinia 552 Erwinia amylovora 716540ERWAEErwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3) 665029ERWACErwinia amylovora (strain CFBP1430) 634500ERWBEErwinia billingiae (strain Eb661) 79967 Erwinia pyrifoliae 644651ERWP6Erwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96) 634499ERWPEErwinia pyrifoliae (strain Ep1/96) 215689ERWSEErwinia sp. (strain Ejp617) 465817ERWT9Erwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99) 53335 Pantoea 553 Pantoea ananas 932677PANAAPantoea ananatis (strain AJ13355) 706191PANAMPantoea ananatis (strain LMG 20103) 592316PANSAPantoea sp. (strain At-9b) 712898PANVCPantoea vagans (strain C9-1)Pantoea agglomerans (strain C9-1) 36870WIGBRWigglesworthia glossinidia brevipalpis 635 Edwardsiella 634503EDWI9Edwardsiella ictaluri (strain 93-146) 636 Edwardsiella tarda 498217EDWTEEdwardsiella tarda (strain EIB202) 718251EDWTFEdwardsiella tarda (strain FL6-60) 1903414 Morganellaceae 29487 Photorhabdus 553480PHOAAPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) 243265PHOLLPhotorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) 529507PROMHProteus mirabilis (strain HI4320) 586 Providencia 1141663PRORDProvidencia rettgeri (strain Dmel1)Proteus rettgeri 1157951PROSMProvidencia stuartii (strain MRSN 2154) 626 Xenorhabdus 406818XENBSXenorhabdus bovienii (strain SS-2004) 406817XENNAXenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) 1903410 Pectobacteriaceae 204037 Dickeya 561229DICC1Dickeya chrysanthemi (strain Ech1591) 198628DICD3Dickeya dadantii (strain 3937) 579405DICP7Dickeya paradisiaca (strain Ech703) 590409DICZ5Dickeya zeae (strain Ech586) 122277 Pectobacterium 218491PECASPectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)Erwinia carotovora subsp. atroseptica 561230PECCPPectobacterium carotovorum subsp. carotovorum (strain PC1) 1905730 Pectobacterium parmentieri 1905730PECPMPectobacterium parmentieri (disambiguate PECPM) 561231PECPWPectobacterium parmentieri (strain WPP163) 343509SODGMSodalis glossinidius (strain morsitans) 1903411 Yersiniaceae 34037 Rahnella 745277RAHACRahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) 741091RAHSYRahnella sp. (strain Y9602) 613 Serratia 47917SERFOSerratia fonticola 768492SERSASerratia plymuthica (strain AS9) 399741SERP5Serratia proteamaculans (strain 568) 629 Yersinia 630 Yersinia enterocolitica 393305YERE8Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) 150053 Yersinia enterocolitica subsp. palearctica 930944YERE1Yersinia enterocolitica subsp. palearctica serotype O:3 (strain DSM 13030 / CIP 106945 / Y11) 994476YERE3Yersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r)) 1649845 Yersinia pseudotuberculosis complex 632 Yersinia pestis 214092YERPEYersinia pestis (disambiguate YERPE) 637382YERPDYersinia pestis (strain D106004) 637385YERP1Yersinia pestis (strain D182038) 386656YERPPYersinia pestis (strain Pestoides F) 637386YERPZYersinia pestis (strain Z176003) 349746YERPGYersinia pestis bv. Antiqua (strain Angola) 360102YERPAYersinia pestis bv. Antiqua (strain Antiqua) 377628YERPNYersinia pestis bv. Antiqua (strain Nepal516) 547048YERPHYersinia pestis bv. Medievalis (strain Harbin 35) 633 Yersinia pseudotuberculosis 273123YERPSYersinia pseudotuberculosis serotype I (strain IP32953) 502801YERPBYersinia pseudotuberculosis serotype IB (strain PB1/+) 349747YERP3Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) 502800YERPYYersinia pseudotuberculosis serotype O:3 (strain YPIII) 29486YERRUYersinia ruckeri 118969 Legionellales 777 Coxiella burnetii 434923COXB2Coxiella burnetii (strain CbuG_Q212) 434924COXB1Coxiella burnetii (strain CbuK_Q154)Coxiella burnetii (strain Q154) 434922COXBNCoxiella burnetii (strain Dugway 5J108-111) 360115COXBRCoxiella burnetii (strain RSA 331 / Henzerling II) 227377COXBUCoxiella burnetii (strain RSA 493 / Nine Mile phase I) 444 Legionellaceae 445 Legionella 661367LEGLNLegionella longbeachae serogroup 1 (strain NSW150) 446 Legionella pneumophila 400673LEGPCLegionella pneumophila (strain Corby) 297245LEGPLLegionella pneumophila (strain Lens) 297246LEGPALegionella pneumophila (strain Paris) 423212LEGP2Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy) 272624LEGPHLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) 451TATMITatlockia micdadeiLegionella micdadei 403 Methylococcaceae 697282METTVMethylobacter tundripaludum (strain ATCC BAA-1195 / DSM 17260 / SV96) 243233METCAMethylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) 271065 Methylomicrobium alcaliphilum 271065METAAMethylomicrobium alcaliphilum (disambiguate METAA) 1091494META2Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) 857087METMMMethylomonas methanica (strain MC09) 135619 Oceanospirillales 59753 Alcanivorax 393595ALCBSAlcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) 930169ALCDBAlcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) 349521HAHCHHahella chejuensis (strain KCTC 2396) 28256 Halomonadaceae 387662CARRPCarsonella ruddii (strain PV) 290398CHRSDChromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) 768066HALEDHalomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) 523791KANKDKangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) 135620 Oceanospirillaceae 28253 Marinomonas 717774MARM1Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) 400668MARMSMarinomonas sp. (strain MWYL1) 207954NEPCENeptuniibacter caesariensis 712 Pasteurellaceae 713 Actinobacillus 715 Actinobacillus pleuropneumoniae 434271ACTPJActinobacillus pleuropneumoniae serotype 3 (strain JL03) 416269ACTP2Actinobacillus pleuropneumoniae serotype 5b (strain L20) 537457ACTP7Actinobacillus pleuropneumoniae serotype 7 (strain AP76) 339671ACTSZActinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / 130Z) 416916 Aggregatibacter 668336AGGADAggregatibacter actinomycetemcomitans serotype C (strain D11S-1) 634176AGGANAggregatibacter aphrophilus (strain NJ8700) 221988MANSMMannheimia succiniciproducens (strain MBEL55E) 1005058GALAUGallibacterium anatis (strain UMN179) 557723HAEPSHaemophilus parasuis serovar 5 (strain SH0165) 724 Haemophilus 233412HAEDUHaemophilus ducreyi (strain 35000HP / ATCC 700724) 727 Haemophilus influenzae 862964HAEI1Haemophilus influenzae (strain 10810) 281310HAEI8Haemophilus influenzae (strain 86-028NP) 71421HAEINHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) 374930HAEIEHaemophilus influenzae (strain PittEE) 374931HAEIGHaemophilus influenzae (strain PittGG) 262727HAEI2Haemophilus influenzae (strain R2846 / 12) 262728HAEI6Haemophilus influenzae (strain R2866) 862965HAEP3Haemophilus parainfluenzae (strain T3T1) 731 Histophilus somni 205914HAES1Haemophilus somnus (strain 129Pt)Haemophilus somnus 228400HISS2Histophilus somni (strain 2336)Haemophilus somnus 44283 Pasteurella multocida subsp. multocida 1132496PASMHPasteurella multocida (strain HN06) 272843PASMUPasteurella multocida (strain Pm70) 72274 Pseudomonadales 468 Moraxellaceae 469 Acinetobacter 62977ACIADAcinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) 909768 Acinetobacter calcoaceticus/baumannii complex 470 Acinetobacter baumannii 696749ACIB1Acinetobacter baumannii (strain 1656-2) 480119ACIB5Acinetobacter baumannii (strain AB0057) 557600ACIB3Acinetobacter baumannii (strain AB307-0294) 405416ACIBCAcinetobacter baumannii (strain ACICU) 400667ACIBTAcinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) 509173ACIBYAcinetobacter baumannii (strain AYE) 509170ACIBSAcinetobacter baumannii (strain SDF) 980514ACIBDAcinetobacter baumannii (strain TCDC-AB0715) 871585ACICPAcinetobacter calcoaceticus (strain PHEA-2) 436717ACISDAcinetobacter oleivorans (strain JCM 16667 / KCTC 23045 / DR1) 475 Moraxella 749219MORCRMoraxella catarrhalis (strain RH4) 478MORNOMoraxella nonliquefaciens 497 Psychrobacter 259536PSYA2Psychrobacter arcticus (strain DSM 17307 / 273-4) 335284PSYCKPsychrobacter cryohalolentis (strain K5) 349106PSYWFPsychrobacter sp. (strain PRwf-1) 135621 Pseudomonadaceae 322710AZOVDAzotobacter vinelandii (strain DJ / ATCC BAA-1303) 286 Pseudomonas 287 Pseudomonas aeruginosa 208964PSEAEPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 557722PSEA8Pseudomonas aeruginosa (strain LESB58) 381754PSEA7Pseudomonas aeruginosa (strain PA7) 208963PSEABPseudomonas aeruginosa (strain UCBPP-PA14) 46677PSEAAPseudomonas agarici 994484PSEBNPseudomonas brassicacearum (strain NFM421) 384676PSEE4Pseudomonas entomophila (strain L48) 294 Pseudomonas fluorescens 205922PSEPFPseudomonas fluorescens (strain Pf0-1) 216595PSEFSPseudomonas fluorescens (strain SBW25) 743720PSEF1Pseudomonas fulva (strain 12-X) 1301098PSEKBPseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) 300 Pseudomonas mendocina 1001585PSEMNPseudomonas mendocina (strain NK-01) 399739PSEMYPseudomonas mendocina (strain ymp) 220664PSEF5Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) 303 Pseudomonas putida 160488PSEPKPseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) 351746PSEP1Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) 931281PSEPBPseudomonas putida (strain BIRD-1) 76869PSEPGPseudomonas putida (strain GB-1) 390235PSEPWPseudomonas putida (strain W619) 264730PSE14Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) 316 Pseudomonas stutzeri 379731PSEU5Pseudomonas stutzeri (strain A1501) 96563PSEUTPseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) 205918PSEU2Pseudomonas syringae pv. syringae (strain B728a) 223283PSESMPseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) 72273 Thiotrichales 262 Francisella 1163389FRANTFrancisella noatunensis subsp. orientalis (strain Toba 04) 484022FRAP2Francisella philomiragia subsp. philomiragia (strain ATCC 25017) 263 Francisella tularensis 264 Francisella novicida 676032FRACNFrancisella cf. novicida (strain 3523) 984129FRACFFrancisella cf. novicida (strain Fx1) 401614FRATNFrancisella tularensis subsp. novicida (strain U112) 119857 Francisella tularensis subsp. holarctica 458234FRATFFrancisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) 376619FRATHFrancisella tularensis subsp. holarctica (strain LVS) 393011FRATOFrancisella tularensis subsp. holarctica (strain OSU18) 441952FRATMFrancisella tularensis subsp. mediasiatica (strain FSC147) 119856 Francisella tularensis subsp. tularensis 393115FRAT1Francisella tularensis subsp. tularensis (strain FSC 198) 510831FRATEFrancisella tularensis subsp. tularensis (strain NE061598) 177416FRATTFrancisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) 418136FRATWFrancisella tularensis subsp. tularensis (strain WY96-3418) 135616 Piscirickettsiaceae 385025CYCSPCycloclasticus sp. (strain P1) 28884 Hydrogenovibrio 317025HYDCUHydrogenovibrio crunogenus (strain XCL-2) 28885HYDMRHydrogenovibrio marinus 40222 Methylophaga 754477METFJMethylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) 754476METNJMethylophaga nitratireducenticrescens 717773THICAThiomicrospira cyclica (strain DSM 14477 / JCM 11371 / ALM1) 641 Vibrionaceae 511678 Aliivibrio 668 Aliivibrio fischeri 312309ALIF1Aliivibrio fischeri (strain ATCC 700601 / ES114) 388396ALIFMAliivibrio fischeri (strain MJ11) 316275ALISLAliivibrio salmonicida (strain LFI1238) 298386PHOPRPhotobacterium profundum (strain SS9)Photobacterium sp. (strain SS9) 662 Vibrio 882102VIBA7Vibrio anguillarum (strain ATCC 68554 / 775)Listonella anguillarum 150340VIBAEVibrio antiquarius (strain Ex25) 338187VIBCBVibrio campbellii (strain ATCC BAA-1116 / BB120) 666 Vibrio cholerae 127906 Vibrio cholerae O1 243277VIBCHVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) 593588VIBCJVibrio cholerae serotype O1 (strain MJ-1236) 345073VIBC3Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) 579112VIBCMVibrio cholerae serotype O1 (strain M66-2) 903510VIBFNVibrio furnissii (strain DSM 14383 / NCTC 11218 / VL 6966) 693VIBNEVibrio nereis 223926VIBPAVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) 701176VIBSNVibrio sp. (strain N418) 575788VIBTLVibrio tasmaniensis (strain LGP32) 672 Vibrio vulnificus 216895VIBVUVibrio vulnificus (strain CMCP6) 914127VIBVMVibrio vulnificus (strain MO6-24/O) 196600VIBVYVibrio vulnificus (strain YJ016) 135614 Xanthomonadales 767434FRAADFrateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370)Acetobacter aurantius 32033 Xanthomonadaceae 69LYSENLysobacter enzymogenes 83618 Pseudoxanthomonas 1045855PSEUPPseudoxanthomonas spadix (strain BD-a59) 743721PSEUUPseudoxanthomonas suwonensis (strain 11-1) 40324 Stenotrophomonas maltophilia 522373STRMKStenotrophomonas maltophilia (strain K279a) 391008STRM5Stenotrophomonas maltophilia (strain R551-3) 338 Xanthomonas 380358XANAPXanthomonas albilineans (strain GPE PC73 / CFBP 7063) 340 Xanthomonas campestris pv. campestris 314565XANC8Xanthomonas campestris pv. campestris (strain 8004) 190485XANCPXanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) 509169XANCBXanthomonas campestris pv. campestris (strain B100) 190486XANACXanthomonas axonopodis pv. citri (strain 306) 316273XANC5Xanthomonas campestris pv. vesicatoria (strain 85-10) 64187 Xanthomonas oryzae pv. oryzae 291331XANORXanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) 342109XANOMXanthomonas oryzae pv. oryzae (strain MAFF 311018) 360094XANOPXanthomonas oryzae pv. oryzae (strain PXO99A) 2371 Xylella fastidiosa 160492XYLFAXylella fastidiosa (strain 9a5c) 405440XYLFMXylella fastidiosa (strain M12) 405441XYLF2Xylella fastidiosa (strain M23) 183190XYLFTXylella fastidiosa (strain Temecula1 / ATCC 700964) 788929XYLFGXylella fastidiosa (strain GB514) 118884 unclassified Gammaproteobacteria 374463BAUCHBaumannia cicadellinicola subsp. Homalodisca coagulata 32036 sulfur-oxidizing symbionts 412965VESOHVesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) 413404RUTMCRuthia magnifica subsp. Calyptogena magnifica 1553900 Oligoflexia 862908HALMSHalobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) 264462BDEBABdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) 68525 delta/epsilon subdivisions 28221 Deltaproteobacteria 644282DESB2Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) 213118 Desulfobacterales 213119 Desulfobacteraceae 439235DESAADesulfatibacillum alkenivorans (strain AK-01) 177437DESAHDesulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) 651182DESTTDesulfobacula toluolica (strain DSM 7467 / Tol2) 96561DESOHDesulfococcus oleovorans (strain DSM 6200 / Hxd3) 213121 Desulfobulbaceae 577650DESPDDesulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) 1167006DESSDDesulfocapsa sulfexigens (strain DSM 10523 / SB164P1) 177439DESPSDesulfotalea psychrophila (strain LSv54 / DSM 12343) 589865DESATDesulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) 213115 Desulfovibrionales 485915DESRDDesulfohalobium retbaense (strain ATCC 49708 / DSM 5692 / JCM 16813 / HR100) 525897DESBDDesulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) 194924 Desulfovibrionaceae 872 Desulfovibrio 207559DESAGDesulfovibrio alaskensis (strain G20) 525146DESDADesulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) 573370DESMRDesulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) 526222DESADDesulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) 881 Desulfovibrio vulgaris 882DESVHDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303) 883DESVMDesulfovibrio vulgaris (strain Miyazaki F / DSM 19637) 573059DESVRDesulfovibrio vulgaris (strain RCH1) 391774DESVVDesulfovibrio vulgaris subsp. vulgaris (strain DP4) 363253LAWIPLawsonia intracellularis (strain PHE/MN1-00) 2035811 Pseudodesulfovibrio 643562PSEA9Pseudodesulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) 1322246PSEP2Pseudodesulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) 760142HIPMAHippea maritima (strain ATCC 700847 / DSM 10411 / MH2) 69541 Desulfuromonadales 18 Pelobacter 338963PELCDPelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1) 338966PELPDPelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1) 28231 Geobacter 404380GEOBBGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) 316067GEODFGeobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) 398767GEOLSGeobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) 269799GEOMGGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) 443143GEOS8Geobacter sp. (strain M18) 443144GEOSMGeobacter sp. (strain M21) 35554 Geobacter sulfurreducens 243231GEOSLGeobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) 663917GEOSKGeobacter sulfurreducens (strain DL-1 / KN400) 351605GEOURGeobacter uraniireducens (strain Rf4) 29 Myxococcales 80811 Cystobacterineae 161492 Anaeromyxobacter 161493 Anaeromyxobacter dehalogenans 455488ANAD2Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) 290397ANADEAnaeromyxobacter dehalogenans (strain 2CP-C) 404589ANADFAnaeromyxobacter sp. (strain Fw109-5) 447217ANASKAnaeromyxobacter sp. (strain K) 378806STIADStigmatella aurantiaca (strain DW4/3-1) 31 Myxococcaceae 1144275CORCMCorallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2)Myxococcus coralloides 32 Myxococcus 483219MYXFHMyxococcus fulvus (strain ATCC BAA-855 / HW-1) 1278073MYXSDMyxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) 246197MYXXDMyxococcus xanthus (strain DK 1622) 502025HALO1Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) 448385SORC5Sorangium cellulosum (strain So ce56) 213462 Syntrophobacterales 213468 Syntrophaceae 880072DESARDesulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) 706587DESTADesulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) 56780SYNASSyntrophus aciditrophicus (strain SB) 335543SYNFMSyntrophobacter fumaroxidans (strain DSM 10017 / MPOB) 29547 Epsilonproteobacteria 213849 Campylobacterales 72294 Campylobacteraceae 28196 Arcobacter 367737ARCB4Arcobacter butzleri (strain RM4018) 572480ARCNCArcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI)Campylobacter nitrofigilis 194 Campylobacter 360104CAMC1Campylobacter concisus (strain 13826) 360105CAMC5Campylobacter curvus (strain 525.92) 360106CAMFFCampylobacter fetus subsp. fetus (strain 82-40) 360107CAMHCCampylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) 197 Campylobacter jejuni 195099CAMJRCampylobacter jejuni (strain RM1221) 360109CAMJDCampylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) 32022 Campylobacter jejuni subsp. jejuni 567106CAMJICampylobacter jejuni subsp. jejuni (strain IA3902) 718271CAMJSCampylobacter jejuni subsp. jejuni (strain S3) 645464CAMJMCampylobacter jejuni subsp. jejuni serotype HS21 (strain M1 / 99/308) 757425CAMJCCampylobacter jejuni subsp. jejuni serotype HS:41 (strain ICDCCJ07001) 192222CAMJECampylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) 354242CAMJJCampylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) 407148CAMJ8Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) 306263CAMLRCampylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) 57665 Sulfurospirillum 760154SULBSSulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) 525898SULD5Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) 72293 Helicobacteraceae 209 Helicobacter 382638HELAHHelicobacter acinonychis (strain Sheeba) 1002804HELBCHelicobacter bizzozeronii (strain CIII-1) 1172562HELCPHelicobacter cinaedi (strain PAGU611) 936155HELFCHelicobacter felis (strain ATCC 49179 / NCTC 12436 / CS1) 235279HELHPHelicobacter hepaticus (strain ATCC 51449 / 3B1) 679897HELM1Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) 210 Helicobacter pylori 585535HELPFHelicobacter pylori (strain 35A) 290847HELP1Helicobacter pylori (strain 51) 684950HELP5Helicobacter pylori (strain 52) 869727HELP9Helicobacter pylori (strain 908) 85962HELPYHelicobacter pylori (strain ATCC 700392 / 26695) 592205HELPBHelicobacter pylori (strain B38) 693745HELP3Helicobacter pylori (strain B8) 765964HELPCHelicobacter pylori (strain Cuz20) 866344HELPIHelicobacter pylori (strain F16) 866345HELPKHelicobacter pylori (strain F30) 102608HELPLHelicobacter pylori (strain F32) 866346HELPQHelicobacter pylori (strain F57) 563041HELPGHelicobacter pylori (strain G27) 907240HELP4Helicobacter pylori (strain Gambia94/24) 357544HELPHHelicobacter pylori (strain HPAG1) 907238HELP7Helicobacter pylori (strain India7) 85963HELPJHelicobacter pylori (strain J99 / ATCC 700824)Campylobacter pylori J99 907237HELPRHelicobacter pylori (strain Lithuania75) 570508HELP2Helicobacter pylori (strain P12) 765963HELPPHelicobacter pylori (strain PeCan4) 765962HELPMHelicobacter pylori (strain SJM180) 512562HELPSHelicobacter pylori (strain Shi470) 637913HELPVHelicobacter pylori (strain v225d) 709032SULKYSulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) 202746 Sulfurimonas 563040SULAOSulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) 326298SULDNSulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) 273121WOLSUWolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) 749222NITSENitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) 598659NAUPANautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) 34035 unclassified Epsilonproteobacteria 387092NITSBNitratiruptor sp. (strain SB155-2) 387093SULNBSulfurovum sp. (strain NBC37-1) 203692 Spirochaetia 29521 Brachyspira 565034BRAHWBrachyspira hyodysenteriae (strain ATCC 49526 / WA1) 1045858BRAIPBrachyspira intermedia (strain ATCC 51140 / PWS/A) 526224BRAM5Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150)Serpulina murdochii 759914BRAP9Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000) 170 Leptospiraceae 171 Leptospira 145259 Leptospira biflexa serovar Patoc 456481LEPBPLeptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) 355278LEPBALeptospira biflexa serovar Patoc (strain Patoc 1 / Ames) 338217 Leptospira borgpetersenii serovar Hardjo-bovis 355277LEPBJLeptospira borgpetersenii serovar Hardjo-bovis (strain JB197) 355276LEPBLLeptospira borgpetersenii serovar Hardjo-bovis (strain L550) 173 Leptospira interrogans 267671LEPICLeptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) 57678 Leptospira interrogans serovar Lai 189518LEPINLeptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) 573825LEPIILeptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain IPAV) 869212TURPDTurneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H)Leptospira parva 136 Spirochaetales 1643685 Borreliaceae 138 Borrelia 1155096BORCABorrelia crocidurae (strain Achema) 412419BORDLBorrelia duttonii (strain Ly) 314723BORHDBorrelia hermsii (strain HS1 / DAH) 412418BORRABorrelia recurrentis (strain A1) 314724BORT9Borrelia turicatae (strain 91E135) 64895 Borreliella 390236BORAPBorrelia afzelii (strain PKo) 290434BORBPBorreliella bavariensis (strain ATCC BAA-2496 / DSM 23469 / PBi) 139 Borreliella burgdorferi 224326BORBUBorrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) 521007BORBNBorrelia burgdorferi (strain N40) 445985BORBZBorrelia burgdorferi (strain ZS7) 137 Spirochaetaceae 573413SEDSSSediminispirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) 399320 Sphaerochaeta 760011SPHCDSphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) 158189SPHGBSphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy)Spirochaeta sp. (strain Buddy) 158190SPHPGSphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) 146 Spirochaeta 889378SPIAZSpirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) 154 Spirochaeta thermophila 665571SPITDSpirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) 869211SPITZSpirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) 157 Treponema 545695TREAZTreponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) 906968TREBDTreponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) 744872TRECHTreponema caldarium (strain ATCC 51460 / DSM 7334 / H1)Spirochaeta caldaria 243275TREDETreponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) 160 Treponema pallidum 161 Treponema pallidum subsp. pallidum 243276TREPATreponema pallidum (strain Nichols) 666714TREPCTreponema pallidum subsp. pallidum (strain Chicago) 455434TREPSTreponema pallidum subsp. pallidum (strain SS14) 168 Treponema pallidum subsp. pertenue 491079TREPDTreponema pallidum subsp. pertenue (strain CDC2) 491078TREPMTreponema pallidum subsp. pertenue (strain Samoa D) 545776TREPUTreponema paraluiscuniculi (strain Cuniculi A) 545694TREPZTreponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) 869209TRES6Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) 649777 Synergistaceae 891968ACEMNAcetomicrobium mobile (strain ATCC BAA-54 / DSM 13181 / JCM 12221 / NGA) 572547AMICLAminobacterium colombiense (strain DSM 12261 / ALA-1) 525903THEASThermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) 580340THELDThermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) 31969 Mollicutes 2146 Acholeplasmataceae 441768ACHLIAcholeplasma laidlawii (strain PG-8A) 33926 Candidatus Phytoplasma 482235PHYMTPhytoplasma mali (strain AT) 85620 Candidatus Phytoplasma asteris 322098AYWBPAster yellows witches'-broom phytoplasma (strain AYWB) 262768ONYPEOnion yellows phytoplasma (strain OY-M) 59748PHYASPhytoplasma australiense 265311MESFLMesoplasma florum (strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1) 2092 Mycoplasmataceae 2093 Mycoplasma 1212765MYCHAMycoplasma haemolamae (strain Purdue) 2110 Mycoplasma agalactiae 347258MYCA6Mycoplasma agalactiae (strain 5632) 347257MYCAPMycoplasma agalactiae (strain PG2) 243272MYCA5Mycoplasma arthritidis (strain 158L3-1) 28903 Mycoplasma bovis 289397MYCBGMycoplasma bovis (strain ATCC 25523 / DSM 22781 / NCTC 10131 / PG45) 956483MYCBHMycoplasma bovis (strain Hubei-1) 340047MYCCTMycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) 572263MYCCRMycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147) 512564MYCCMMycoplasma crocodyli (strain ATCC 51981 / MP145) 1246955MYCC1Mycoplasma cynos (strain C142) 2115 Mycoplasma fermentans 496833MYCFPMycoplasma fermentans (strain ATCC 19989 / NBRC 14854 / NCTC 10117 / PG18) 637387MYCFJMycoplasma fermentans (strain JER) 943945MYCFMMycoplasma fermentans (strain M64) 2096 Mycoplasma gallisepticum 708616MYCGFMycoplasma gallisepticum (strain F) 233150 Mycoplasma gallisepticum str. R 710128MYCGHMycoplasma gallisepticum (strain R(high / passage 156)) 710127MYCGAMycoplasma gallisepticum (strain R(low / passage 15 / clone 2)) 243273MYCGEMycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) 1111676MYCHNMycoplasma haemocanis (strain Illinois) 29501 Mycoplasma haemofelis 941640MYCHLMycoplasma haemofelis (strain Langford 1) 859194MYCHIMycoplasma haemofelis (strain Ohio2) 347256MYCHPMycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21) 2099 Mycoplasma hyopneumoniae 907287MYCH1Mycoplasma hyopneumoniae (strain 168) 295358MYCH2Mycoplasma hyopneumoniae (strain 232) 262722MYCH7Mycoplasma hyopneumoniae (strain 7448) 262719MYCHJMycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) 2100 Mycoplasma hyorhinis 872331MYCHHMycoplasma hyorhinis (strain HUB-1) 936139MYCHMMycoplasma hyorhinis (strain MCLD) 2105 Mycoplasma leachii 866629MYCL9Mycoplasma leachii (strain 99/014/6) 880447MYCLGMycoplasma leachii (strain DSM 21131 / NCTC 10133 / N29 / PG50) 267748MYCMOMycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) 44101 Mycoplasma mycoides subsp. mycoides SC 865867MYCMGMycoplasma mycoides subsp. mycoides SC (strain Gladysdale) 272632MYCMSMycoplasma mycoides subsp. mycoides SC (strain PG1) 272633MYCPEMycoplasma penetrans (strain HF-2) 2104 Mycoplasma pneumoniae 722438MYCPBMycoplasma pneumoniae (strain ATCC 15531 / DSM 22911 / NBRC 14401 / NCTC 10119 / FH) 272634MYCPNMycoplasma pneumoniae (strain ATCC 29342 / M129) 272635MYCPUMycoplasma pulmonis (strain UAB CTIP) 743965MYCPKMycoplasma putrefaciens (strain ATCC 15718 / NCTC 10155 / C30 KS-1 / KS-1) 57372 Mycoplasma suis 768700MYCSLMycoplasma suis (strain Illinois) 708248MYCS3Mycoplasma suis (strain KI_3806) 262723MYCS5Mycoplasma synoviae (strain 53) 1197325MYCWMMycoplasma wenyonii (strain Massachusetts)Eperythrozoon wenyonii 2129 Ureaplasma 38504 Ureaplasma parvum serovar 3 505682UREP2Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) 273119UREPAUreaplasma parvum serovar 3 (strain ATCC 700970) 565575UREU1Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) 525904THET1Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) 188711 Thermodesulfobacteriaceae 667014THEIDThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) 795359THEGPThermodesulfobacterium geofontis (strain OPF15) 188708 Thermotogae 521045KOSOTKosmotoga olearia (strain ATCC BAA-1733 / DSM 21960 / TBF 19.5.1) 1643949 Petrotogaceae 1006576DEFTUDefluviitoga tunisiensis 443254MARPKMarinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) 403833PETMOPetrotoga mobilis (strain DSM 10674 / SJ95) 2419 Thermotogales 1643950 Fervidobacteriaceae 2422 Fervidobacterium 381764FERNBFervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) 771875FERPDFervidobacterium pennivorans (strain DSM 9078 / Ven5) 2420 Thermosipho 484019THEABThermosipho africanus (strain TCF52B) 391009THEM4Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429) 188709 Thermotogaceae 416591PSELTPseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) 2335 Thermotoga 243274THEMAThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) 590168THENRThermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) 309803THENNThermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) 390874THEP1Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) 126740THESQThermotoga sp. (strain RQ2) 74201 Verrucomicrobia 481448METI4Methylacidiphilum infernorum (isolate V4) 414999 Opitutae 452637OPITPOpitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1) 583355CORADCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) 48461 Verrucomicrobiales 349741AKKM8Akkermansia muciniphila (strain ATCC BAA-835 / Muc) 320771PEDPLPedosphaera parvula (strain Ellin514) 1619019YANXGYanofskybacteria sp. (strain GW2011_GWA1_39_13) 2759 Eukaryota 33630 Alveolata 5794 Apicomplexa 422676 Aconoidasida 5820 Plasmodium 5833 Plasmodium falciparum 36329PLAF7Plasmodium falciparum (isolate 3D7) 57267PLAF4Plasmodium falciparum (isolate Dd2) 5843PLAFOPlasmodium falciparum (isolate NF54) 57270PLAFPPlasmodium falciparum (isolate Palo Alto / Uganda) 418103 Plasmodium (Plasmodium) 5857PLAFRPlasmodium fragile 5851PLAKHPlasmodium knowlesi (strain H) 5858PLAMAPlasmodium malariae 126793PLAVSPlasmodium vivax (strain Salvador I) 418101 Plasmodium (Vinckeia) 5823PLABAPlasmodium berghei (strain Anka) 73239PLAYOPlasmodium yoelii yoelii 5863 Piroplasmida 5864 Babesia 5866BABBIBabesia bigemina 5865BABBOBabesia bovis 1133968BABMRBabesia microti (strain RI) 5873 Theileria 5874THEANTheileria annulata 5875THEPATheileria parvaEast coast fever infection agent 1280412 Conoidasida 423054 Eimeriorina 5806 Cryptosporidium 441375CRYMRCryptosporidium muris (strain RN66) 5807 Cryptosporidium parvum 5807CRYPVCryptosporidium parvum (disambiguate CRYPV) 353152CRYPICryptosporidium parvum (strain Iowa II) 5800 Eimeria 5801EIMACEimeria acervulinaCoccidian parasite 5804EIMMAEimeria maximaCoccidian parasite 5802EIMTEEimeria tenellaCoccidian parasite 5809 Sarcocystidae 99158HAMHAHammondia hammondiParasitic protozoan 5811 Toxoplasma gondii 5811TOXGOToxoplasma gondii (disambiguate TOXGO) 432359TOXGVToxoplasma gondii (strain ATCC 50861 / VEG) 110365GRENIGregarina niphandrodesSeptate eugregarine 431838 Intramacronucleata 6020 Oligohymenophorea 31277 Hymenostomatida 5932 Ichthyophthirius multifiliis 5932ICHMUIchthyophthirius multifiliis (disambiguate ICHMU)White spot disease agentIch 857967ICHMGIchthyophthirius multifiliis (strain G5)White spot disease agentIch 312017TETTSTetrahymena thermophila (strain SB210) 5888PARTEParamecium tetraurelia 266149PSEPJPseudocohnilembus persalinusCiliate 5949STYLEStylonychia lemnaeCiliate 1169540VITBCVitrella brassicaformis (strain CCMP3155) 423536PERM5Perkinsus marinus (strain ATCC 50983 / TXsc) 2605435 Evosea 5758 Entamoeba 370354ENTDSEntamoeba dispar (strain ATCC PRA-260 / SAW760) 5759ENTHIEntamoeba histolytica 1076696ENTNPEntamoeba nuttalli (strain P19)Amoeba 33083 Dictyostelids 2058181 Acytosteliales 670386POLPPPolysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) 1054147CAVFACavenderia fasciculata (strain SH3)Slime moldDictyostelium fasciculatum 5782 Dictyostelium 44689DICDIDictyostelium discoideumSlime mold 5786DICPUDictyostelium purpureumSlime mold 55529GUITHGuillardia thetaCryptomonas phi 5653 Kinetoplastida 75058BODSABodo saltansFlagellated protozoan 5654 Trypanosomatidae 1286322 Leishmaniinae 38568 Leishmania 38574 Leishmania donovani species complex 981087LEIDBLeishmania donovani (strain BPK282A1) 5671LEIINLeishmania infantum 347515LEIMALeishmania major 929439LEIMULeishmania mexicana (strain MHOM/GT/2001/U1103) 5660LEIBRLeishmania braziliensis 5684LEPSELeptomonas seymouri 5690 Trypanosoma 1055687TRYVYTrypanosoma vivax (strain Y486) 1068625TRYCITrypanosoma congolense (strain IL3000) 353153TRYCCTrypanosoma cruzi (strain CL Brener) 185431TRYB2Trypanosoma brucei brucei (strain 927/4 GUTat10.1) 5741 Giardia intestinalis 598745GIAIBGiardia intestinalis (strain ATCC 50581 / GS clone H7)Giardia lamblia 184922GIAICGiardia intestinalis (strain ATCC 50803 / WB clone C6)Giardia lamblia 658858GIAIAGiardia intestinalis (strain P15)Giardia lamblia 280463EMIHUEmiliania huxleyi 744533NAEGRNaegleria gruberiAmoeba 33154 Opisthokonta 81529 Salpingoecidae 81824MONBEMonosiga brevicollis 946362SALR5Salpingoeca rosetta (strain ATCC 50818 / BSB-021) 691883FONALFonticula albaSlime mold 4751 Fungi 451864 Dikarya 4890 Ascomycota 451866 Taphrinomycotina 4895 Schizosaccharomyces 653667SCHCRSchizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691)Fission yeast 402676SCHJYSchizosaccharomyces japonicus (strain yFS275 / FY16936)Fission yeast 483514SCHOYSchizosaccharomyces octosporus (strain yFS286)Fission yeastOctosporomyces octosporus 284812SCHPOSchizosaccharomyces pombe (strain 972 / ATCC 24843)Fission yeast 698492SAICNSaitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) 716545 saccharomyceta 147538 Pezizomycotina 756982ARTOAArthrobotrys oligospora (strain ATCC 24927 / CBS 115.81 / DSM 1491)Nematode-trapping fungusDidymozoophaga oligospora 5185 Pezizales 1076935PYROMPyronema omphalodes (strain CBS 100304)Pyronema confluens 656061TUBMMTuber melanosporum (strain Mel28)Perigord black truffle 716546 leotiomyceta 451871 Eurotiomycetidae 5042 Eurotiales 1131492 Aspergillaceae 5052 Aspergillus 5053ASPACAspergillus aculeatus 344612ASPCLAspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) 331117NEOFINeosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181)Aspergillus fischerianus 332952ASPFNAspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) 41413ASPGLAspergillus glaucusAspergillus glaucus 510516ASPORAspergillus oryzae (strain ATCC 42149 / RIB 40)Yellow koji mold 341663ASPTNAspergillus terreus (strain NIH 2624 / FGSC A1156) 162425 Emericella nidulans 162425EMENDEmericella nidulans (disambiguate EMEND)Aspergillus nidulans 227321EMENIEmericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)Aspergillus nidulans 330879ASPFUNeosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)Aspergillus fumigatus 5073 Penicillium 254878 Penicillium chrysogenum species complex 5076PENCHPenicillium chrysogenumPenicillium notatum 500485PENRWPenicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255)Penicillium notatum 40296PENITPenicillium italicumBlue mold 441959TALSNTalaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) 33183 Onygenales 663331ARTBCArthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371)Trichophyton mentagrophytes 1593277 Onygenales incertae sedis 246410COCIMCoccidioides immitis (strain RS)Valley fever fungus 502779PARBAParacoccidioides lutzii (strain ATCC MYA-826 / Pb01)Paracoccidioides brasiliensis 147541 Dothideomycetes 1168221CONA1Coniosporium apollinis (strain CBS 100218)Rock-inhabiting black yeast 451867 Dothideomycetidae 93133 Mycosphaerellaceae 675120DOTSNDothistroma septosporum (strain NZE10 / CBS 128990)Red band needle blight fungusMycosphaerella pini 5499PASFUPassalora fulvaTomato leaf moldCladosporium fulvum 692275SPHMSSphaerulina musiva (strain SO2202)Poplar stem canker fungusSeptoria musiva 1047171ZYMTRZymoseptoria triticiSpeckled leaf blotch fungusSeptoria tritici 5580AURPUAureobasidium pullulansBlack yeastPullularia pullulans 715340 Pleosporineae 985895LEPMJLeptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8)Blackleg fungusPhoma lingam 13684 Phaeosphaeria nodorum 13684PHANDPhaeosphaeria nodorum (disambiguate PHAND)Glume blotch fungusSeptoria nodorum 321614PHANOPhaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)Stagonospora nodorum 28556 Pleosporaceae 665912COCSNCochliobolus sativus (strain ND90Pr / ATCC 201652)Common root rot and spot blotch fungusBipolaris sorokiniana 5503COCLUCochliobolus lunatusFilamentous fungusCurvularia lunata 426418PYRTRPyrenophora tritici-repentis (strain Pt-1C-BFP)Wheat tan spot fungusDrechslera tritici-repentis 715989 sordariomyceta 147548 Leotiomycetes 34373BLUGRBlumeria graminisPowdery mildewOidium monilioides 28983 Sclerotiniaceae 332648BOTFBBotryotinia fuckeliana (strain B05.10)Botryotinia fuckeliana 665079SCLS1Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)White moldWhetzelinia sclerotiorum 147550 Sordariomycetes 222543 Hypocreomycetidae 1028384 Glomerellales 5455 Colletotrichum 31870COLGRColletotrichum graminicolaMaize anthracnose fungusGlomerella graminicola 1173701COLSUColletotrichum sublineolaSorghum anthracnose fungus 27337 Verticillium dahliae 27337VERDAVerticillium dahliae (disambiguate VERDA)Verticillium wilt 498257VERDVVerticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137)Verticillium wilt 5125 Hypocreales 474943 Cordycipitaceae 176275BEABABeauveria bassianaWhite muscardine disease fungusTritirachium shiotae 983644CORMMCordyceps militaris (strain CM01)Caterpillar fungus 5543 Trichoderma 452589HYPAIHypocrea atroviridis (strain ATCC 20476 / IMI 206040)Trichoderma atroviride 51453HYPJEHypocrea jecorinaTrichoderma reesei 413071HYPVGHypocrea virens (strain Gv29-8 / FGSC 10586)Gliocladium virensTrichoderma virens 5544TRIHATrichoderma harzianumHypocrea lixii 5506 Fusarium 334819GIBM7Gibberella moniliformis (strain M3125 / FGSC 7600)Maize ear and stalk rot fungusFusarium verticillioides 5507 Fusarium oxysporum 1229664FUSC1Fusarium oxysporum f. sp. cubense (strain race 1)Panama disease fungus 426428FUSO4Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)Fusarium vascular wilt of tomato 5518GIBZAGibberella zeaeWheat head blight fungusFusarium graminearum 140110NECHANectria haematococca 222544 Sordariomycetidae 5116CRYPACryphonectria parasiticaChesnut blight fungusEndothia parasitica 639021 Magnaporthales 644358MAGP6Magnaporthiopsis poae (strain ATCC 64411 / 73-15)Kentucky bluegrass fungusMagnaporthe poae 48558 Pyricularia 148305MAGGRMagnaporthe grisearice blast fungus 242507MAGO7Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)Rice blast fungusPyricularia oryzae 5139 Sordariales 78579THIHEThielavia heterothallicaMyceliophthora thermophila 5140 Neurospora 367110NEUCRNeurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) 510952NEUT9Neurospora tetrasperma (strain FGSC 2509 / P0656) 37989 Xylariales 1287681EUTLAEutypa lata (strain UCR-EL1)Grapevine dieback disease fungusEutypa armeniacae 1229662PESFWPestalotiopsis fici (strain W106-1 / CGMCC3.15140) 4892 Saccharomycetales 766764 Debaryomycetaceae 1535325 Candida/Lodderomyces clade 5476 Candida albicans 237561CANALCandida albicans (strain SC5314 / ATCC MYA-2876)Yeast 294748CANAWCandida albicans (strain WO-1) 379508LODELLodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) 284592DEBHADebaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)Torulaspora hansenii 294746PICGUMeyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)YeastCandida guilliermondii 559304PICSOPichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695)Hybrid yeast 322104PICSTScheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) 619300SPAPNSpathaspora passalidarum (strain NRRL Y-27907 / 11-Y1) 2315449CANTECandida tenuisYeast 284591YARLIYarrowia lipolytica (strain CLIB 122 / E 150)YeastCandida lipolytica 115784 Phaffomycetaceae 604195 Cyberlindnera 36022CYBFACyberlindnera fabianiiYeastHansenula fabianii 983966CYBJNCyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / CCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542)Torula yeastCandida utilis 644223KOMPGKomagataella phaffii (strain GS115 / ATCC 20864)YeastPichia pastoris 1156497 Pichiaceae 5007DEKBRDekkera bruxellensisBrettanomyces custersii 871575OGAPDOgataea parapolymorpha (strain ATCC 26012 / BCRC 20466 / JCM 22074 / NRRL Y-7560 / DL-1)YeastHansenula polymorpha 4893 Saccharomycetaceae 284811ASHGOAshbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)YeastEremothecium gossypii 1071383KAZNAKazachstania naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082)YeastSaccharomyces naganishii 284590KLULAKluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)Yeast 559295LACTCLachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284)YeastKluyveromyces thermotolerans 284593CANGACandida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)YeastTorulopsis glabrata 4932 Saccharomyces cerevisiae 559292YEASTSaccharomyces cerevisiae (strain ATCC 204508 / S288c)Baker's yeast 764097YEASASaccharomyces cerevisiae (strain AWRI796)Baker's yeast 764101YEASOSaccharomyces cerevisiae (strain FostersO)Baker's yeast 764099YEASVSaccharomyces cerevisiae (strain VIN 13)Baker's yeast 436907VANPOVanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294)Kluyveromyces polysporus 4956ZYGROZygosaccharomyces rouxiiCandida mogii 5204 Basidiomycota 5302 Agaricomycotina 155619 Agaricomycetes 355688 Agaricomycetes incertae sedis 717982AURSTAuricularia subglabra (strain TFB-10046 / SS5)White-rot fungus 741275PUNSTPunctularia strigosozonata (strain HHB-11173)White-rot fungus 104355GLOTRGloeophyllum trabeumBrown rot fungus 694068FOMMEFomitiporia mediterranea (strain MF3/22)Grapevine white-rot fungus 5303 Polyporales 561896POSPMPostia placenta (strain ATCC 44394 / Madison 698-R)Brown rot fungusPoria monticola 743788FOMPIFomitopsis pinicola (strain FP-58527)Brown rot fungus 5627GRIFRGrifola frondosaMaitakePolyporus frondosus 742152WOLCOWolfiporia cocos (strain MD-104)Brown rot fungus 396331 Phanerochaetaceae 5306PHACHPhanerochaete chrysosporiumWhite-rot fungusSporotrichum pruinosum 82310PHLGIPhlebiopsis giganteaWhite-rot fungusPeniophora gigantea 5317 Polyporaceae 732165DICSQDichomitus squalens (strain LYAD-421)Western red white-rot fungus 717944TRAVSTrametes versicolor (strain FP-101664)White-rot fungusCoriolus versicolor 452342 Russulales 13563HETANHeterobasidion annosumRoot rot fungus 721885STEHRStereum hirsutum (strain FP-91666)White-rot fungus 1109443SERIDSerendipita indica (strain DSM 11827) 452333 Agaricomycetidae 5338 Agaricales 192523AGABIAgaricus bisporusCommon mushroom 554373MONPEMoniliophthora perniciosa (strain FA553 / isolate CP02)Witches'-broom disease fungusMarasmius perniciosus 5346 Coprinopsis cinerea 5346COPCICoprinopsis cinerea (disambiguate COPCI)Inky cap fungusHormographiella aspergillata 240176COPC7Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)Inky cap fungusHormographiella aspergillata 5334SCHCOSchizophyllum communeSplit gill fungus 29883LACBILaccaria bicolor 741705CONPWConiophora puteana (strain RWD-64-598)Brown rot fungus 5234 Tremellales 5206 Cryptococcus 1884637 Cryptococcus gattii species complex 552467CRYGACryptococcus gattiiCryptococcus neoformans serotype B 294750CRYGRCryptococcus gattii serotype B (strain R265)Filobasidiella gattiiCryptococcus bacillisporus 214684CRYNJCryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565)Filobasidiella neoformans 5217TREMETremella mesentericaJelly fungus 29000 Pucciniomycotina 162481 Microbotryomycetes 683840USTV1Microbotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064)Anther smut fungus 578459RHOGWRhodotorula graminis (strain WP1) 764103MIXOSMixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) 5297 Puccinia graminis 5297PUCGRPuccinia graminis (disambiguate PUCGR)Black stem rust fungus 418459PUCGTPuccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL)Black rust 452284 Ustilaginomycotina 425265MALGOMalassezia globosa (strain ATCC MYA-4612 / CBS 7966)Dandruff-associated fungus 5269 Ustilago 120017USTHOUstilago hordeiBarley covered smut fungus 237631USTMAUstilago maydis (strain 521 / FGSC 9021) 148959 Wallemia 1299270WALI9Wallemia ichthyophaga (strain EXF-994 / CBS 113033) 148960WALSEWallemia sebi 112252 Fungi incertae sedis 451435 Chytridiomycetes 109871 Batrachochytrium dendrobatidis 109871BATDEBatrachochytrium dendrobatidis (disambiguate BATDE)Frog chytrid fungus 684364BATDJBatrachochytrium dendrobatidis (strain JAM81 / FGSC 10211)Frog chytrid fungus 109760SPIPNSpizellomyces punctatus 6029 Microsporidia 6032 Apansporoblastina 578460NOSCENosema ceranae (strain BRL01)Microsporidian parasite 284813ENCCUEncephalitozoon cuniculi (strain GB-M1) 948595VAVCUVavraia culicis (isolate floridensis)Microsporidian parasite 4827 Mucorales 1344963 Mucorineae 36080MUCCIMucor circinelloidesMucor griseo-roseus 64495RHIORRhizopus oryzaeMucormycosis agent 4837PHYBLPhycomyces blakesleeanus 33208 Metazoa 6072 Eumetazoa 33213 Bilateria 33511 Deuterostomia 7711 Chordata 7737 Branchiostoma 7739BRAFLBranchiostoma floridaeLancelet 7740BRALABranchiostoma lanceolatumCommon lanceletAmphioxus lanceolatum 7742 Vertebrata 1476529 Cyclostomata 7757PETMAPetromyzon marinusSea lamprey 7764EPTBUEptatretus burgeriInshore hagfish 117571 Euteleostomi 41665 Neopterygii 7918LEPOCLepisosteus oculatusSpotted gar 186625 Clupeocephala 1489388 Euteleosteomorpha 123368 Acanthomorphata 1489872 Percomorphaceae 64144ANATEAnabas testudineusClimbing perchAnthias testudineus 1489904 Carangaria 41447SERDUSeriola dumeriliMediterranean greater amberjackCaranx dumerili 30942 Pleuronectoidei 244447CYNSECynoglossus semilaevisTongue sole 52904SCOMXScophthalmus maximusTurbotPsetta maxima 1489922 Eupercaria 69293GASACGasterosteus aculeatusThree-spined stickleback 31031 Tetraodontidae 31033TAKRUTakifugu rubripesJapanese pufferfishFugu rubripes 99883TETNGTetraodon nigroviridisSpotted green pufferfishChelonodon nigroviridis 1489908 Ovalentaria 1489913 Atherinomorphae 8089 Oryzias 8090ORYLAOryzias latipesMedaka fishJapanese ricefish 30732ORYMEOryzias melastigmaMarine medaka 28738 Cyprinodontiformes 105023NOTFUNothobranchius furzeriTurquoise killifish 8087 Cyprinodontoidei 28743CYPVACyprinodon variegatusSheepshead minnow 586240 Poeciliinae 48698POEFOPoecilia formosaAmazon mollyLimia formosa 8083XIPMAXiphophorus maculatusSouthern platyfishPlatypoecilus maculatus 318546 Pseudocrenilabrinae 8153HAPBUHaplochromis burtoniBurton's mouthbrooderChromis burtoni 32507NEOBRNeolamprologus brichardiFairy cichlidLamprologus brichardi 8128ORENIOreochromis niloticusNile tilapiaTilapia nilotica 80972AMPOCAmphiprion ocellarisClown anemonefish 109280HIPCMHippocampus comesTiger tail seahorse 8049GADMOGadus morhuaAtlantic cod 8010ESOLUEsox luciusNorthern pike 186626 Otophysi 186628 Characiphysae 1489739 Characoidei 7994ASTMXAstyanax mexicanusBlind cave fishAstyanax fasciatus mexicanus 42514PYGNAPygocentrus nattereriRed-bellied piranha 7998ICTPUIctalurus punctatusChannel catfishSilurus punctatus 7955DANREDanio rerioZebrafishBrachydanio rerio 8287 Sarcopterygii 7897LATCHLatimeria chalumnaeWest Indian ocean coelacanth 32523 Tetrapoda 32524 Amniota 40674 Mammalia 9258ORNANOrnithorhynchus anatinusPlatypus 32525 Theria 9347 Eutheria 311790 Afrotheria 9813PROCAProcavia capensisCape hyraxRock dassie 9785LOXAFLoxodonta africanaAfrican elephant 9371ECHTEEchinops telfairiLesser hedgehog tenrec 1437010 Boreoeutheria 314146 Euarchontoglires 314147 Glires 9975 Lagomorpha 9986RABITOryctolagus cuniculusRabbit 9978OCHPROchotona princepsSouthern American pika 9989 Rodentia 10020DIPORDipodomys ordiiOrd's kangaroo rat 33550 Hystricomorpha 10167 Bathyergidae 885580FUKDAFukomys damarensisDamaraland mole ratCryptomys damarensis 10181HETGAHeterocephalus glaberNaked mole rat 10140 Cavia 37548CAVAPCavia apereaBrazilian guinea pig 10141CAVPOCavia porcellusGuinea pig 34839CHILAChinchilla lanigeraLong-tailed chinchillaChinchilla villidera 10160OCTDEOctodon degusDeguSciurus degus 1963758 Myomorpha 51337JACJAJaculus jaculusLesser Egyptian jerboa 337687 Muroidea 10029CRIGRCricetulus griseusChinese hamsterCricetulus barabensis griseus 39107 Murinae 10090MOUSEMus musculusMouse 10116RATNORattus norvegicusRat 1026970NANGANannospalax galiliNorthern Israeli blind subterranean mole ratSpalax galili 43179ICTTRIctidomys tridecemlineatusSquirrelIctidomys tridecemlineatus 9443 Primates 376913 Haplorrhini 314293 Simiiformes 9526 Catarrhini 9527 Cercopithecidae 9528 Cercopithecinae 9531CERATCercocebus atysSooty mangabeyCercocebus torquatus atys 60711CHLSBChlorocebus sabaeusGreen monkeyCercopithecus sabaeus 9539 Macaca 9541MACFAMacaca fascicularisCrab-eating macaqueCynomolgus monkey 9544MACMUMacaca mulattaRhesus macaque 9545MACNEMacaca nemestrinaPig-tailed macaque 9568MANLEMandrillus leucophaeusDrillPapio leucophaeus 9555PAPANPapio anubisOlive baboon 9569 Colobinae 336983COLAPColobus angolensis palliatusPeters' Angolan colobus 542827 Rhinopithecus 61621RHIBERhinopithecus bietiBlack snub-nosed monkeyPygathrix bieti 61622RHIRORhinopithecus roxellanaGolden snub-nosed monkeyPygathrix roxellana 314295 Hominoidea 9604 Hominidae 207598 Homininae 9595GORGOGorilla gorilla gorillaLowland gorilla 9606HUMANHomo sapiensHuman 9596 Pan 9597PANPAPan paniscusPygmy chimpanzeeBonobo 9598PANTRPan troglodytesChimpanzee 9601PONABPongo abeliiSumatran orangutanPongo pygmaeus abelii 61853NOMLENomascus leucogenysNorthern white-cheeked gibbonHylobates leucogenys 9479 Platyrrhini 37293AOTNAAotus nancymaaeMa's night monkey 9498 Cebidae 9483CALJACallithrix jacchusWhite-tufted-ear marmoset 39432SAIBBSaimiri boliviensis boliviensisBolivian squirrel monkey 1868482TARSYTarsius syrichtaPhilippine tarsier 376911 Strepsirrhini 376915 Lemuriformes 30608MICMUMicrocebus murinusLesser mouse lemur 379532PROCOPropithecus coquereliCoquerel's sifakaPropithecus verreauxi coquereli 30611OTOGAOtolemur garnettiiSmall-eared galagoGarnett's greater bushbaby 37347TUPBETupaia belangeriCommon tree shrewTupaia glis belangeri 314145 Laurasiatheria 33554 Carnivora 379584 Caniformia 9608 Canidae 9615CANLFCanis lupus familiarisDogCanis lupus familiaris 9627VULVUVulpes vulpesRed fox 9669MUSPFMustela putorius furoEuropean domestic ferretMustela furo 9632 Ursidae 9646AILMEAiluropoda melanoleucaGiant panda 9639 Ursus 9643URSAMUrsus americanusAmerican black bearEuarctos americanus 29073URSMAUrsus maritimusPolar bearThalarctos maritimus 9685FELCAFelis catusCatFelis silvestris catus 91561 Cetartiodactyla 9739TURTRTursiops truncatusAtlantic bottle-nosed dolphinDelphinus truncatus 9895 Bovidae 9913BOVINBos taurusBovine 9963 Caprinae 9925CAPHICapra hircusGoat 9940SHEEPOvis ariesSheep 9823PIGXXSus scrofaPig 30538VICPAVicugna pacosAlpacaLama pacos 9397 Chiroptera 132908PTEVAPteropus vampyrusLarge flying fox 59463MYOLUMyotis lucifugusLittle brown bat 9362 Eulipotyphla 9365ERIEUErinaceus europaeusWestern European hedgehog 42254SORARSorex araneusEurasian common shrewEuropean shrew 9789 Equus 83772EQUASEquus asinus 9796HORSEEquus caballusHorse 9348 Xenarthra 9361DASNODasypus novemcinctusNine-banded armadillo 9358CHOHOCholoepus hoffmanniHoffmann's two-fingered sloth 9263 Metatheria 9305SARHASarcophilus harrisiiTasmanian devilSarcophilus laniarius 13616MONDOMonodelphis domesticaGray short-tailed opossum 38609 Diprotodontia 9315MACEUMacropus eugeniiTammar wallaby 38626PHACIPhascolarctos cinereusKoala 32561 Sauria 1329799 Archelosauria 8825 Neognathae 1549675 Galloanserae 8839ANAPLAnas platyrhynchosDomestic duckAnas boschas 9005 Phasianidae 9103MELGAMeleagris gallopavoCommon turkey 9031CHICKGallus gallusChicken 9126 Passeriformes 59894FICALFicedula albicollisCollared flycatcherMuscicapa albicollis 9157PARMJParus majorGreat tit 40217JUNHYJunco hyemalisDark-eyed junco 175121 Passeroidea 59729TAEGUTaeniopygia guttataZebra finchPoephila guttata 9135SERCASerinus canariaIsland canaryFringilla canaria 13146MELUDMelopsittacus undulatusBudgerigarPsittacus undulatus 8464 Cryptodira 8486 Testudinoidea 8478CHRPIChrysemys picta belliiWestern painted turtleEmys bellii 106734CHEABChelonoidis abingdoniiAbingdon island giant tortoiseTestudo abingdonii 13735PELSIPelodiscus sinensisChinese softshell turtleTrionyx sinensis 8504 Lepidosauria 8508SPHPUSphenodon punctatusTuataraHatteria punctata 28377ANOCAAnolis carolinensisGreen anoleAmerican chameleon 8353 Xenopus 8364XENTRXenopus tropicalisWestern clawed frogSilurana tropicalis 8355XENLAXenopus laevisAfrican clawed frog 7718 Ciona 7719CIOINCiona intestinalisTransparent sea squirtAscidia intestinalis 51511CIOSACiona savignyiPacific transparent sea squirt 7668STRPUStrongylocentrotus purpuratusPurple sea urchin 6157 Platyhelminthes 79327SCHMDSchmidtea mediterraneaFreshwater planarian flatworm 6183SCHMASchistosoma mansoni 33317 Protostomia 1206794 Ecdysozoa 6231 Nematoda 6236 Rhabditida 2301116 Rhabditina 54126PRIPAPristionchus pacificusNematode 6237 Caenorhabditis 135651CAEBECaenorhabditis brenneri 6238CAEBRCaenorhabditis briggsae 6239CAEELCaenorhabditis elegans 281687CAEJACaenorhabditis japonicaNematode 31234CAERECaenorhabditis remanei 2072716 Spiruromorpha 6296 Onchocercidae 6279BRUMABrugia malayiFilarial nematode worm 7209LOALOLoa loaEye wormFilaria loa 6282ONCVOOnchocerca volvulus 103827THECLThelazia callipaedaOriental eyewormParasitic nematode 6300 Tylenchina 34506STRRBStrongyloides rattiParasitic roundworm 6305MELHAMeloidogyne haplaRoot-knot nematode worm 6334TRISPTrichinella spiralisTrichina worm 88770 Panarthropoda 6656 Arthropoda 6933 Acari 6946 Acariformes 52283SARSCSarcoptes scabieiItch miteAcarus scabiei 32264TETURTetranychus urticaeTwo-spotted spider mite 6945IXOSCIxodes scapularisTick 197563 Mandibulata 126957STRMMStrigamia maritimaEuropean centipedeGeophilus maritimus 197562 Pancrustacea 6657 Crustacea 6669DAPPUDaphnia pulexWater flea 72036LEPSMLepeophtheirus salmonisSalmon louse 6960 Hexapoda 730330 Entomobryomorpha 48709ORCCIOrchesella cinctaSpringtail 158441FOLCAFolsomia candidaSpringtail 33340 Neoptera 33392 Holometabola 104431 Obtectomera 7091BOMMOBombyx moriSilkworm 33415 Nymphalidae 13037DANPLDanaus plexippusMonarch butterfly 34740HELMEHeliconius melpomenePostman butterfly 113334MELCNMelitaea cinxiaGlanville fritillaryPapilio cinxia 41088 Cucujiformia 77166DENPDDendroctonus ponderosaeMountain pine beetle 7070TRICATribolium castaneumRed flour beetle 7147 Diptera 480117 Cyclorrhapha 36166MEGSCMegaselia scalarisHumpbacked flyPhora scalaris 43738 Schizophora 7215 Drosophila 7222DROGRDrosophila grimshawiFruit flyIdiomyia grimshawi 32341 Sophophora 32346 melanogaster group 32347 ananassae subgroup 7217DROANDrosophila ananassaeFruit fly 42026DROBPDrosophila bipectinataFruit fly 30023DROELDrosophila elegansFruit fly 29029DROEUDrosophila eugracilisFruit fly 30025DROFCDrosophila ficusphilaFruit fly 32351 melanogaster subgroup 7220DROERDrosophila erectaFruit fly 7227DROMEDrosophila melanogasterFruit fly 7238DROSEDrosophila sechelliaFruit fly 7240DROSIDrosophila simulansFruit fly 7245DROYADrosophila yakubaFruit fly 30033DROKIDrosophila kikkawaiFruit fly 1041015DRORHDrosophila rhopaloaFruit fly 125945DROBMDrosophila biarmipesFruit fly 29030DROTKDrosophila takahashiiFruit fly 32358 pseudoobscura subgroup 7234DROPEDrosophila persimilisFruit fly 46245DROPSDrosophila pseudoobscura pseudoobscuraFruit fly 7260DROWIDrosophila willistoni 7230DROMODrosophila mojavensisFruit fly 7244DROVIDrosophila virilisFruit fly 7375LUCCULucilia cuprinaGreen bottle flyAustralian sheep blowfly 43786 Culicomorpha 179676CULSOCulicoides sonorensisBiting midge 7157 Culicidae 7164 Anopheles 7165ANOGAAnopheles gambiaeAfrican malaria mosquito 43151ANODAAnopheles darlingiMosquito 43817 Culicinae 7159AEDAEAedes aegyptiYellow fever mosquito 7176CULQUCulex quinquefasciatusSouthern house mosquitoCulex pungens 7400 Apocrita 7434 Aculeata 7458 Apidae 7460APIMEApis melliferaHoneybee 132113BOMIMBombus impatiensBumblebee 36668 Formicidae 83485LINHULinepithema humileArgentine ant 2015173OOCBIOoceraea biroiAnt 104421CAMFOCamponotus floridanusFlorida carpenter ant 34695 Myrmicinae 12957ATTCEAtta cephalotesLeafcutter ant 13686SOLINSolenopsis invictaRed imported fire antSolenopsis wagneri 610380HARSAHarpegnathos saltatorJerdon's jumping ant 7425NASVINasonia vitripennisParasitic wasp 33342 Paraneoptera 7524 Hemiptera 13249RHOPRRhodnius prolixusTriatomid bug 33373 Sternorrhyncha 7029ACYPIAcyrthosiphon pisumPea aphid 121845DIACIDiaphorina citriAsian citrus psyllid 121224PEDHCPediculus humanus subsp. corporisBody louse 136037ZOONEZootermopsis nevadensisDampwood termite 232323HYPDUHypsibius dujardiniWater bearMacrobiotus dujardini 1206795 Lophotrochozoa 6340 Annelida 6412HELROHelobdella robusta 51293 Capitella 73382CAPI1Capitella sp. 1 283909CAPTECapitella teletaPolychaete worm 7574LINUNLingula unguis 6447 Mollusca 29159CRAGICrassostrea gigasPacific oysterCrassostrea angulata 37653OCTBMOctopus bimaculoidesCalifornia two-spotted octopus 225164LOTGILottia giganteaLimpet 6073 Cnidaria 45351NEMVENematostella vectensisSea anemone 6087HYDVUHydra vulgarisHydraHydra attenuata 669202THEKTThelohanellus kitaueiMyxosporean 27923MNELEMnemiopsis leidyiSea walnutWarty comb jellyfish 10228TRIADTrichoplax adhaerens 400682AMPQEAmphimedon queenslandicaSea sponge 127916 Ichthyosporea 595528CAPO3Capsaspora owczarzaki (strain ATCC 30864) 470921CREFRCreolimax fragrantissima 412133TRIVATrichomonas vaginalis 543769 Rhizaria 753081BIGNCBigelowiella natans (strain CCMP2755) 37360PLABSPlasmodiophora brassicaeClubroot disease 46433RETFIReticulomyxa filosa 2763 Rhodophyta 265316 Cyanidiaceae 45157 Cyanidioschyzon merolae 45157CYAMECyanidioschyzon merolae (disambiguate CYAME)Red alga 280699CYAM1Cyanidioschyzon merolae (strain 10D)Red alga 130081GALSUGaldieria sulphurariaRed alga 2769CHOCRChondrus crispusCarrageen Irish mossPolymorpha crispa 33634 Stramenopiles 2836 Bacillariophyta 556484PHATCPhaeodactylum tricornutum (strain CCAP 1055/1) 35127 Thalassiosira 159749THAOCThalassiosira oceanicaMarine diatom 296543THAPSThalassiosira pseudonanaMarine diatomCyclotella nana 12968BLAHOBlastocystis hominis 1093141NANGCNannochloropsis gaditana (strain CCMP526)Green microalga 4762 Oomycetes 4777 Peronosporaceae 559515HYAAEHyaloperonospora arabidopsidis (strain Emoy2)Downy mildew agentPeronospora arabidopsidis 4783 Phytophthora 403677PHYITPhytophthora infestans (strain T30-4)Potato late blight fungus 4790PHYNIPhytophthora nicotianaeBuckeye rot agent 4792 Phytophthora parasitica 4792PHYPRPhytophthora parasitica (disambiguate PHYPR)Potato buckeye rot agent 761204PHYPNPhytophthora parasitica (strain INRA-310) 164328PHYRMPhytophthora ramorumSudden oak death agent 1094619PHYSPPhytophthora sojae (strain P6497)Soybean stem and root rot agentPhytophthora megasperma f. sp. glycines 4781PLAHLPlasmopara halstediiDowny mildew of sunflower 695850SAPPCSaprolegnia parasitica (strain CBS 223.65) 2880ECTSIEctocarpus siliculosusBrown algaConferva siliculosa 44056AURANAureococcus anophagefferensHarmful bloom alga 33090 Viridiplantae 3041 Chlorophyta 3042 Chlamydomonadales 3055CHLREChlamydomonas reinhardtii 3067VOLCAVolvox carteriGreen alga 13792 Mamiellales 70447 Ostreococcus 70448OSTTAOstreococcus tauri 436017OSTLUOstreococcus lucimarinus (strain CCE9901) 38832 Micromonas 296587MICCCMicromonas commoda (strain RCC299 / NOUM17 / CCMP2709)Picoplanktonic green alga 564608MICPCMicromonas pusilla (strain CCMP1545)Picoplanktonic green alga 554065CHLVAChlorella variabilisGreen alga 35493 Streptophyta 3175KLEFLKlebsormidium flaccidumFilamentous green algaUlothrix flaccida 3193 Embryophyta 3218PHYPAPhyscomitrella patens subsp. patensMoss 3197MARPOMarchantia polymorphaLiverwortMarchantia aquatica 58023 Tracheophyta 58024 Spermatophyta 3318 Pinaceae 3328 Picea 3330PICGLPicea glaucaWhite sprucePinus glauca 3332PICSIPicea sitchensisSitka sprucePinus sitchensis 3352PINTAPinus taedaLoblolly pine 3398 Magnoliopsida 13333AMBTCAmborella trichopoda 1437183 Mesangiospermae 4447 Liliopsida 29655ZOSMRZostera marinaEelgrass 4734 commelinids 4479 Poaceae 359160 BOP clade 4527 Oryza 4533ORYBROryza brachyantha 4538ORYGLOryza glaberrimaAfrican rice 4528ORYLOOryza longistaminataLongstamen rice 4537ORYPUOryza punctataRed rice 4529ORYRUOryza rufipogonBrownbeard riceAsian wild rice 4530 Oryza sativa 4536ORYNIOryza nivaraIndian wild rice 39946ORYSIOryza sativa subsp. indicaRice 39947ORYSJOryza sativa subsp. japonicaRice 147368 Pooideae 15368BRADIBrachypodium distachyonPurple false bromeTrachynia distachya 147389 Triticeae 112509HORVVHordeum vulgare subsp. vulgareDomesticated barley 1648030 Triticinae 37682AEGTAAegilops tauschiiTausch's goatgrassAegilops squarrosa 4564 Triticum 4565WHEATTriticum aestivumWheat 4572TRIUATriticum urartuRed wild einkornCrithodium urartu 147370 PACMAD clade 110835ERATEEragrostis tefTeffPoa tef 147369 Panicoideae 147429 Andropogoneae 4558SORBISorghum bicolorSorghumSorghum vulgare 4577MAIZEZea maysMaize 4555SETITSetaria italicaFoxtail milletPanicum italicum 214687MUSAMMusa acuminata subsp. malaccensisWild bananaMusa malaccensis 1437201 Pentapetalae 63459CHEQIChenopodium quinoaQuinoa 71274 asterids 91882 campanulids 79200DAUCSDaucus carota subsp. sativusCarrot 4232HELANHelianthus annuusCommon sunflower 4070 Solanaceae 4085 Nicotiana 49451NICATNicotiana attenuataCoyote tobacco 4097TOBACNicotiana tabacumCommon tobacco 4107 Solanum 4081SOLLCSolanum lycopersicumTomatoLycopersicon esculentum 4113SOLTUSolanum tuberosumPotato 71275 rosids 91835 fabids 3659CUCSACucumis sativusCucumber 2231393 50 kb inversion clade 2231382 NPAAA clade 2233838 Hologalegina 3880MEDTRMedicago truncatulaBarrel medicMedicago tribuloides 34305LOTJALotus japonicusLotus corniculatus var. japonicus 163735 Phaseoleae 3847SOYBNGlycine maxSoybeanGlycine hispida 3885PHAVUPhaseolus vulgarisKidney beanFrench bean 3914PHAANPhaseolus angularisAzuki beanVigna angularis 3871LUPANLupinus angustifoliusNarrow-leaved blue lupine 3646 Malpighiales 3983MANESManihot esculentaCassavaManioc 3694POPTRPopulus trichocarpaWestern balsam poplarPopulus balsamifera subsp. trichocarpa 3760PRUPEPrunus persicaPeachAmygdalus persica 91836 malvids 3700 Brassicaceae 50452ARAALArabis alpinaAlpine rock-cress 3705 Brassica 51351BRARPBrassica rapa subsp. pekinensisChinese cabbageBrassica pekinensis 3708BRANABrassica napusRape 109376BRAOLBrassica oleraceaWild cabbage 3701 Arabidopsis 59689ARALYArabidopsis lyrataLyre-leaved rock-cressArabis lyrata 3702ARATHArabidopsis thalianaMouse-ear cress 3629 Malvaceae 3641THECCTheobroma cacaoCacaoCocoa 210143COCAPCorchorus capsularisJute 3633 Gossypium 29729GOSARGossypium arboreumTree cottonGossypium nanking 3635GOSHIGossypium hirsutumUpland cottonGossypium mexicanum 29730GOSRAGossypium raimondiiNew World cotton 29760VITVIVitis viniferaGrape 88036SELMLSelaginella moellendorffiiSpikemoss