List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 1129

threonine synthase
This group has 13 members: 1 [E]ukaryota 12 [B]acteria
Fingerprint: YPKDGTS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Ustilago maydisUSTMA04335  UniProtKB/TrEMBL Q4P6C2  ustilago_maydis hypothetical protein
[B] Campylobacter fetus subsp. fetus (strain 82-40)CAMFF01030  UniProtKB/TrEMBL A0RPW0  threonine synthase identified by match to protein family HMM PF00291; match to protein family HMM PF03091; match to protein family HMM TIGR00260
[B] Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)CAMHC00958  UniProtKB/TrEMBL A7I239  Threonine synthase
[B] Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)CAMJD00975  UniProtKB/TrEMBL A7H437  Threonine synthase
[B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)CAMLR00859  UniProtKB/TrEMBL B9KCD8  Threonine synthase
[B] Helicobacter acinonychis (strain Sheeba)HELAH01310  UniProtKB/TrEMBL Q17VX3  (Q9ZMX5) Threonine synthase (EC 4.2.3.1) High confidence in function and specificity
[B] Helicobacter hepaticusHELHP00526  UniProtKB/TrEMBL Q7VIS7  threonine synthase
[B] Helicobacter pyloriHELPY00096  UniProtKB/Swiss-Prot THRC_HELPY  similar to GB:L42023 SP:P44503 PID:1003078 PID:1221997 PID:1204345 percent identity: 32.89; identified by sequence similarity; putative threonine synthase (thrC)
[B] Helicobacter pylori (strain G27)HELPG00083  UniProtKB/TrEMBL B5Z9M9  Threonine synthase
[B] Helicobacter pylori (strain HPAG1)HELPH00099  UniProtKB/TrEMBL Q1CV57  threonine synthase
[B] Helicobacter pylori (strain Shi470)HELPS00091  UniProtKB/TrEMBL B2URS8  Threonine synthase
[B] Helicobacter pylori J99HELPJ00089  UniProtKB/Swiss-Prot THRC_HELPJ  Threonine synthase
[B] Thiomicrospira crunogena (strain XCL-2)THICR01246  UniProtKB/TrEMBL Q31G79  threonine synthase