List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 1129
threonine synthase
This group has 13 members: 1 [E]ukaryota 12 [B]acteria
Fingerprint: YPKDGTS
| [E] Ustilago maydis | USTMA04335 | Q4P6C2 | ustilago_maydis hypothetical protein |
| [B] Campylobacter fetus subsp. fetus (strain 82-40) | CAMFF01030 | A0RPW0 | threonine synthase identified by match to protein family HMM PF00291; match to protein family HMM PF03091; match to protein family HMM TIGR00260 |
| [B] Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) | CAMHC00958 | A7I239 | Threonine synthase |
| [B] Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) | CAMJD00975 | A7H437 | Threonine synthase |
| [B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) | CAMLR00859 | B9KCD8 | Threonine synthase |
| [B] Helicobacter acinonychis (strain Sheeba) | HELAH01310 | Q17VX3 | (Q9ZMX5) Threonine synthase (EC 4.2.3.1) High confidence in function and specificity |
| [B] Helicobacter hepaticus | HELHP00526 | Q7VIS7 | threonine synthase |
| [B] Helicobacter pylori | HELPY00096 | THRC_HELPY | similar to GB:L42023 SP:P44503 PID:1003078 PID:1221997 PID:1204345 percent identity: 32.89; identified by sequence similarity; putative threonine synthase (thrC) |
| [B] Helicobacter pylori (strain G27) | HELPG00083 | B5Z9M9 | Threonine synthase |
| [B] Helicobacter pylori (strain HPAG1) | HELPH00099 | Q1CV57 | threonine synthase |
| [B] Helicobacter pylori (strain Shi470) | HELPS00091 | B2URS8 | Threonine synthase |
| [B] Helicobacter pylori J99 | HELPJ00089 | THRC_HELPJ | Threonine synthase |
| [B] Thiomicrospira crunogena (strain XCL-2) | THICR01246 | Q31G79 | threonine synthase |