List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 219168

Putative secreted pectinesterase
This group has 3 members: 1 [E]ukaryota 2 [B]acteria
Fingerprint: YKLARPW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Vitis viniferaVITVI20405  UniProtKB/TrEMBL A7PBL8  
[B] Phytoplasma sp. (strain STRAWB1)STRAW06372  UniProtKB/TrEMBL Q829N4  Putative secreted pectinesterase
[B] Streptomyces coelicolorSTRCO01861  UniProtKB/TrEMBL Q93RU7  SCI39.26c, probable secreted pectinesterase, len: 381 aa; similar to SW:PME_BURSO (EMBL:M62803) Burkholderia solanacearum pectinesterase precursor (EC 3.1.1.11) Pme, 396 aa; fasta scores: opt: 350 Z-score: 372.6 bits: 77.7 E(): 3.7e-13; 32.036% identity in 334 aa overlap. Contains Pfam match to entry PF01095 Pectinesterase, Pectinesterase and match to Prosite entry PS00503 Pectinesterase signature 2. Contains also possible N-terminal region signal peptide sequence putative secreted pectinesterase