List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
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Note that not all pairs of proteins coming
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been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
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proteins that have complementary function
(e.g. member of the same metabolic pathway).
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This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
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OMA fingerprint
The fingerprint is a subsequence that is specific to a
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Since the group number is specific to a release, this
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OMA

Keyword Protein Sequence Group Entry

OMA Group 9111

A lig
This group has 625 members: 3 [A]rchaea 622 [B]acteria
Fingerprint: IKHFASR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Haloarcula marismortuiHALMA02680  UniProtKB/Swiss-Prot DNLJ_HALMA  DNA ligase
[A] Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)HALLT02593  UniProtKB/Swiss-Prot DNLJ_HALLT  DNA ligase, NAD-dependent
[A] Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)NATPD00439  UniProtKB/Swiss-Prot DNLJ_NATPD  DNA ligase (NAD)
[B] Acidobacteria bacterium (strain Ellin345)ACIBL04645  UniProtKB/Swiss-Prot DNLJ_ACIBL  DNA ligase, NAD-dependent
[B] Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)ACIC501719  UniProtKB/Swiss-Prot DNLJ_ACIC5  DNA ligase, NAD-dependent
[B] Corynebacterium diphtheriaeCORDI01047  UniProtKB/Swiss-Prot DNLJ_CORDI  Similar to Mycobacterium tuberculosis DNA ligase LigA or Lig or Rv3014c or MT3094 or MTV012.28c SW:DNLJ_MYCTU (O53261) (691 aa) fasta scores: E(): 4.7e-155, 60.86% id in 672 aa, and to Escherichia coli DNA ligase LigA or Lig or DnaL or PdeC or Lop or B2411 SW:DNLJ_ECOLI (P15042) (671 aa) fasta scores: E(): 4.4e-92, 41.58% id in 683 aa DNA ligase
[B] Corynebacterium glutamicumCORGL01882  UniProtKB/Swiss-Prot DNLJ_CORGL  DNA ligase
[B] Corynebacterium glutamicum (strain R)CORGB01339  UniProtKB/Swiss-Prot DNLJ_CORGB  Hypothetical protein
[B] Corynebacterium jeikeium (strain K411)CORJK01256  UniProtKB/Swiss-Prot DNLJ_CORJK  DNA ligase
[B] Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)CORU700725  UniProtKB/Swiss-Prot DNLJ_CORU7  DNA ligase
[B] Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)MYCA903316  UniProtKB/Swiss-Prot DNLJ_MYCA9  DNA ligase
[B] Mycobacterium avium (strain 104)MYCA103647  UniProtKB/Swiss-Prot DNLJ_MYCA1  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Mycobacterium gilvum (strain PYR-GCK)MYCGI04146  UniProtKB/Swiss-Prot DNLJ_MYCGI  DNA ligase, NAD-dependent KEGG: mva:Mvan_2112 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: NAD-dependent DNA ligase-like
[B] Mycobacterium lepraeMYCLE01698  UniProtKB/Swiss-Prot DNLJ_MYCLE  Highly similar to many DNA ligases (EC 6.5.1.2) essential for DNA replication and repair, including: DNLJ_ECOLI and Mycobacterium tuberculosis RV3014C SW:DNLJ_MYCTU (O53261) (691 aa); Fasta score E(): 0, 84.7% identity in 687 aa overlap. Contains Pfam match to entry PF01653 DNA_ligase_N, NAD-dependent DNA ligase. Contains Pfam match to entry PF00533 BRCT, BRCA1 C Terminus (BRCT) domain. Contains PS01055 NAD-dependent DNA ligase signature 1. DNA ligase
[B] Mycobacterium leprae (strain Br4923)MYCLB01688  UniProtKB/Swiss-Prot DNLJ_MYCLB  DNA ligase
[B] Mycobacterium marinum (strain ATCC BAA-535 / M)MYCMM01657  UniProtKB/Swiss-Prot DNLJ_MYCMM  DNA ligase [NAD dependent] LigA
[B] Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)MYCS202195  UniProtKB/Swiss-Prot DNLJ_MYCS2  DNA ligase, NAD-dependent
[B] Mycobacterium sp. (strain JLS)MYCSJ01819  UniProtKB/Swiss-Prot DNLJ_MYCSJ  DNA ligase, NAD-dependent KEGG: mmc:Mmcs_1881 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: NAD-dependent DNA ligase-like
[B] Mycobacterium sp. (strain KMS)MYCSK01861  UniProtKB/Swiss-Prot DNLJ_MYCSK  DNA ligase, NAD-dependent KEGG: mmc:Mmcs_1881 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: NAD-dependent DNA ligase-like
[B] Mycobacterium sp. (strain MCS)MYCSS01849  UniProtKB/Swiss-Prot DNLJ_MYCSS  DNA ligase, NAD-dependent
[B] Mycobacterium bovisMYCBO03030  UniProtKB/Swiss-Prot DNLJ_MYCBO  Mb3039c, ligA, len: 691 aa. Equivalent to Rv3014c, len: 691 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 691 aa overlap). Probable ligA (alternate gene name: lig), DNA ligase NAD-dependent (EC 6.5.1.2), equivalent to O33102|DNLJ_MYCLE|LIGA|LIG|ML1705|MLCB637.10 DNA LIGASE from Mycobacterium leprae (694 aa), FASTA scores: opt: 3844, E(): 0, (84.7% identity in 687 aa overlap). Also highly similar to many prokaryotic and eukaryotic ligases e.g. Q9Z585|LIGA|SC8D9.06 from Streptomyces coelicolor (735 aa), FASTA scores: opt: 2002, E(): 4e-113, (59.4% identity in 714 aa overlap); P49421|DNLJ_RHOMR|LIGA|LIG from Rhodothermus marinus (712 aa), FASTA scores: opt: 1835, E(): 4.6e-103, (45.55% identity in 685 aa overlap); P15042|DNLJ_ECOLI|LIGA|LIG|DNAL|PDEC|LOP|B2411 from Escherichia coli strain K12 (671 aa), FASTA scores: opt: 1696, E(): 1.1e-94, (43.8% identity in 680 aa overlap); etc. BELONGS TO THE NAD-DEPENDENT DNA LIGASE FAMILY. PROBABLE DNA LIGASE [NAD DEPENDENT] LIGA (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+])
[B] Mycobacterium bovis (strain BCG / Paris 1173P2)MYCBP03010  UniProtKB/Swiss-Prot DNLJ_MYCBP  Probable dna ligase [nad dependent] ligA
[B] Mycobacterium tuberculosisMYCTU04144  UniProtKB/Swiss-Prot DNLJ_MYCTU  DNA ligase
[B] Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)MYCTA03073  UniProtKB/Swiss-Prot DNLJ_MYCTA  DNA ligase (NAD dependent) LigA
[B] Mycobacterium tuberculosis (strain F11)MYCTF02946  UniProtKB/TrEMBL A5WRR7  DNA ligase [NAD dependent] ligA Mapped to H37Rv Rv3014c
[B] Mycobacterium ulcerans (strain Agy99)MYCUA01584  UniProtKB/Swiss-Prot DNLJ_MYCUA  DNA ligase [NAD dependent] LigA cytoplasmic protein this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'- hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. it is essential for DNA replication and repair of damaged DNA [catalytic activity: NAD(+) + (deoxyribonucleotide)(N) + (deoxyribonucleotide)(M) = AMP + nicotinamide nucleotide + (deoxyribonucleotide)(N+M)]
[B] Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)MYCVP02023  UniProtKB/Swiss-Prot DNLJ_MYCVP  DNA ligase, NAD-dependent KEGG: mmc:Mmcs_1881 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: NAD-dependent DNA ligase-like
[B] Nocardia farcinicaNOCFA04269  UniProtKB/Swiss-Prot DNLJ2_NOCFA  putative DNA ligase
[B] Rhodococcus erythropolis (strain PR4 / NBRC 100887)RHOE402374  UniProtKB/Swiss-Prot DNLJ_RHOE4  NAD(+)-dependent DNA ligase
[B] Rhodococcus opacus (strain B4)RHOOB06517  UniProtKB/Swiss-Prot DNLJ_RHOOB  NAD(+)-dependent DNA ligase
[B] Rhodococcus sp. (strain RHA1)RHOSR06379  UniProtKB/Swiss-Prot DNLJ_RHOSR  DNA ligase
[B] Acidothermus cellulolyticus (strain ATCC 43068 / 11B)ACIC100691  UniProtKB/Swiss-Prot DNLJ_ACIC1  DNA ligase, NAD-dependent KEGG: mbo:Mb3039c DNA ligase TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold
[B] Frankia alni (strain ACN14a)FRAAA05723  UniProtKB/Swiss-Prot DNLJ_FRAAA  DNA ligase Evidence 2b : Function of strongly homologous gene; Product type e : enzyme
[B] Frankia sp. (strain CcI3)FRASC03537  UniProtKB/Swiss-Prot DNLJ_FRASC  DNA ligase, NAD-dependent
[B] Frankia sp. (strain EAN1pec)FRASN01061  UniProtKB/Swiss-Prot DNLJ_FRASN  DNA ligase, NAD-dependent
[B] Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD01311  UniProtKB/Swiss-Prot DNLJ_KINRD  DNA ligase, NAD-dependent
[B] Tropheryma whipplei (strain TW08/27)TROW800334  UniProtKB/Swiss-Prot DNLJ_TROW8  Similar to Rhodothermus marinus DNA ligase LigA or Lig SWALL:DNLJ_RHOMR (SWALL:P49421) (712 aa) fasta scores: E(): 2.1e-36, 35.52% id in 625 aa DNA ligase
[B] Tropheryma whipplei (strain Twist)TROWT00412   NP_787542.1  DNA ligase
[B] Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)CLAM301421  UniProtKB/Swiss-Prot DNLJ_CLAM3  NAD-dependant DNA ligase
[B] Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667)CLAMS01010  UniProtKB/Swiss-Prot DNLJ_CLAMS  DNA ligase
[B] Leifsonia xyli (subsp. xyli)LEIXX01127  UniProtKB/Swiss-Prot DNLJ_LEIXX  identified by sequence similarity DNA ligase
[B] Arthrobacter aurescens (strain TC1)ARTAT01372  UniProtKB/Swiss-Prot DNLJ_ARTAT  DNA ligase, NAD-dependent
[B] Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)ARTCA01327  UniProtKB/Swiss-Prot DNLJ1_ARTCA  DNA ligase
[B] Arthrobacter sp. (strain FB24)ARTS201288  UniProtKB/Swiss-Prot DNLJ_ARTS2  DNA ligase, NAD-dependent KEGG: pac:PPA1626 DNA ligase TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold
[B] Kocuria rhizophila (strain ATCC 9341 / NBRC 12708 / DC2201)KOCRD01669  UniProtKB/Swiss-Prot DNLJ_KOCRD  NAD-dependent DNA ligase
[B] Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589)RENSM02829  UniProtKB/Swiss-Prot DNLJ_RENSM  NAD-dependent DNA ligase
[B] Salinispora arenicola (strain CNS-205)SALAI01078  UniProtKB/Swiss-Prot DNLJ_SALAI  DNA ligase, NAD-dependent
[B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO01200  UniProtKB/Swiss-Prot DNLJ_SALTO  DNA ligase, NAD-dependent
[B] Nocardioides sp. (strain BAA-499 / JS614)NOCSJ03368  UniProtKB/Swiss-Prot DNLJ_NOCSJ  DNA ligase, NAD-dependent precursor
[B] Propionibacterium acnesPROAC01597  UniProtKB/Swiss-Prot DNLJ_PROAC  DNA ligase
[B] Saccharopolyspora erythraea (strain NRRL 23338)SACEN05945  UniProtKB/Swiss-Prot DNLJ_SACEN  DNA ligase, NAD-dependent
[B] Streptomyces coelicolorSTRCO05462  UniProtKB/Swiss-Prot DNLJ1_STRCO  SC8D9.06, ligA, probable DNA ligase, len: 735aa; similar to many eg. SW:DNLJ_ECOLI DNA ligase from Escherichia coli (671 aa) fasta scores; opt: 1318, z-score: 1448.0, E(): 0, (41.6% identity in 694 aa overlap). Contains PS01055 NAD-dependent DNA ligase signature 1. Also contains Pfam match to entry PF00533 BRCT, BRCA1 C Terminus (BRCT) domain, score 41.70, E-value 1.7e-08. putative DNA ligase
[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG01894  UniProtKB/Swiss-Prot DNLJ2_STRGG  Putative DNA ligase
[B] Thermobifida fusca (strain YX)THEFY00601  UniProtKB/Swiss-Prot DNLJ_THEFY  NAD-dependent DNA ligase
[B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083)BIFAA00949  UniProtKB/Swiss-Prot DNLJ_BIFAA  LigA Orthologue of BL0052
[B] Bifidobacterium longumBIFLO00052  UniProtKB/Swiss-Prot DNLJ_BIFLO  DNA ligase
[B] Bifidobacterium longum (strain DJO10A)BIFLD00059  UniProtKB/Swiss-Prot DNLJ_BIFLD  NAD-dependent DNA ligase
[B] Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)RUBXD00322  UniProtKB/Swiss-Prot DNLJ_RUBXD  DNA ligase, NAD-dependent KEGG: chy:CHY_1100 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif BRCT NAD-dependent DNA ligase zinc-finger, NAD-dependent DNA ligase C4-type NAD-dependent DNA ligase, OB-fold SMART: Helix-hairpin-helix DNA-binding, class 1
[B] Symbiobacterium thermophilumSYMTH02779  UniProtKB/Swiss-Prot DNLJ_SYMTH  NAD-dependent DNA ligase
[B] Hydrogenobaculum sp. (strain Y04AAS1)HYDS000888  UniProtKB/Swiss-Prot DNLJ_HYDS0  DNA ligase, NAD-dependent
[B] Bacteroides fragilisBACFR02391  UniProtKB/Swiss-Prot DNLJ_BACFR  similar to gp:AE016929_164 [Bacteroides thetaiotaomicron VPI-5482], percent identity 90 in 666 aa, BLASTP E(): 0.0 DNA ligase
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN02402  UniProtKB/Swiss-Prot DNLJ_BACFN  Similar to Escherichia coli DNA ligase LigA or Lig or DnaL or PdeC or Lop or B2411 SWALL:DNLJ_ECOLI (SWALL:P15042) (671 aa) fasta scores: E(): 4.3e-104, 42.75% id in 669 aa, and to Bacteroides thetaiotaomicron DNA ligase BT0894 SWALL:AAO76001 (EMBL:AE016929) (666 aa) fasta scores: E(): 0, 90.24% id in 666 aa putative DNA ligase
[B] Bacteroides thetaiotaomicronBACTN00890  UniProtKB/Swiss-Prot DNLJ_BACTN  DNA ligase
[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV803125  UniProtKB/Swiss-Prot DNLJ_BACV8  DNA ligase
[B] Azobacteroides pseudotrichonymphae genomovar. CFP2AZOPC00625  UniProtKB/Swiss-Prot DNLJ_AZOPC  NAD-dependent DNA ligase
[B] Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)PARD800763  UniProtKB/Swiss-Prot DNLJ_PARD8  DNA ligase
[B] Porphyromonas gingivalisPORGI01059  UniProtKB/Swiss-Prot DNLJ_PORGI  DNA ligase, NAD-dependent
[B] Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257)PORG301323  UniProtKB/Swiss-Prot DNLJ_PORG3  DNA ligase
[B] Amoebophilus asiaticus (strain 5a2)AMOA501176  UniProtKB/Swiss-Prot DNLJ_AMOA5  Putative uncharacterized protein
[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ103450  UniProtKB/Swiss-Prot DNLJ_FLAJ1  DNA ligase
[B] Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)FLAPJ01792  UniProtKB/Swiss-Prot DNLJ_FLAPJ  DNA ligase
[B] Gramella forsetii (strain KT0803)GRAFK00626  UniProtKB/Swiss-Prot DNLJ_GRAFK  DNA ligase
[B] Salinibacter ruber (strain DSM 13855)SALRD00855  UniProtKB/Swiss-Prot DNLJ_SALRD  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)CYTH301289  UniProtKB/Swiss-Prot DNLJ_CYTH3  DNA ligase
[B] Chlamydia muridarumCHLMU00412  UniProtKB/Swiss-Prot DNLJ_CHLMU  similar to GB:M24278, SP:P15042, GB:M30255, PID:146613, PID:146615, GB:U00096, PID:1788750, and PID:1816524; identified by sequence similarity; putative DNA ligase
[B] Chlamydia trachomatisCHLTR00148  UniProtKB/Swiss-Prot DNLJ_CHLTR  DNA Ligase
[B] Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B)CHLTA00150  UniProtKB/Swiss-Prot DNLJ_CHLTA  NAD-dependent DNA ligase
[B] Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B)CHLT200397  UniProtKB/Swiss-Prot DNLJ_CHLT2  NAD-dependent DNA ligase
[B] Chlamydia trachomatis (strain L2b/UCH-1/proctitis)CHLTB00397  UniProtKB/Swiss-Prot DNLJ_CHLTB  NAD-dependent DNA ligase
[B] Chlamydia pneumoniaeCHLPN00633  UniProtKB/Swiss-Prot DNLJ_CHLPN  DNA ligase
[B] Chlamydophila abortusCHLAB00579  UniProtKB/Swiss-Prot DNLJ_CHLAB  Similar to Bacillus subtilis DNA ligase LigA or Lig or bsu06620 SWALL:DNLJ_BACSU (SWALL:O31498) (668 aa) fasta scores: E(): 6e-97, 40.99% id in 666 aa, and to Chlamydophila caviae DNA ligase LigA or cca00617 SWALL:Q822R2 (EMBL:AE016996) (662 aa) fasta scores: E(): 1.2e-217, 83.63% id in 660 aa, and to Thermoanaerobacter tengcongensis NAD-dependent DNA ligase Lig or tte0605 SWALL:Q8RC42 (EMBL:AE013029) (666 aa) fasta scores: E(): 5.4e-100, 43.6% id in 665 aa putative DNA ligase
[B] Chlamydophila caviaeCHLCV00606  UniProtKB/Swiss-Prot DNLJ_CHLCV  identified by match to PFAM protein family HMM PF03118 DNA ligase
[B] Chlamydophila felis (strain Fe/C-56)CHLFF00387  UniProtKB/Swiss-Prot DNLJ_CHLFF  DNA ligase EC 6.5.1.2
[B] Parachlamydia sp. (strain UWE25) (subsp. Acanthamoeba sp.)PARUW01755  UniProtKB/Swiss-Prot DNLJ_PARUW  strongly similar to DNA ligase probable DNA ligase
[B] Chlorobaculum parvum (strain NCIB 8327)CHLP800446  UniProtKB/Swiss-Prot DNLJ_CHLP8  DNA ligase, NAD-dependent
[B] Chlorobium tepidumCHLTE00450  UniProtKB/Swiss-Prot DNLJ_CHLTE  DNA ligase
[B] Chlorobium chlorochromatii (strain CaD3)CHLCH00270  UniProtKB/Swiss-Prot DNLJ_CHLCH  NAD-dependent DNA ligase
[B] Chlorobium phaeobacteroides (strain BS1)CHLPB00432  UniProtKB/Swiss-Prot DNLJ_CHLPB  DNA ligase, NAD-dependent
[B] Chlorobium phaeobacteroides (strain DSM 266)CHLPD00441  UniProtKB/Swiss-Prot DNLJ_CHLPD  DNA ligase, NAD-dependent KEGG: plt:Plut_1699 DNA ligase (NAD+) TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
[B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78)CHLT300089  UniProtKB/Swiss-Prot DNLJ_CHLT3  DNA ligase, NAD-dependent
[B] Pelodictyon luteolum (strain DSM 273)PELLD01652  UniProtKB/Swiss-Prot DNLJ_PELLD  DNA ligase (NAD+)
[B] Prosthecochloris aestuarii (strain DSM 271 / SK 413)PROA200417  UniProtKB/Swiss-Prot DNLJ_PROA2  DNA ligase, NAD-dependent
[B] Chloroflexus aggregans (strain MD-66 / DSM 9485)CHLAD03538  UniProtKB/Swiss-Prot DNLJ_CHLAD  DNA ligase, NAD-dependent
[B] Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)CHLSY00247  UniProtKB/Swiss-Prot DNLJ_CHLSY  DNA ligase, NAD-dependent
[B] Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)CHLAA00236  UniProtKB/Swiss-Prot DNLJ_CHLAA  DNA ligase, NAD-dependent
[B] Roseiflexus castenholzii (strain DSM 13941 / HLO8)ROSCS00852  UniProtKB/Swiss-Prot DNLJ_ROSCS  DNA ligase, NAD-dependent KEGG: rrs:RoseRS_4515 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
[B] Roseiflexus sp. (strain RS-1)ROSS104380  UniProtKB/Swiss-Prot DNLJ_ROSS1  DNA ligase, NAD-dependent
[B] Dehalococcoides ethenogenes (strain 195)DEHE100536  UniProtKB/Swiss-Prot DNLJ_DEHE1  identified by match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Dehalococcoides sp. (strain BAV1)DEHSB00550  UniProtKB/Swiss-Prot DNLJ_DEHSB  DNA ligase, NAD-dependent
[B] Dehalococcoides sp. (strain CBDB1)DEHSC00480  UniProtKB/Swiss-Prot DNLJ_DEHSC  DNA ligase, NAD-dependent
[B] Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)HERA200804  UniProtKB/Swiss-Prot DNLJ_HERA2  DNA ligase, NAD-dependent
[B] Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)THERP00206  UniProtKB/Swiss-Prot DNLJ_THERP  DNA ligase, NAD-dependent
[B] Acaryochloris marina (strain MBIC 11017)ACAM101085  UniProtKB/Swiss-Prot DNLJ_ACAM1  DNA ligase, NAD-dependent
[B] Cyanothece (strain ATCC 51142)CYAA501798  UniProtKB/Swiss-Prot DNLJ_CYAA5  DNA ligase
[B] Cyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP400458  UniProtKB/Swiss-Prot DNLJ_CYAP4  DNA ligase
[B] Gloeobacter violaceusGLOVI00725  UniProtKB/Swiss-Prot DNLJ_GLOVI  DNA ligase
[B] Microcystis aeruginosa (strain NIES-843)MICAN01219  UniProtKB/Swiss-Prot DNLJ_MICAN  DNA ligase
[B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP202603  UniProtKB/Swiss-Prot DNLJ_SYNP2  DNA ligase, NAD-dependent
[B] Synechococcus sp. (strain CC9311)SYNS302744  UniProtKB/Swiss-Prot DNLJ_SYNS3  DNA ligase, NAD-dependent
[B] Synechococcus sp. (strain CC9605)SYNSC02491  UniProtKB/Swiss-Prot DNLJ_SYNSC  DNA ligase, NAD-dependent
[B] Synechococcus sp. (strain CC9902)SYNS902185  UniProtKB/Swiss-Prot DNLJ_SYNS9  DNA ligase (NAD+)
[B] Synechococcus sp. (strain JA-3-3Ab)SYNJA00755  UniProtKB/Swiss-Prot DNLJ_SYNJA  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Synechococcus sp. (strain PCC 6301)SYNP601231  UniProtKB/Swiss-Prot DNLJ_SYNP6  DNA ligase
[B] Synechococcus sp. (strain RCC307)SYNR302406  UniProtKB/Swiss-Prot DNLJ_SYNR3  NAD-dependent DNA ligase
[B] Synechococcus sp. (strain WH7803)SYNPW02425  UniProtKB/Swiss-Prot DNLJ_SYNPW  NAD-dependent DNA ligase
[B] Synechococcus sp. (strain WH8102)SYNPX02386  UniProtKB/Swiss-Prot DNLJ_SYNPX  DNA ligase
[B] Synechocystis sp. (strain PCC 6803)SYNY300009  UniProtKB/Swiss-Prot DNLJ_SYNY3  DNA ligase
[B] Thermosynechococcus elongatus (strain BP-1)THEEB00835  UniProtKB/Swiss-Prot DNLJ_THEEB  DNA ligase
[B] Anabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT00309  UniProtKB/Swiss-Prot DNLJ_ANAVT  NAD-dependent DNA ligase
[B] Anabaena sp. (strain PCC 7120)ANASP01700  UniProtKB/Swiss-Prot DNLJ_ANASP  DNA ligase
[B] Trichodesmium erythraeum (strain IMS101)TRIEI01951  UniProtKB/Swiss-Prot DNLJ_TRIEI  DNA ligase, NAD-dependent
[B] Prochlorococcus marinusPROMA01837  UniProtKB/Swiss-Prot DNLJ_PROMA  contains BRCT domain type II NAD-dependent DNA ligase
[B] Prochlorococcus marinus (strain MIT 9211)PROM401807  UniProtKB/Swiss-Prot DNLJ_PROM4  DNA ligase
[B] Prochlorococcus marinus (strain MIT 9303)PROM302866  UniProtKB/Swiss-Prot DNLJ_PROM3  NAD-dependent DNA ligase
[B] Prochlorococcus marinus (strain MIT 9313)PROMM02174  UniProtKB/Swiss-Prot DNLJ_PROMM  BRCT domain:NAD-dependent DNA ligase N-terminus:NAD-dependent...
[B] Prochlorococcus marinus (strain NATL1A)PROM102123  UniProtKB/Swiss-Prot DNLJ_PROM1  NAD-dependent DNA ligase
[B] Prochlorococcus marinus (strain NATL2A)PROMT02090  UniProtKB/Swiss-Prot DNLJ_PROMT  NAD-dependent DNA ligase
[B] Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV01346  UniProtKB/Swiss-Prot DNLJ2_DEIDV  Putative DNA ligase
[B] Deinococcus geothermalis (strain DSM 11300)DEIGD00688  UniProtKB/Swiss-Prot DNLJ_DEIGD  DNA ligase, NAD-dependent KEGG: dra:DR2069 DNA ligase, ev=0.0, 79% identity TIGRFAM: DNA ligase, NAD-dependent: (0) PFAM: helix-hairpin-helix motif: (0.00049) BRCT: (6.6e-17) NAD-dependent DNA ligase: (8.3e-139) zinc-finger, NAD-dependent DNA ligase C4-type: (1.6e-13) NAD-dependent DNA ligase, OB-fold: (6.7e-49) SMART: Helix-hairpin-helix DNA-binding, class 1: (0.4)
[B] Deinococcus radioduransDEIRA02009  UniProtKB/Swiss-Prot DNLJ_DEIRA  DNA ligase
[B] Bacillus amyloliquefaciens (strain FZB42)BACA200639  UniProtKB/Swiss-Prot DNLJ_BACA2  LigA
[B] Bacillus anthracisBACAN00281  UniProtKB/Swiss-Prot DNLJ_BACAN  similar to SP:O87703; identified by sequence similarity; putative DNA ligase, NAD-dependent
[B] Bacillus cereus (strain AH187)BACC700283  UniProtKB/Swiss-Prot DNLJ_BACC7  DNA ligase
[B] Bacillus cereus (strain ATCC 10987)BACC100328  UniProtKB/Swiss-Prot DNLJ_BACC1  identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Bacillus cereus (strain ATCC 14579 / DSM 31)BACCR00269  UniProtKB/Swiss-Prot DNLJ_BACCR  NAD-dependent DNA ligase
[B] Bacillus cereus (strain G9842)BACC200270  UniProtKB/Swiss-Prot DNLJ_BACC2  DNA ligase
[B] Bacillus cereus (strain ZK)BACCZ00269  UniProtKB/Swiss-Prot DNLJ_BACCZ  DNA ligase(NAD+) (NAD-dependent DNA ligase)
[B] Bacillus cereus subsp. cytotoxis (strain NVH 391-98)BACCN00273  UniProtKB/Swiss-Prot DNLJ_BACCN  DNA ligase, NAD-dependent
[B] Bacillus clausii (strain KSM-K16)BACSK01081  UniProtKB/Swiss-Prot DNLJ_BACSK  NAD-dependent polydeoxyribonucleotide synthase DNA ligase
[B] Bacillus haloduransBACHD00638  UniProtKB/Swiss-Prot DNLJ_BACHD  DNA ligase (polydeoxyribonucleotide synthase (NAD+))
[B] Bacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD00658  UniProtKB/Swiss-Prot DNLJ_BACLD  InterProMatches:IPR001679; Molecular Function: DNA ligase (NAD+) activity (GO:0003911), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281) DNA ligase
[B] Bacillus pumilus (strain SAFR-032)BACP200617  UniProtKB/Swiss-Prot DNLJ_BACP2  DNA ligase
[B] Bacillus subtilisBACSU00661  UniProtKB/Swiss-Prot DNLJ_BACSU  DNA ligase
[B] Bacillus thuringiensis (strain Al Hakam)BACAH00275  UniProtKB/Swiss-Prot DNLJ_BACAH  NAD-dependent DNA ligase
[B] Bacillus thuringiensis (subsp. konkukian)BACHK00266  UniProtKB/Swiss-Prot DNLJ_BACHK  DNA ligase(NAD+) (NAD-dependent DNA ligase)
[B] Bacillus weihenstephanensis (strain KBAB4)BACWK00284  UniProtKB/Swiss-Prot DNLJ_BACWK  DNA ligase, NAD-dependent
[B] Geobacillus kaustophilusGEOKA00271  UniProtKB/Swiss-Prot DNLJ_GEOKA  DNA ligase (polydeoxyribonucleotide synthase[NAD+])
[B] Geobacillus thermodenitrificans (strain NG80-2)GEOTN00250  UniProtKB/Swiss-Prot DNLJ_GEOTN  DNA ligase
[B] Lysinibacillus sphaericus (strain C3-41)LYSSC00211  UniProtKB/Swiss-Prot DNLJ_LYSSC  DNA ligase
[B] Oceanobacillus iheyensisOCEIH00765  UniProtKB/Swiss-Prot DNLJ_OCEIH  CDS_ID OB0760; polydeoxyribonucleotide synthase[NAD+] DNA ligase
[B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS200457  UniProtKB/Swiss-Prot DNLJ_EXIS2  DNA ligase, NAD-dependent
[B] Listeria innocuaLISIN01848  UniProtKB/Swiss-Prot DNLJ_LISIN  similar to DNA ligase
[B] Listeria monocytogenesLISMO01754  UniProtKB/Swiss-Prot DNLJ_LISMO  similar to DNA ligase
[B] Listeria monocytogenes (serotype 4b / strain F2365)LISMF01763  UniProtKB/Swiss-Prot DNLJ_LISMF  identified by similarity to SP:O87703; match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Listeria monocytogenes serotype 4a (strain HCC23)LISMH00791  UniProtKB/Swiss-Prot DNLJ_LISMH  DNA ligase, NAD-dependent
[B] Listeria monocytogenes serotype 4b (strain Clip81459)LISMC01742  UniProtKB/Swiss-Prot DNLJ_LISMC  Putative DNA ligase
[B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)LISW601773  UniProtKB/Swiss-Prot DNLJ_LISW6  LigA protein
[B] Macrococcus caseolyticus (strain JCSC5402)MACCJ01643  UniProtKB/Swiss-Prot DNLJ_MACCJ  DNA ligase
[B] Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)BREBN00685  UniProtKB/Swiss-Prot DNLJ_BREBN  NAD-dependent DNA ligase
[B] Staphylococcus aureus (strain COL)STAAC01915  UniProtKB/Swiss-Prot DNLJ_STAAC  identified by similarity to SP:O87703; match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Staphylococcus aureus (strain JH1)STAA201936  UniProtKB/Swiss-Prot DNLJ_STAA2  DNA ligase, NAD-dependent KEGG: sav:SAV1904 DNA ligase TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
[B] Staphylococcus aureus (strain JH9)STAA901908  UniProtKB/Swiss-Prot DNLJ_STAA9  DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
[B] Staphylococcus aureus (strain MRSA252)STAAR01932  UniProtKB/Swiss-Prot DNLJ_STAAR  Previously sequenced as Staphylococcus aureus DNA ligase Lig TR:Q9AIU7 (EMBL:AF234833) (667 aa) fasta scores: E(): 0, 99.55% id in 667 aa. Similar to Bacillus subtilis DNA ligase LigA SW:DNLJ_BACSU (O31498) (668 aa) fasta scores: E(): 4.1e-153, 61.79% id in 657 aa DNA ligase
[B] Staphylococcus aureus (strain MSSA476)STAAS01836  UniProtKB/Swiss-Prot DNLJ_STAAS  Ortholog of S. aureus MRSA252 (BX571856) SAR1996 DNA ligase
[B] Staphylococcus aureus (strain MW2)STAAW01844  UniProtKB/Swiss-Prot DNLJ_STAAW  polydeoxyribonucleotide syntase DNA ligase
[B] Staphylococcus aureus (strain Mu3 / ATCC 700698)STAA101871  UniProtKB/Swiss-Prot DNLJ_STAA1  DNA ligase
[B] Staphylococcus aureus (strain Mu50 / ATCC 700699)STAAM01888  UniProtKB/Swiss-Prot DNLJ_STAAM  SAV1904 polydeoxyribonucleotide syntase [NAD+] DNA ligase
[B] Staphylococcus aureus (strain N315)STAAN01754  UniProtKB/Swiss-Prot DNLJ_STAAN  DNA ligase (polydeoxyribonucleotide syntase)
[B] Staphylococcus aureus (strain NCTC 8325)STAA802000  UniProtKB/Swiss-Prot DNLJ_STAA8  DNA ligase, NAD-dependent
[B] Staphylococcus aureus (strain Newman)STAAE01799  UniProtKB/Swiss-Prot DNLJ_STAAE  DNA ligase
[B] Staphylococcus aureus (strain USA300 / TCH1516)STAAT01860  UniProtKB/Swiss-Prot DNLJ_STAAT  DNA ligase (NAD(+))
[B] Staphylococcus aureus (strain USA300)STAA301812  UniProtKB/Swiss-Prot DNLJ_STAA3  DNA ligase identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Staphylococcus aureus (strain bovine RF122)STAAB01830  UniProtKB/Swiss-Prot DNLJ_STAAB  DNA ligase
[B] Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)STAS100886  UniProtKB/Swiss-Prot DNLJ_STAS1  similar to gi|27468507|ref|NP_765144.1| [Staphylococcus epidermidis ATCC 12228], percent identity 82 in 665 aa, BLASTP E(): 0.0 NAD-dependent DNA ligase
[B] Anaerocellum thermophilum (strain DSM 6725 / Z-1320)ANATD01532  UniProtKB/Swiss-Prot DNLJ_ANATD  DNA ligase, NAD-dependent
[B] Alkaliphilus metalliredigens (strain QYMF)ALKMQ00859  UniProtKB/Swiss-Prot DNLJ_ALKMQ  DNA ligase, NAD-dependent
[B] Alkaliphilus oremlandii (strain OhILAs)ALKOO00539  UniProtKB/Swiss-Prot DNLJ_ALKOO  DNA ligase, NAD-dependent
[B] Clostridium acetobutylicumCLOAB02631  UniProtKB/Swiss-Prot DNLJ2_CLOAB  NAD-dependent DNA ligase
[B] Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)CLOB800348  UniProtKB/Swiss-Prot DNLJ_CLOB8  DNA ligase, NAD-dependent
[B] Clostridium botulinum (strain ATCC 19397 / Type A)CLOB103176  UniProtKB/Swiss-Prot DNLJ_CLOB1  DNA ligase, NAD-dependent
[B] Clostridium botulinum (strain Alaska E43 / type E3)CLOBA00362  UniProtKB/Swiss-Prot DNLJ_CLOBA  DNA ligase, NAD-dependent
[B] Clostridium botulinum (strain Eklund 17B / type B)CLOBB00378  UniProtKB/Swiss-Prot DNLJ_CLOBB  DNA ligase, NAD-dependent
[B] Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)CLOBH03274  UniProtKB/Swiss-Prot DNLJ_CLOBH  DNA ligase
[B] Clostridium botulinum (strain Langeland / NCTC 10281 / Type F)CLOBL03246  UniProtKB/Swiss-Prot DNLJ_CLOBL  DNA ligase, NAD-dependent
[B] Clostridium botulinum (strain Loch Maree / Type A3)CLOBM03251  UniProtKB/Swiss-Prot DNLJ_CLOBM  DNA ligase, NAD-dependent
[B] Clostridium botulinum (strain Okra / Type B1)CLOBK03267  UniProtKB/Swiss-Prot DNLJ_CLOBK  DNA ligase, NAD-dependent
[B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE01868  UniProtKB/Swiss-Prot DNLJ_CLOCE  DNA ligase, NAD-dependent KEGG: cpy:Cphy_2927 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
[B] Clostridium difficile (strain 630)CLOD603349  UniProtKB/Swiss-Prot DNLJ_CLOD6  DNA ligase
[B] Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)CLOK503319  UniProtKB/Swiss-Prot DNLJ_CLOK5  LigA1
[B] Clostridium novyi (strain NT)CLONN01915  UniProtKB/Swiss-Prot DNLJ_CLONN  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Clostridium perfringensCLOPE02259  UniProtKB/Swiss-Prot DNLJ_CLOPE  DNA ligase
[B] Clostridium perfringens (strain ATCC 13124 / NCTC 8237)CLOP102454  UniProtKB/Swiss-Prot DNLJ_CLOP1  DNA ligase, NAD-dependent identified by similarity to SP:O87703; match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Clostridium perfringens (strain SM101)CLOPS02159  UniProtKB/Swiss-Prot DNLJ_CLOPS  DNA ligase, NAD-dependent identified by similarity to SP:O87703; match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH02882  UniProtKB/Swiss-Prot DNLJ_CLOPH  DNA ligase, NAD-dependent
[B] Clostridium tetaniCLOTE02125  UniProtKB/Swiss-Prot DNLJ_CLOTE  NAD-dependent DNA ligase
[B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH00994  UniProtKB/Swiss-Prot DNLJ_CLOTH  DNA ligase, NAD-dependent
[B] Finegoldia magna (strain ATCC 29328)FINM200569  UniProtKB/Swiss-Prot DNLJ_FINM2  NAD-dependent DNA ligase
[B] Heliobacterium modesticaldum (strain ATCC 51547 / Ice1)HELMI02828  UniProtKB/Swiss-Prot DNLJ_HELMI  DNA ligase, nad-dependent
[B] Desulforudis audaxviator (strain MP104C)DESAP01532  UniProtKB/Swiss-Prot DNLJ_DESAP  DNA ligase, NAD-dependent
[B] Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)CARHZ01070  UniProtKB/Swiss-Prot DNLJ_CARHZ  identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Desulfitobacterium hafniense (strain Y51)DESHY03852  UniProtKB/Swiss-Prot DNLJ_DESHY  hypothetical protein similarity to COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)(Evalue: 0)
[B] Desulfotomaculum reducens (strain MI-1)DESRM02246  UniProtKB/Swiss-Prot DNLJ_DESRM  DNA ligase, NAD-dependent
[B] Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)PELTS02486  UniProtKB/Swiss-Prot DNLJ_PELTS  NAD-dependent DNA ligase
[B] Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)CALS801609  UniProtKB/Swiss-Prot DNLJ_CALS8  DNA ligase, NAD-dependent
[B] Syntrophomonas wolfei subsp. wolfei (strain Goettingen)SYNWW00342  UniProtKB/Swiss-Prot DNLJ_SYNWW  DNA ligase
[B] Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)HALOH00216  UniProtKB/Swiss-Prot DNLJ_HALOH  DNA ligase
[B] Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)NATTJ00449  UniProtKB/Swiss-Prot DNLJ_NATTJ  DNA ligase, NAD-dependent
[B] Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)THEP301613  UniProtKB/Swiss-Prot DNLJ_THEP3  DNA ligase, NAD-dependent
[B] Thermoanaerobacter sp. (strain X514)THEPX00514  UniProtKB/Swiss-Prot DNLJ_THEPX  DNA ligase, NAD-dependent
[B] Thermoanaerobacter tengcongensisTHETN00545  UniProtKB/Swiss-Prot DNLJ_THETN  Best Blastp hit = gi|7673996|sp|O87703|DNLJ_BACST DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) gi|3688229|emb|CAA09732.1| (AJ011676) DNA ligase [Bacillus stearothermophilus], score 712, E-value 0 NAD-dependent DNA ligase (contains BRCT domain type II)
[B] Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)COPPD00130  UniProtKB/Swiss-Prot DNLJ_COPPD  DNA ligase, NAD-dependent
[B] Enterococcus faecalisENTFA00648  UniProtKB/Swiss-Prot DNLJ_ENTFA  DNA ligase
[B] Lactobacillus acidophilusLACAC00502  UniProtKB/Swiss-Prot DNLJ_LACAC  DNA ligase
[B] Lactobacillus brevis (strain ATCC 367 / JCM 1170)LACBA01519  UniProtKB/Swiss-Prot DNLJ_LACBA  NAD-dependent DNA ligase
[B] Lactobacillus casei (strain ATCC 334)LACC300946  UniProtKB/Swiss-Prot DNLJ_LACC3  NAD-dependent DNA ligase
[B] Lactobacillus casei (strain BL23)LACCB01145  UniProtKB/Swiss-Prot DNLJ_LACCB  DNA ligase
[B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081)LACDA00450  UniProtKB/Swiss-Prot DNLJ_LACDA  NAD-dependent DNA ligase
[B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365)LACDB00364  UniProtKB/Swiss-Prot DNLJ_LACDB  NAD-dependent DNA ligase
[B] Lactobacillus fermentum (strain IFO 3956 / LMG 18251)LACF301453  UniProtKB/Swiss-Prot DNLJ_LACF3  NAD-dependent DNA ligase
[B] Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)LACGA01392  UniProtKB/Swiss-Prot DNLJ_LACGA  NAD-dependent DNA ligase
[B] Lactobacillus helveticus (strain DPC 4571)LACH400429  UniProtKB/Swiss-Prot DNLJ_LACH4  DNA ligase
[B] Lactobacillus johnsoniiLACJO01505  UniProtKB/Swiss-Prot DNLJ_LACJO  NAD-dependent DNA ligase
[B] Lactobacillus plantarumLACPL00959  UniProtKB/Swiss-Prot DNLJ_LACPL  DNA ligase (NAD+)
[B] Lactobacillus reuteri (strain DSM 20016)LACRD01379  UniProtKB/Swiss-Prot DNLJ_LACRD  DNA ligase
[B] Lactobacillus reuteri (strain JCM 1112)LACRJ01328  UniProtKB/Swiss-Prot DNLJ_LACRJ  NAD-dependent DNA ligase
[B] Lactobacillus sakei subsp. sakei (strain 23K)LACSS01539  UniProtKB/Swiss-Prot DNLJ_LACSS  NAD-dependent DNA ligase
[B] Lactobacillus salivarius subsp. salivarius (strain UCC118)LACS101319  UniProtKB/Swiss-Prot DNLJ_LACS1  NAD-dependent DNA ligase COG0272 [L] NAD-dependent DNA ligase (contains BRCT domain type II)
[B] Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)PEDPA01522  UniProtKB/Swiss-Prot DNLJ_PEDPA  NAD-dependent DNA ligase
[B] Leuconostoc citreum (strain KM20)LEUCK00473  UniProtKB/Swiss-Prot DNLJ_LEUCK  DNA ligase, NAD-dependent
[B] Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523)LEUMM00510  UniProtKB/Swiss-Prot DNLJ_LEUMM  NAD-dependent DNA ligase
[B] Oenococcus oeni (strain BAA-331 / PSU-1)OENOB00377  UniProtKB/Swiss-Prot DNLJ_OENOB  NAD-dependent DNA ligase
[B] Lactococcus lactis subsp. cremoris (strain MG1363)LACLM00433  UniProtKB/Swiss-Prot DNLJ_LACLM  DNA ligase
[B] Lactococcus lactis subsp. cremoris (strain SK11)LACLS00429  UniProtKB/Swiss-Prot DNLJ_LACLS  NAD-dependent DNA ligase
[B] Lactococcus lactis subsp. lactisLACLA00405  UniProtKB/Swiss-Prot DNLJ_LACLA  DNA ligase
[B] Streptococcus agalactiae (serotype III)STRA300817  UniProtKB/Swiss-Prot DNLJ_STRA3  similar to DNA ligase Unknown
[B] Streptococcus agalactiae (serotype V)STRA500825  UniProtKB/Swiss-Prot DNLJ_STRA5  identified by match to PFAM protein family HMM PF00533 DNA ligase, NAD-dependent
[B] Streptococcus agalactiae serotype IaSTRA100859  UniProtKB/Swiss-Prot DNLJ_STRA1  identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Streptococcus equi subsp. equi (strain 4047)STRE400820  UniProtKB/Swiss-Prot DNLJ_STRE4  DNA ligase
[B] Streptococcus equi subsp. zooepidemicus (strain H70)STRS701172  UniProtKB/TrEMBL C0MH83  DNA ligase Ortholog of S. equi 4047 (FM204883) SEQ0906
[B] Streptococcus equi subsp. zooepidemicus (strain MGCS10565)STREM00745  UniProtKB/Swiss-Prot DNLJ_STREM  DNA ligase LigA
[B] Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288)STRGC01348  UniProtKB/Swiss-Prot DNLJ_STRGC  DNA ligase, NAD-dependent
[B] Streptococcus mutansSTRMU01388  UniProtKB/Swiss-Prot DNLJ_STRMU  Best Blastp Hit: sp|O87703|DNLJ_BACST DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) >gi|3688229|emb|CAA09732.1| (AJ011676) DNA ligase [Bacillus stearothermophilus] DNA ligase
[B] Streptococcus pneumoniaeSTRPN01027  UniProtKB/Swiss-Prot DNLJ_STRPN  identified by match to PFAM protein family HMM PF01653 DNA ligase, NAD-dependent
[B] Streptococcus pneumoniae (strain ATCC BAA-255 / R6)STRR601018  UniProtKB/Swiss-Prot DNLJ_STRR6  DNA ligase
[B] Streptococcus pneumoniae (strain CGSP14)STRPS01148  UniProtKB/Swiss-Prot DNLJ_STRPS  DNA ligase
[B] Streptococcus pneumoniae (strain Hungary19A-6)STRPI01101  UniProtKB/Swiss-Prot DNLJ_STRPI  DNA ligase, NAD-dependent
[B] Streptococcus pneumoniae (strain JJA)STRZJ00997  UniProtKB/Swiss-Prot DNLJ_STRZJ  DNA ligase, NAD-dependent
[B] Streptococcus pneumoniae (strain P1031)STRZP01018  UniProtKB/Swiss-Prot DNLJ_STRZP  DNA ligase, NAD-dependent
[B] Streptococcus pneumoniae serotype 19F (strain G54)STRP401014  UniProtKB/Swiss-Prot DNLJ_STRP4  DNA ligase, NAD-dependent
[B] Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)STRP200940  UniProtKB/Swiss-Prot DNLJ_STRP2  DNA ligase, NAD-dependent equivalent gene in S.pneumoniae TIGR4 = SP1117; equivalent gene in S.pneumoniae R6 = spr1024; identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Streptococcus pyogenes (serotype M18)STRP800637  UniProtKB/Swiss-Prot DNLJ_STRP8  best blastp match gb|AAK33695.1| (AE006527) putative DNA ligase [Streptococcus pyogenes M1 GAS] putative DNA ligase
[B] Streptococcus pyogenes (serotype M3)STRP300490  UniProtKB/Swiss-Prot DNLJ_STRP3  best blastp hit: gb|AAK33695.1| (AE006527) putative DNA ligase [Streptococcus pyogenes M1 GAS] putative DNA ligase
[B] Streptococcus pyogenes (serotype M6)STRP600587  UniProtKB/Swiss-Prot DNLJ_STRP6  NAD-dependent DNA ligase
[B] Streptococcus pyogenes serotype M1STRP101097  UniProtKB/Swiss-Prot DNLJ_STRP1  DNA ligase
[B] Streptococcus pyogenes serotype M12 (strain MGAS2096)STRPB00623  UniProtKB/Swiss-Prot DNLJ_STRPB  NAD-dependent DNA ligase
[B] Streptococcus pyogenes serotype M12 (strain MGAS9429)STRPC00619  UniProtKB/Swiss-Prot DNLJ_STRPC  NAD-dependent DNA ligase
[B] Streptococcus pyogenes serotype M2 (strain MGAS10270)STRPD00612  UniProtKB/Swiss-Prot DNLJ_STRPD  NAD-dependent DNA ligase
[B] Streptococcus pyogenes serotype M28STRPM00546  UniProtKB/Swiss-Prot DNLJ_STRPM  NAD-dependent DNA ligase
[B] Streptococcus pyogenes serotype M4 (strain MGAS10750)STRPF00645  UniProtKB/Swiss-Prot DNLJ_STRPF  NAD-dependent DNA ligase
[B] Streptococcus pyogenes serotype M49 (strain NZ131)STRPZ00541  UniProtKB/Swiss-Prot DNLJ_STRPZ  DNA ligase
[B] Streptococcus pyogenes serotype M5 (strain Manfredo)STRPG01205  UniProtKB/Swiss-Prot DNLJ_STRPG  DNA ligase
[B] Streptococcus sanguinis (strain SK36)STRSV01406  UniProtKB/Swiss-Prot DNLJ_STRSV  DNA ligase, putative
[B] Streptococcus suis (strain 05ZYH33)STRSY01166  UniProtKB/Swiss-Prot DNLJ_STRSY  NAD-dependent DNA ligase
[B] Streptococcus suis (strain 98HAH33)STRS201185  UniProtKB/Swiss-Prot DNLJ_STRS2  NAD-dependent DNA ligase
[B] Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)STRT201413  UniProtKB/Swiss-Prot DNLJ_STRT2  DNA ligase
[B] Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9)STRTD01261   ABJ66666.1  NAD-dependent DNA ligase
[B] Streptococcus thermophilus (strain CNRZ 1066)STRT101454  UniProtKB/Swiss-Prot DNLJ_STRT1  DNA ligase
[B] Fusobacterium nucleatum subsp. nucleatumFUSNN00210  UniProtKB/Swiss-Prot DNLJ_FUSNN  DNA ligase
[B] Rhodopirellula balticaRHOBA05862  UniProtKB/Swiss-Prot DNLJ_RHOBA  PMID: 10407164 PMID: 10368271 best DB hits: BLAST: swissprot:O87703; DNLJ_BACST DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-135 swissprot:O31498; DNLJ_BACSU DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-135 swissprot:P15042; DNLJ_ECOLI DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-133 COG: BS_yerG; COG0272 NAD-dependent DNA ligase (contains BRCT domain type; E=1e-136 lig; COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); E=1e-134 BH0649; COG0272 NAD-dependent DNA ligase (contains BRCT domain type; E=1e-134 PFAM: PF01653; NAD-dependent DNA ligase; E=4.3e-103 PF00633; Helix-hairpin-helix motif.; E=0.3 PF00533; BRCA1 C Terminus (BRCT) domain; E=9.8e-16 DNA ligase
[B] Caulobacter crescentusCAUCR01500  UniProtKB/Swiss-Prot DNLJ_CAUCR  DNA ligase
[B] Caulobacter sp. (strain K31)CAUSK03036  UniProtKB/Swiss-Prot DNLJ_CAUSK  DNA ligase, NAD-dependent
[B] Phenylobacterium zucineum (strain HLK1)PHEZH02298  UniProtKB/Swiss-Prot DNLJ_PHEZH  DNA ligase, NAD-dependent
[B] Bartonella bacilliformis (strain ATCC 35685 / KC583)BARBK00849  UniProtKB/Swiss-Prot DNLJ_BARBK  DNA ligase, NAD-dependent
[B] Bartonella henselaeBARHE01054  UniProtKB/Swiss-Prot DNLJ_BARHE  DNA ligase
[B] Bartonella quintanaBARQU00845  UniProtKB/Swiss-Prot DNLJ_BARQU  DNA ligase
[B] Bartonella tribocorum (strain CIP 105476 / IBS 506)BART101263  UniProtKB/Swiss-Prot DNLJ_BART1  DNA ligase hypothetical protein
[B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII900694  UniProtKB/Swiss-Prot DNLJ_BEII9  DNA ligase, NAD-dependent
[B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)METSB03401  UniProtKB/Swiss-Prot DNLJ_METSB  DNA ligase, NAD-dependent
[B] Bradyrhizobium japonicumBRAJA06533  UniProtKB/Swiss-Prot DNLJ_BRAJA  DNA ligase
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB05746  UniProtKB/Swiss-Prot DNLJ_BRASB  DNA ligase (Polydeoxyribonucleotide synthase
[B] Bradyrhizobium sp. (strain ORS278)BRASO05330  UniProtKB/Swiss-Prot DNLJ_BRASO  DNA ligase
[B] Nitrobacter hamburgensis (strain X14 / DSM 10229)NITHX01197  UniProtKB/Swiss-Prot DNLJ_NITHX  DNA ligase, NAD-dependent
[B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN01004  UniProtKB/Swiss-Prot DNLJ_NITWN  NAD-dependent DNA ligase
[B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)OLICO01234  UniProtKB/Swiss-Prot DNLJ_OLICO  DNA ligase, NAD-dependent
[B] Rhodopseudomonas palustrisRHOPA03504   NP_948855.1  DNA ligase
[B] Rhodopseudomonas palustris (strain BisA53)RHOP502090   ABJ06065.1  DNA ligase, NAD-dependent KEGG: rpb:RPB_2008 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS03358  UniProtKB/Swiss-Prot DNLJ_RHOPS  DNA ligase, NAD-dependent
[B] Rhodopseudomonas palustris (strain HaA2)RHOP202003  UniProtKB/Swiss-Prot DNLJ_RHOP2  DNA ligase, NAD-dependent
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT03965  UniProtKB/Swiss-Prot DNLJ_RHOPT  DNA ligase, NAD-dependent
[B] Brucella abortusBRUAB01314  UniProtKB/Swiss-Prot DNLJ_BRUAB  similar to BR1420, DNA ligase, NAD-dependent LigA, DNA ligase, NAD-dependent
[B] Brucella abortus (strain 2308)BRUA201425  UniProtKB/Swiss-Prot DNLJ_BRUA2  BRCT domain:NAD-dependent DNA ligase:ATP/GTP-binding site motif A (P-loop):Zn-finger in NAD-dependent DNA ligase, C4 type:NAD...
[B] Brucella abortus (strain S19)BRUA101272  UniProtKB/Swiss-Prot DNLJ_BRUA1  DNA ligase
[B] Brucella canis (strain ATCC 23365 / NCTC 10854)BRUC201368  UniProtKB/Swiss-Prot DNLJ_BRUC2  DNA ligase, NAD-dependent
[B] Brucella melitensisBRUME00587  UniProtKB/Swiss-Prot DNLJ_BRUME  NAD-DEPENDENT DNA LIGASE
[B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO201221  UniProtKB/Swiss-Prot DNLJ_BRUO2  DNA ligase, NAD-dependent
[B] Brucella suisBRUSU01367  UniProtKB/Swiss-Prot DNLJ_BRUSU  similar to GB:X12597, GB:L13805, SP:P09429, PID:1435197, PID:32327, and PID:968888; identified by sequence similarity; putative DNA ligase, NAD-dependent
[B] Brucella suis (strain ATCC 23445 / NCTC 10510)BRUSI01383  UniProtKB/Swiss-Prot DNLJ_BRUSI  DNA ligase, NAD-dependent GO_function: DNA ligase (NAD+) activity [GO ID 0003911]; GO_process: DNA repair [GO ID 0006281]
[B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)OCHA401730  UniProtKB/Swiss-Prot DNLJ_OCHA4  DNA ligase, NAD-dependent
[B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688)METC404881  UniProtKB/Swiss-Prot DNLJ_METC4  DNA ligase, NAD-dependent KEGG: mex:Mext_4642 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase
[B] Methylobacterium extorquens (strain PA1)METEP04574  UniProtKB/Swiss-Prot DNLJ_METEP  DNA ligase, NAD-dependent
[B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB05045  UniProtKB/Swiss-Prot DNLJ_METPB  DNA ligase, NAD-dependent
[B] Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)METRJ00011  UniProtKB/Swiss-Prot DNLJ_METRJ  DNA ligase, NAD-dependent
[B] Methylobacterium sp. (strain 4-46)METS401579  UniProtKB/Swiss-Prot DNLJ_METS4  DNA ligase, NAD-dependent
[B] Mesorhizobium sp. (strain BNC1)MESSB01984  UniProtKB/Swiss-Prot DNLJ_MESSB  DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT NAD-dependent DNA ligase NAD-dependent DNA ligase, OB-fold KEGG: bja:bll6591 DNA ligase
[B] Rhizobium lotiRHILO01207  UniProtKB/Swiss-Prot DNLJ_RHILO  DNA ligase
[B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL102363  UniProtKB/Swiss-Prot DNLJ_PARL1  DNA ligase, NAD-dependent
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK02238  UniProtKB/Swiss-Prot DNLJ_AGRRK  DNA ligase, NAD-dependent
[B] Agrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT502029  UniProtKB/Swiss-Prot DNLJ_AGRT5  DNA ligase
[B] Rhizobium etli (strain CFN 42 / ATCC 51251)RHIEC02767  UniProtKB/Swiss-Prot DNLJ_RHIEC  DNA ligase (NAD+) protein similar to LigA [Zymomonas mobilis] and ligA (SMc01878) [Sinorhizobium meliloti] Similar to entrez-protein:P28719 Putative location:bacterial cytoplasm Psort-Score: 0.3209; go_component: intracellular [goid 0005622]; go_function: DNA binding [goid 0003677]; go_function: ligase activity [goid 0016874]; go_function: DNA ligase (NAD+) activity [goid 0003911]; go_process: DNA replication [goid 0006260]; go_process: DNA repair [goid 0006281]
[B] Rhizobium etli (strain CIAT 652)RHIE602942  UniProtKB/Swiss-Prot DNLJ_RHIE6  DNA ligase (NAD+) protein
[B] Rhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW02539  UniProtKB/Swiss-Prot DNLJ_RHILW  DNA ligase
[B] Rhizobium leguminosarum bv. viciae (strain 3841)RHIL303282  UniProtKB/Swiss-Prot DNLJ_RHIL3  putative DNA ligase similarity:fasta; with=UniProt:DNLJ_ECOLI (EMBL:ECD870); Escherichia coli.; ligA; DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]).; length=671; id 47.117; 711 aa overlap; query 13-716; subject 1-669 similarity:fasta; with=UniProt:Q92NM8_RHIME (EMBL:SME591789); Rhizobium meliloti (Sinorhizobium meliloti).; PROBABLE DNA LIGASE PROTEIN (EC 6.5.1.2).; length=717; id 79.109; 718 aa overlap; query 1-718; subject 1-717
[B] Rhizobium melilotiRHIME02140  UniProtKB/Swiss-Prot DNLJ_RHIME  Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DNA LIGASE PROTEIN
[B] Sinorhizobium medicae (strain WSM419)SINMW02021  UniProtKB/Swiss-Prot DNLJ_SINMW  DNA ligase
[B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC500149  UniProtKB/Swiss-Prot DNLJ_AZOC5  NAD-dependent DNA ligase
[B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP201701  UniProtKB/Swiss-Prot DNLJ_XANP2  DNA ligase, NAD-dependent
[B] Hyphomonas neptunium (strain ATCC 15444)HYPNA00382  UniProtKB/Swiss-Prot DNLJ_HYPNA  DNA ligase, NAD-dependent
[B] Maricaulis maris (strain MCS10)MARMM02060  UniProtKB/Swiss-Prot DNLJ_MARMM  DNA ligase, NAD-dependent
[B] Dinoroseobacter shibae (strain DFL 12)DINSH01493  UniProtKB/Swiss-Prot DNLJ_DINSH  DNA ligase, NAD-dependent
[B] Jannaschia sp. (strain CCS1)JANSC02496  UniProtKB/Swiss-Prot DNLJ_JANSC  DNA ligase, NAD-dependent
[B] Paracoccus denitrificans (strain Pd 1222)PARDP03971  UniProtKB/Swiss-Prot DNLJ_PARDP  DNA ligase, NAD-dependent KEGG: sil:SPO1680 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: NAD-dependent DNA ligase-like
[B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS401209  UniProtKB/Swiss-Prot DNLJ_RHOS4  From CDD: NAD-dependent DNA ligase (contains BRCT domain type II) Citation: Wilkinson A, Day J, Bowater R. Bacterial DNA ligases. Mol Microbiol. 2001 Jun;40(6):1241-8. Review. PMID: 11442824 DNA ligase
[B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS501127  UniProtKB/Swiss-Prot DNLJ_RHOS5  DNA ligase, NAD-dependent
[B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS101253  UniProtKB/Swiss-Prot DNLJ_RHOS1  DNA ligase, NAD-dependent KEGG: rsp:RSP_2622 DNA ligase TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: NAD-dependent DNA ligase-like
[B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK00919  UniProtKB/Swiss-Prot DNLJ_RHOSK  DNA ligase
[B] Roseobacter denitrificans (strain ATCC 33942 / OCh 114)ROSDO02409  UniProtKB/Swiss-Prot DNLJ_ROSDO  DNA ligase, NAD-dependent
[B] Silicibacter pomeroyiSILPO01643  UniProtKB/Swiss-Prot DNLJ_SILPO  identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Silicibacter sp. (strain TM1040)SILST01396  UniProtKB/Swiss-Prot DNLJ_SILST  DNA ligase, NAD-dependent KEGG: sil:SPO1680 DNA ligase, NAD-dependent, ev=0.0, 75% identity TIGRFAM: DNA ligase, NAD-dependent: (4.1e-283) PFAM: BRCT: (1.9e-17) NAD-dependent DNA ligase: (2.1e-140) zinc-finger, NAD-dependent DNA ligase C4-type: (2.5e-10) NAD-dependent DNA ligase, OB-fold: (1.9e-38)
[B] Acidiphilium cryptum (strain JF-5)ACICJ00741  UniProtKB/Swiss-Prot DNLJ_ACICJ  DNA ligase, NAD-dependent
[B] Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA03120  UniProtKB/Swiss-Prot DNLJ_GLUDA  Putative DNA ligase
[B] Granulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)GRABC00419  UniProtKB/Swiss-Prot DNLJ_GRABC  NAD-dependent DNA ligase
[B] Rhodospirillum centenum (strain ATCC 51521 / SW)RHOCS00580  UniProtKB/Swiss-Prot DNLJ_RHOCS  DNA ligase, NAD-dependent
[B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT00933  UniProtKB/Swiss-Prot DNLJ_RHORT  DNA ligase (NAD+)
[B] Neorickettsia sennetsu (strain Miyayama)NEOSM00480  UniProtKB/Swiss-Prot DNLJ_NEOSM  DNA ligase, NAD-dependent identified by similarity to SP:O87703; match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Rickettsia akari (strain Hartford)RICAH01013  UniProtKB/Swiss-Prot DNLJ_RICAH  DNA ligase
[B] Rickettsia bellii (strain OSU 85-389)RICB801241  UniProtKB/Swiss-Prot DNLJ_RICB8  DNA ligase
[B] Rickettsia bellii (strain RML369-C)RICBR00191  UniProtKB/Swiss-Prot DNLJ_RICBR  DNA ligase, NAD-dependent
[B] Rickettsia canadensis (strain McKiel)RICCK00913  UniProtKB/Swiss-Prot DNLJ_RICCK  DNA ligase
[B] Rickettsia felisRICFE00184  UniProtKB/TrEMBL Q4UN15  DNA ligase, NAD-dependent
[B] Rickettsia massiliae (strain Mtu5)RICM500781  UniProtKB/Swiss-Prot DNLJ_RICM5  DNA ligase
[B] Rickettsia prowazekiiRICPR00678  UniProtKB/Swiss-Prot DNLJ_RICPR  DNA LIGASE (lig)
[B] Rickettsia rickettsii (strain Iowa)RICRO01119  UniProtKB/Swiss-Prot DNLJ_RICRO  NAD-dependent DNA ligase
[B] Rickettsia rickettsii (strain Sheila Smith)RICRS01081  UniProtKB/Swiss-Prot DNLJ_RICRS  DNA ligase
[B] Rickettsia typhiRICTY00675  UniProtKB/Swiss-Prot DNLJ_RICTY  DNA ligase (NAD+)
[B] Erythrobacter litoralis (strain HTCC2594)ERYLH01437  UniProtKB/Swiss-Prot DNLJ_ERYLH  DNA ligase COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)
[B] Novosphingobium aromaticivorans (strain DSM 12444)NOVAD01721  UniProtKB/Swiss-Prot DNLJ_NOVAD  DNA ligase
[B] Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)SPHWW04669  UniProtKB/Swiss-Prot DNLJ_SPHWW  DNA ligase, NAD-dependent
[B] Sphingopyxis alaskensisSPHAL00542  UniProtKB/Swiss-Prot DNLJ_SPHAL  DNA ligase, NAD-dependent
[B] Bordetella avium (strain 197N)BORA101057  UniProtKB/Swiss-Prot DNLJ_BORA1  DNA ligase
[B] Bordetella bronchisepticaBORBR03763  UniProtKB/Swiss-Prot DNLJ_BORBR  ortholog of Bordetella pertussis (BX470248) BP3560 DNA ligase
[B] Bordetella parapertussisBORPA03305  UniProtKB/Swiss-Prot DNLJ_BORPA  ortholog of Bordetella pertussis (BX470248) BP3560 DNA ligase
[B] Bordetella pertussisBORPE03252  UniProtKB/Swiss-Prot DNLJ_BORPE  Similar to Escherichia coli DNA ligase LigA SW:DNLJ_ECOLI (P15042) (671 aa) fasta scores: E(): 3e-82, 54.4% id in 693 aa, and to Alteromonas haloplanktis DNA ligase TR:Q9RBF2 (EMBL:AF126866) (672 aa) fasta scores: E(): 2.1e-81, 53.92% id in 688 aa DNA ligase
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD01657  UniProtKB/Swiss-Prot DNLJ_BORPD  DNA ligase
[B] Burkholderia ambifaria (strain MC40-6)BURA401900  UniProtKB/Swiss-Prot DNLJ_BURA4  DNA ligase, NAD-dependent
[B] Burkholderia cenocepacia (strain AU 1054)BURCA05975   ABF80918.1  DNA ligase, NAD-dependent precursor
[B] Burkholderia cenocepacia (strain HI2424)BURCH02011  UniProtKB/Swiss-Prot DNLJ_BURCH  DNA ligase, NAD-dependent KEGG: bcn:Bcen_6053 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold SMART: Helix-hairpin-helix DNA-binding, class 1
[B] Burkholderia cenocepacia (strain MC0-3)BURCC02018  UniProtKB/Swiss-Prot DNLJ_BURCC  DNA ligase, NAD-dependent
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM02046  UniProtKB/Swiss-Prot DNLJ_BURCM  DNA ligase, NAD-dependent KEGG: bur:Bcep18194_A5334 DNA ligase (NAD+) TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold SMART: Helix-hairpin-helix DNA-binding, class 1
[B] Burkholderia cepacia (strain J2315 / LMG 16656)BURCJ01997  UniProtKB/Swiss-Prot DNLJ_BURCJ  DNA ligase
[B] Burkholderia multivorans (strain ATCC 17616 / 249)BURM102205  UniProtKB/Swiss-Prot DNLJ_BURM1  DNA ligase, NAD-dependent
[B] Burkholderia sp. (strain 383)BURS302141  UniProtKB/Swiss-Prot DNLJ_BURS3  DNA ligase (NAD+)
[B] Burkholderia vietnamiensis (strain G4 / LMG 22486)BURVG01859  UniProtKB/Swiss-Prot DNLJ_BURVG  DNA ligase, NAD-dependent
[B] Burkholderia malleiBURMA01265  UniProtKB/Swiss-Prot DNLJ_BURMA  DNA ligase, NAD-dependent
[B] Burkholderia mallei (strain NCTC 10229)BURM903053  UniProtKB/Swiss-Prot DNLJ_BURM9  DNA ligase, NAD-dependent
[B] Burkholderia mallei (strain NCTC 10247)BURM701249  UniProtKB/Swiss-Prot DNLJ_BURM7  DNA ligase, NAD-dependent
[B] Burkholderia mallei (strain SAVP1)BURMS01937  UniProtKB/Swiss-Prot DNLJ_BURMS  DNA ligase, NAD-dependent
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP801327  UniProtKB/Swiss-Prot DNLJ_BURP8  DNA ligase, NAD-dependent
[B] Burkholderia phytofirmans (strain DSM 17436 / PsJN)BURPP02383  UniProtKB/Swiss-Prot DNLJ_BURPP  DNA ligase, NAD-dependent
[B] Burkholderia pseudomalleiBURPS02170  UniProtKB/Swiss-Prot DNLJ_BURPS  Similar to Escherichia coli DNA ligase LigA or Lig or DnaI or PdeC or Lop or b2411 SWALL:DNLJ_ECOLI (SWALL:P15042) (671 aa) fasta scores: E(): 4.8e-141, 57.84% id in 669 aa, and to Yersinia pestis DNA ligase LigA or ypo2989 SWALL:Q8ZCJ6 (EMBL:AJ414154) (670 aa) fasta scores: E(): 6e-139, 57.33% id in 668 aa. Note: This CDS is longer in its N-terminal region than most of its database matches DNA ligase
[B] Burkholderia pseudomallei (strain 1106a)BURP002462  UniProtKB/Swiss-Prot DNLJ_BURP0  DNA ligase, NAD-dependent
[B] Burkholderia pseudomallei (strain 1710b)BURP102540  UniProtKB/Swiss-Prot DNLJ_BURP1  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Burkholderia pseudomallei (strain 668)BURP602416  UniProtKB/Swiss-Prot DNLJ_BURP6  DNA ligase
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA01954  UniProtKB/Swiss-Prot DNLJ_BURTA  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Burkholderia xenovorans (strain LB400)BURXL02663  UniProtKB/Swiss-Prot DNLJ_BURXL  NAD-dependent DNA ligase
[B] Cupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR01647  UniProtKB/Swiss-Prot DNLJ_CUPTR  DNA ligase
[B] Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)RALEH02004  UniProtKB/Swiss-Prot DNLJ_RALEH  NAD-dependent DNA ligase
[B] Ralstonia eutropha (strain JMP134)RALEJ01861  UniProtKB/Swiss-Prot DNLJ_RALEJ  NAD-dependent DNA ligase
[B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME01411  UniProtKB/Swiss-Prot DNLJ_RALME  DNA ligase, NAD-dependent
[B] Polynucleobacter necessarius (strain STIR1)POLNS00435  UniProtKB/Swiss-Prot DNLJ_POLNS  DNA ligase, NAD-dependent
[B] Polynucleobacter sp. (strain QLW-P1DMWA-1)POLSQ01444  UniProtKB/Swiss-Prot DNLJ_POLSQ  DNA ligase, NAD-dependent
[B] Ralstonia pickettii (strain 12J)RALPJ01238  UniProtKB/Swiss-Prot DNLJ_RALPJ  DNA ligase, NAD-dependent
[B] Ralstonia solanacearumRALSO01394  UniProtKB/Swiss-Prot DNLJ_RALSO  Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) PROTEIN
[B] Acidovorax avenae subsp. citrulli (strain AAC00-1)ACIAC02717  UniProtKB/Swiss-Prot DNLJ_ACIAC  DNA ligase, NAD-dependent KEGG: rfr:Rfer_2201 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
[B] Acidovorax sp. (strain JS42)ACISJ01928  UniProtKB/Swiss-Prot DNLJ_ACISJ  DNA ligase, NAD-dependent KEGG: rfr:Rfer_2201 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
[B] Delftia acidovorans (strain DSM 14801 / SPH-1)DELAS03511  UniProtKB/Swiss-Prot DNLJ_DELAS  DNA ligase, NAD-dependent
[B] Diaphorobacter sp. (strain TPSY)DIAST01628  UniProtKB/Swiss-Prot DNLJ_DIAST  DNA ligase, NAD-dependent
[B] Polaromonas naphthalenivorans (strain CJ2)POLNA01768  UniProtKB/Swiss-Prot DNLJ_POLNA  DNA ligase, NAD-dependent
[B] Polaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ02534  UniProtKB/Swiss-Prot DNLJ_POLSJ  DNA ligase, NAD-dependent
[B] Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)RHOFD02147  UniProtKB/Swiss-Prot DNLJ_RHOFD  DNA ligase, NAD-dependent
[B] Verminephrobacter eiseniae (strain EF01-2)VEREI04338  UniProtKB/Swiss-Prot DNLJ_VEREI  DNA ligase, NAD-dependent
[B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP02480  UniProtKB/Swiss-Prot DNLJ_LEPCP  DNA ligase, NAD-dependent
[B] Methylibium petroleiphilum (strain PM1)METPP01773  UniProtKB/Swiss-Prot DNLJ_METPP  DNA ligase
[B] Herminiimonas arsenicoxydansHERAR01255  UniProtKB/Swiss-Prot DNLJ_HERAR  DNA ligase
[B] Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis)JANMA02064  UniProtKB/Swiss-Prot DNLJ_JANMA  DNA ligase
[B] Thiobacillus denitrificans (strain ATCC 25259)THIDA00623  UniProtKB/Swiss-Prot DNLJ_THIDA  NAD-dependent DNA ligase
[B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875)METFK01256  UniProtKB/Swiss-Prot DNLJ_METFK  DNA ligase, NAD-dependent
[B] Chromobacterium violaceumCHRVO03895  UniProtKB/Swiss-Prot DNLJ_CHRVO  identified by sequence similarity; putative; ORF located using Blastx/COG0272 DNA ligase
[B] Laribacter hongkongensis (strain HLHK9)LARHH02828  UniProtKB/Swiss-Prot DNLJ_LARHH  DnlJ
[B] Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)NEIG100214  UniProtKB/Swiss-Prot DNLJ_NEIG1  Best Blastp Hit: pir||F81172 DNA ligase NMB0666 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7225892|gb|AAF41084.1| (AE002421) DNA ligase [Neisseria meningitidis MC58] COG0272 NAD-dependent DNA ligase (contains BRCT putative DNA ligase
[B] Neisseria gonorrhoeae (strain NCCP11945)NEIG200359  UniProtKB/Swiss-Prot DNLJ_NEIG2  Putative DNA ligase
[B] Neisseria meningitidis serogroup ANEIMA00767  UniProtKB/Swiss-Prot DNLJ_NEIMA  Putative DNA ligase
[B] Neisseria meningitidis serogroup BNEIMB00624  UniProtKB/Swiss-Prot DNLJ_NEIMB  DNA ligase
[B] Neisseria meningitidis serogroup C (strain 053442)NEIM000574  UniProtKB/Swiss-Prot DNLJ_NEIM0  DNA ligase Code: L; COG: COG0272
[B] Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18)NEIMF00561  UniProtKB/Swiss-Prot DNLJ_NEIMF  Putative DNA ligase
[B] Nitrosomonas europaeaNITEU01704  UniProtKB/Swiss-Prot DNLJ_NITEU  NAD-dependent DNA ligase
[B] Nitrosomonas eutropha (strain C71)NITEC00889   ABI59206.1  DNA ligase, NAD-dependent KEGG: neu:NE1753 NAD-dependent DNA ligase TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold SMART: Helix-hairpin-helix DNA-binding, class 1
[B] Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)NITMU00626  UniProtKB/Swiss-Prot DNLJ_NITMU  DNA ligase, NAD-dependent
[B] Azoarcus sp. (strain BH72)AZOSB01993  UniProtKB/Swiss-Prot DNLJ_AZOSB  DNA ligase (NAD+) DNA ligase (Polydeoxyribonucleotide synthase [NAD+]). This protein catalyzes the formation of phosphodiester linkages between 5-phosphoryl and 3-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. TIGRFAM: dnlj: DNA ligase NAD-dependent. High confidence in function and specificity
[B] Azoarcus sp. (strain EbN1)AZOSE03541  UniProtKB/Swiss-Prot DNLJ_AZOSE  NAD-dependent DNA ligase
[B] Dechloromonas aromatica (strain RCB)DECAR01703  UniProtKB/Swiss-Prot DNLJ_DECAR  NAD-dependent DNA ligase
[B] Desulfococcus oleovorans (strain DSM 6200 / Hxd3)DESOH01704  UniProtKB/Swiss-Prot DNLJ_DESOH  DNA ligase, NAD-dependent
[B] Desulfovibrio desulfuricans (strain G20)DESDG02045  UniProtKB/Swiss-Prot DNLJ_DESDG  DNA ligase, NAD-dependent
[B] Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)DESVH01597  UniProtKB/Swiss-Prot DNLJ_DESVH  identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)GEOBB01316  UniProtKB/Swiss-Prot DNLJ_GEOBB  DNA ligase, NAD-dependent
[B] Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)GEOLS02853  UniProtKB/Swiss-Prot DNLJ_GEOLS  DNA ligase, NAD-dependent
[B] Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)GEOMG02638  UniProtKB/Swiss-Prot DNLJ_GEOMG  NAD-dependent DNA ligase C4-type
[B] Geobacter sulfurreducensGEOSL00877  UniProtKB/Swiss-Prot DNLJ_GEOSL  DNA ligase
[B] Geobacter uraniumreducens (strain Rf4)GEOUR01249  UniProtKB/Swiss-Prot DNLJ_GEOUR  DNA ligase, NAD-dependent
[B] Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)PELCD02352  UniProtKB/Swiss-Prot DNLJ_PELCD  DNA ligase, NAD-dependent
[B] Pelobacter propionicus (strain DSM 2379)PELPD02924  UniProtKB/Swiss-Prot DNLJ_PELPD  DNA ligase, NAD-dependent KEGG: nwi:Nwi_1062 NAD-dependent DNA ligase TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: NAD-dependent DNA ligase-like
[B] Anaeromyxobacter dehalogenans (strain 2CP-C)ANADE00690  UniProtKB/Swiss-Prot DNLJ_ANADE  DNA ligase, NAD-dependent
[B] Anaeromyxobacter sp. (strain Fw109-5)ANADF00728  UniProtKB/Swiss-Prot DNLJ_ANADF  DNA ligase, NAD-dependent
[B] Anaeromyxobacter sp. (strain K)ANASK00724  UniProtKB/Swiss-Prot DNLJ_ANASK  DNA ligase, NAD-dependent
[B] Myxococcus xanthus (strain DK 1622)MYXXD05410  UniProtKB/Swiss-Prot DNLJ_MYXXD  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Syntrophus aciditrophicus (strain SB)SYNAS01538  UniProtKB/Swiss-Prot DNLJ_SYNAS  NAD-dependent DNA ligase
[B] Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)SYNFM01408   ABK17119.1  DNA ligase, NAD-dependent KEGG: gsu:GSU0890 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
[B] Arcobacter butzleri (strain RM4018)ARCB401039  UniProtKB/Swiss-Prot DNLJ_ARCB4  DNA ligase
[B] Campylobacter concisus (strain 13826)CAMC101287  UniProtKB/Swiss-Prot DNLJ_CAMC1  DNA ligase, NAD-dependent
[B] Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)CAMHC00955  UniProtKB/Swiss-Prot DNLJ_CAMHC  DNA ligase, NAD-dependent
[B] Campylobacter jejuniCAMJE00551  UniProtKB/Swiss-Prot DNLJ_CAMJE  DNA ligase
[B] Campylobacter jejuni (strain RM1221)CAMJR00670  UniProtKB/Swiss-Prot DNLJ_CAMJR  identified by similarity to SP:O87703; match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)CAMJD00884  UniProtKB/Swiss-Prot DNLJ_CAMJD  DNA ligase, NAD-dependent
[B] Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)CAMJJ00558  UniProtKB/Swiss-Prot DNLJ_CAMJJ  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)CAMJ800542  UniProtKB/Swiss-Prot DNLJ_CAMJ8  DNA ligase
[B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)CAMLR00634  UniProtKB/Swiss-Prot DNLJ_CAMLR  DNA ligase
[B] Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251)SULDN01327  UniProtKB/Swiss-Prot DNLJ_SULDN  DNA ligase
[B] Wolinella succinogenesWOLSU01618  UniProtKB/Swiss-Prot DNLJ_WOLSU  DNA LIGASE POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]
[B] Sulfurovum sp. (strain NBC37-1)SULNB00460  UniProtKB/Swiss-Prot DNLJ_SULNB  DNA ligase, NAD-dependent
[B] Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)ACIF200719  UniProtKB/Swiss-Prot DNLJ_ACIF2  DNA ligase
[B] Acidithiobacillus ferrooxidans (strain ATCC 53993)ACIF500860  UniProtKB/Swiss-Prot DNLJ_ACIF5  DNA ligase, NAD-dependent
[B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)AERHH01187  UniProtKB/Swiss-Prot DNLJ_AERHH  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Aeromonas salmonicida (strain A449)AERS401090  UniProtKB/Swiss-Prot DNLJ_AERS4  NAD-dependent DNA ligase
[B] Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8)MARAV01105  UniProtKB/Swiss-Prot DNLJ_MARAV  DNA ligase, NAD-dependent KEGG: hch:HCH_04729 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
[B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD201867  UniProtKB/Swiss-Prot DNLJ_SACD2  DNA ligase (NAD+)
[B] Colwellia psychrerythraea (strain 34H / ATCC BAA-681)COLP303319  UniProtKB/Swiss-Prot DNLJ_COLP3  identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Idiomarina loihiensisIDILO01678  UniProtKB/Swiss-Prot DNLJ_IDILO  NAD-dependent DNA ligase
[B] Pseudoalteromonas atlantica (strain T6c / BAA-1087)PSEA601760  UniProtKB/Swiss-Prot DNLJ_PSEA6  DNA ligase, NAD-dependent
[B] Pseudoalteromonas haloplanktis (strain TAC 125)PSEHT01043  UniProtKB/Swiss-Prot DNLJ_PSEHT  Evidence 1 : Function experimentally demonstrated in the studied organism; PubMedId : 10848966; Product type e : enzyme NAD-dependent DNA ligase
[B] Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)SHEAM01507  UniProtKB/Swiss-Prot DNLJ_SHEAM  DNA ligase (NAD(+)) KEGG: son:SO2896 DNA ligase, NAD-dependent
[B] Shewanella baltica (strain OS185)SHEB802622  UniProtKB/Swiss-Prot DNLJ_SHEB8  DNA ligase, NAD-dependent
[B] Shewanella baltica (strain OS195)SHEB902696  UniProtKB/Swiss-Prot DNLJ_SHEB9  KEGG: shw:Sputw3181_1645 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase DNA ligase, NAD-dependent
[B] Shewanella baltica (strain OS223)SHEB201641  UniProtKB/Swiss-Prot DNLJ_SHEB2  DNA ligase
[B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)SHEDO02472  UniProtKB/Swiss-Prot DNLJ_SHEDO  DNA ligase, NAD-dependent
[B] Shewanella frigidimarina (strain NCIMB 400)SHEFN02419  UniProtKB/Swiss-Prot DNLJ_SHEFN  DNA ligase, NAD-dependent
[B] Shewanella halifaxensis (strain HAW-EB4)SHEHH02553  UniProtKB/Swiss-Prot DNLJ_SHEHH  DNA ligase, NAD-dependent
[B] Shewanella loihica (strain BAA-1088 / PV-4)SHELP02366  UniProtKB/Swiss-Prot DNLJ_SHELP  DNA ligase, NAD-dependent KEGG: shm:Shewmr7_1575 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: NAD-dependent DNA ligase-like
[B] Shewanella oneidensisSHEON02709  UniProtKB/Swiss-Prot DNLJ_SHEON  DNA ligase
[B] Shewanella pealeana (strain ANG-SQ1 / ATCC 700345)SHEPA01655  UniProtKB/Swiss-Prot DNLJ_SHEPA  KEGG: slo:Shew_2377 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase DNA ligase, NAD-dependent
[B] Shewanella piezotolerans (strain WP3 / JCM 13877)SHEPW01865  UniProtKB/Swiss-Prot DNLJ_SHEPW  DNA ligase
[B] Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)SHEPC02326  UniProtKB/Swiss-Prot DNLJ_SHEPC  DNA ligase, NAD-dependent
[B] Shewanella sediminis (strain HAW-EB3)SHESH01733  UniProtKB/Swiss-Prot DNLJ_SHESH  KEGG: slo:Shew_2377 DNA ligase, NAD-dependent DNA ligase (NAD(+))
[B] Shewanella sp. (strain ANA-3)SHESA01551   ABK47803.1  DNA ligase, NAD-dependent KEGG: son:SO2896 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold SMART: Helix-hairpin-helix DNA-binding, class 1
[B] Shewanella sp. (strain MR-4)SHESM01501   ABI38586.1  DNA ligase, NAD-dependent
[B] Shewanella sp. (strain MR-7)SHESR01561   ABI42573.1  DNA ligase, NAD-dependent
[B] Shewanella sp. (strain W3-18-1)SHESW01606  UniProtKB/Swiss-Prot DNLJ_SHESW  DNA ligase, NAD-dependent KEGG: son:SO2896 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
[B] Shewanella woodyi (strain ATCC 51908 / MS32)SHEWM02809  UniProtKB/Swiss-Prot DNLJ_SHEWM  DNA ligase, NAD-dependent
[B] Baumannia cicadellinicola (subsp. Homalodisca coagulata)BAUCH00065  UniProtKB/Swiss-Prot DNLJ_BAUCH  DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Dichelobacter nodosus (strain VCS1703A)DICNV00361  UniProtKB/Swiss-Prot DNLJ_DICNV  DNA ligase, NAD-dependent
[B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)NITOC01589  UniProtKB/Swiss-Prot DNLJ_NITOC  DNA ligase (NAD+)
[B] Alkalilimnicola ehrlichei (strain MLHE-1)ALHEH00675  UniProtKB/Swiss-Prot DNLJ_ALHEH  DNA ligase, NAD-dependent
[B] Halorhodospira halophila (strain DSM 244 / SL1)HALHL01845  UniProtKB/Swiss-Prot DNLJ_HALHL  DNA ligase, NAD-dependent
[B] Thioalkalivibrio sp. (strain HL-EbGR7)THISH01991  UniProtKB/Swiss-Prot DNLJ_THISH  DNA ligase
[B] Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)CITK800365  UniProtKB/Swiss-Prot DNLJ_CITK8  DNA ligase
[B] Enterobacter sakazakii (strain ATCC BAA-894)ENTS800799  UniProtKB/Swiss-Prot DNLJ_ENTS8  Putative uncharacterized protein
[B] Enterobacter sp. (strain 638)ENT3802911  UniProtKB/Swiss-Prot DNLJ_ENT38  DNA ligase, NAD-dependent
[B] Erwinia tasmaniensis (strain DSM 17950 / ET1/99)ERWT901102  UniProtKB/Swiss-Prot DNLJ_ERWT9  DNA ligase
[B] Escherichia coli (strain 55989 / EAEC)ECO5502612  UniProtKB/Swiss-Prot DNLJ_ECO55  DNA ligase
[B] Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)ECOLC01231  UniProtKB/Swiss-Prot DNLJ_ECOLC  DNA ligase, NAD-dependent
[B] Escherichia coli (strain DH10B)ECODH02265  UniProtKB/Swiss-Prot DNLJ_ECODH  DNA ligase, NAD(+)-dependent
[B] Escherichia coli (strain K12)ECOLI02336  UniProtKB/Swiss-Prot DNLJ_ECOLI  DNA ligase
[B] Escherichia coli (strain SE11)ECOSE02685  UniProtKB/Swiss-Prot DNLJ_ECOSE  DNA ligase
[B] Escherichia coli (strain SMS-3-5 / SECEC)ECOSM02466  UniProtKB/Swiss-Prot DNLJ_ECOSM  DNA ligase, NAD-dependent
[B] Escherichia coli (strain UTI89 / UPEC)ECOUT02686  UniProtKB/Swiss-Prot DNLJ_ECOUT  DNA ligase
[B] Escherichia coli O127:H6 (strain E2348/69 / EPEC)ECO2702550  UniProtKB/Swiss-Prot DNLJ_ECO27  DNA ligase
[B] Escherichia coli O139:H28 (strain E24377A / ETEC)ECO2402544  UniProtKB/Swiss-Prot DNLJ_ECO24  DNA ligase, NAD-dependent
[B] Escherichia coli O157:H7ECO5703075   NP_288973.1  Residues 1 to 671 of 671 are 99.25 pct identical to residues 1 to 671 of 671 from Escherichia coli K-12 Strain MG1655: B2411 DNA ligase
[B] Escherichia coli O157:H7 (strain EC4115 / EHEC)ECO5E03084  UniProtKB/Swiss-Prot DNLJ_ECO5E  DNA ligase, NAD-dependent
[B] Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)ECOLU02665  UniProtKB/Swiss-Prot DNLJ_ECOLU  DNA ligase
[B] Escherichia coli O1:K1 / APECECOK102317  UniProtKB/Swiss-Prot DNLJ_ECOK1  NAD-dependent DNA ligase LigA
[B] Escherichia coli O45:K1 (strain S88 / ExPEC)ECO4502474  UniProtKB/Swiss-Prot DNLJ_ECO45  DNA ligase
[B] Escherichia coli O6ECOL602838  UniProtKB/Swiss-Prot DNLJ_ECOL6  DNA ligase
[B] Escherichia coli O6:K15:H31 (strain 536)ECOL502397  UniProtKB/Swiss-Prot DNLJ_ECOL5  DNA ligase
[B] Escherichia coli O7:K1 (strain IAI39 / ExPEC)ECO7I02417  UniProtKB/Swiss-Prot DNLJ_ECO7I  DNA ligase
[B] Escherichia coli O81 (strain ED1a)ECO8102703  UniProtKB/Swiss-Prot DNLJ_ECO81  DNA ligase
[B] Escherichia coli O9:H4 (strain HS)ECOHS02364  UniProtKB/Swiss-Prot DNLJ_ECOHS  DNA ligase, NAD-dependent
[B] Klebsiella pneumoniae (strain 342)KLEP301354  UniProtKB/Swiss-Prot DNLJ_KLEP3  DNA ligase, NAD-dependent
[B] Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)KLEP702692  UniProtKB/Swiss-Prot DNLJ_KLEP7  DNA ligase
[B] Erwinia carotovora (subsp. atroseptica)ERWCT03548  UniProtKB/Swiss-Prot DNLJ_ERWCT  Similar to Escherichia coli DNA ligase LigA or Lig or DnaL or PdeC or Lop or b2411 SWALL:DNLJ_ECOLI (SWALL:P15042) (671 aa) fasta scores: E(): 6.6e-198, 76.7% id in 674 aa DNA ligase
[B] Photorhabdus luminescens (subsp. laumondii)PHOLL01351  UniProtKB/Swiss-Prot DNLJ_PHOLL  DNA ligase (polydeoxyribonucleotide synthase [NAD+])
[B] Proteus mirabilis (strain HI4320)PROMH01803  UniProtKB/Swiss-Prot DNLJ_PROMH  DNA ligase
[B] Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)SALAR00441  UniProtKB/Swiss-Prot DNLJ_SALAR  Putative uncharacterized protein
[B] Salmonella agona (strain SL483)SALA402389  UniProtKB/Swiss-Prot DNLJ_SALA4  DNA ligase, NAD-dependent
[B] Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67SALCH02398  UniProtKB/Swiss-Prot DNLJ_SALCH  IPR000445: Helix-hairpin-helix motif; IPR001357: BRCT; IPR001679: NAD-dependent DNA ligase DNA ligase
[B] Salmonella dublin (strain CT_02021853)SALDC02533  UniProtKB/Swiss-Prot DNLJ_SALDC  DNA ligase, NAD-dependent
[B] Salmonella enteritidis PT4 (strain P125109)SALEP02391  UniProtKB/Swiss-Prot DNLJ_SALEP  DNA ligase
[B] Salmonella gallinarum (strain 287/91 / NCTC 13346)SALG202361  UniProtKB/Swiss-Prot DNLJ_SALG2  DNA ligase
[B] Salmonella heidelberg (strain SL476)SALHS02504  UniProtKB/Swiss-Prot DNLJ_SALHS  DNA ligase, NAD-dependent
[B] Salmonella newport (strain SL254)SALNS02449  UniProtKB/Swiss-Prot DNLJ_SALNS  DNA ligase
[B] Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)SALPB00516  UniProtKB/Swiss-Prot DNLJ_SALPB  Putative uncharacterized protein
[B] Salmonella paratyphi A (strain AKU_12601)SALPK00426  UniProtKB/Swiss-Prot DNLJ_SALPK  DNA ligase
[B] Salmonella paratyphi-aSALPA00408  UniProtKB/Swiss-Prot DNLJ_SALPA  similar to Salmonella typhi Ty2 DNA ligase DNA ligase
[B] Salmonella schwarzengrund (strain CVM19633)SALSV02472  UniProtKB/Swiss-Prot DNLJ_SALSV  DNA ligase, NAD-dependent
[B] Salmonella typhiSALTI02428  UniProtKB/Swiss-Prot DNLJ_SALTI  DNA ligase
[B] Salmonella typhimuriumSALTY02331  UniProtKB/Swiss-Prot DNLJ_SALTY  similar to Escherichia coli DNA ligase (AAC75464.1) DNA ligase
[B] Serratia proteamaculans (strain 568)SERP503420  UniProtKB/Swiss-Prot DNLJ_SERP5  DNA ligase, NAD-dependent
[B] Shigella boydii serotype 4 (strain Sb227)SHIBS01973  UniProtKB/Swiss-Prot DNLJ_SHIBS  Code: L; COG: COG0272 DNA ligase
[B] Shigella dysenteriae serotype 1 (strain Sd197)SHIDS02008  UniProtKB/Swiss-Prot DNLJ_SHIDS  Code: L; COG: COG0272 DNA ligase
[B] Shigella flexneriSHIFL02199  UniProtKB/Swiss-Prot DNLJ_SHIFL  Residues 1 to 671 of 671 are 99 pct identical to residues 1 to 671 of a 671 aa protein from Escherichia coli K12 ref: NP_416906.1 DNA ligase
[B] Shigella flexneri serotype 5b (strain 8401)SHIF802082  UniProtKB/Swiss-Prot DNLJ_SHIF8  DNA ligase Code: L; COG: COG0272
[B] Shigella sonnei (strain Ss046)SHISS02061  UniProtKB/Swiss-Prot DNLJ_SHISS  Code: L; COG: COG0272 DNA ligase
[B] Sodalis glossinidius (strain morsitans)SODGM01645  UniProtKB/Swiss-Prot DNLJ_SODGM  DNA ligase
[B] Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)YERE801147  UniProtKB/Swiss-Prot DNLJ_YERE8  DNA ligase
[B] Yersinia pestisYERPE02751  UniProtKB/Swiss-Prot DNLJ_YERPE  DNA ligase
[B] Yersinia pestis (biovar Antiqua strain Antiqua)YERPA02057  UniProtKB/Swiss-Prot DNLJ_YERPA  DNA ligase
[B] Yersinia pestis (biovar Antiqua strain Nepal516)YERPN01333  UniProtKB/Swiss-Prot DNLJ_YERPN  DNA ligase
[B] Yersinia pestis (strain Pestoides F)YERPP01980  UniProtKB/Swiss-Prot DNLJ_YERPP  DNA ligase
[B] Yersinia pestis bv. Antiqua (strain Angola)YERPG02354  UniProtKB/Swiss-Prot DNLJ_YERPG  DNA ligase, NAD-dependent
[B] Yersinia pseudotuberculosisYERPS02690  UniProtKB/Swiss-Prot DNLJ_YERPS  DNA ligase
[B] Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758)YERP301286  UniProtKB/Swiss-Prot DNLJ_YERP3  DNA ligase, NAD-dependent
[B] Yersinia pseudotuberculosis serotype IB (strain PB1/+)YERPB02748  UniProtKB/Swiss-Prot DNLJ_YERPB  DNA ligase, NAD-dependent
[B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII)YERPY01403  UniProtKB/Swiss-Prot DNLJ_YERPY  DNA ligase, NAD-dependent
[B] Coxiella burnetiiCOXBU00514   NP_819574.1  identified by match to PFAM protein family HMM PF03119 DNA ligase, NAD-dependent
[B] Coxiella burnetii (strain CbuG_Q212)COXB201258  UniProtKB/Swiss-Prot DNLJ_COXB2  DNA ligase
[B] Coxiella burnetii (strain Dugway 5J108-111)COXBN01416  UniProtKB/Swiss-Prot DNLJ_COXBN  DNA ligase, NAD-dependent
[B] Coxiella burnetii (strain RSA 331 / Henzerling II)COXBR00556  UniProtKB/Swiss-Prot DNLJ_COXBR  DNA ligase, NAD-dependent
[B] Legionella pneumophila (strain Corby)LEGPC02250  UniProtKB/Swiss-Prot DNLJ_LEGPC  DNA ligase
[B] Legionella pneumophila (strain Lens)LEGPL00985  UniProtKB/Swiss-Prot DNLJ_LEGPL  DNA ligase
[B] Legionella pneumophila (strain Paris)LEGPA01016  UniProtKB/Swiss-Prot DNLJ_LEGPA  DNA ligase
[B] Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152)LEGPH00920  UniProtKB/TrEMBL Q5ZWX6  conserved gene DNA ligase
[B] Methylococcus capsulatusMETCA02288  UniProtKB/Swiss-Prot DNLJ_METCA  identified by similarity to SP:P15042; match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573)ALCBS00947  UniProtKB/Swiss-Prot DNLJ_ALCBS  DNA ligase
[B] Hahella chejuensis (strain KCTC 2396)HAHCH04457  UniProtKB/Swiss-Prot DNLJ_HAHCH  DNA ligase, NAD-dependent TIGRFAMsMatches:TIGR00575
[B] Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)CHRSD00699  UniProtKB/Swiss-Prot DNLJ_CHRSD  DNA ligase, NAD-dependent
[B] Marinomonas sp. (strain MWYL1)MARMS03341  UniProtKB/Swiss-Prot DNLJ_MARMS  DNA ligase, NAD-dependent
[B] Actinobacillus pleuropneumoniae serotype 3 (strain JL03)ACTPJ01261  UniProtKB/Swiss-Prot DNLJ_ACTPJ  DNA ligase
[B] Actinobacillus pleuropneumoniae serotype 5b (strain L20)ACTP201275  UniProtKB/Swiss-Prot DNLJ_ACTP2  DNA ligase
[B] Actinobacillus pleuropneumoniae serotype 7 (strain AP76)ACTP701328  UniProtKB/Swiss-Prot DNLJ_ACTP7  DNA ligase
[B] Actinobacillus succinogenes (strain ATCC 55618 / 130Z)ACTSZ02029  UniProtKB/Swiss-Prot DNLJ_ACTSZ  DNA ligase, NAD-dependent
[B] Haemophilus ducreyiHAEDU00700  UniProtKB/Swiss-Prot DNLJ_HAEDU  polydeoxyribonucleotide synthase (NAD+) DNA ligase
[B] Haemophilus influenzaeHAEIN01082  UniProtKB/Swiss-Prot DNLJ_HAEIN  DNA ligase
[B] Haemophilus influenzae (strain 86-028NP)HAEI801102   AAX88107.1  polydeoxyribonucleotide synthase; Similar to: HI1100, DNLJ_HAEIN DNA ligase
[B] Haemophilus influenzae (strain PittEE)HAEIE01147  UniProtKB/Swiss-Prot DNLJ_HAEIE  DNA ligase
[B] Haemophilus influenzae (strain PittGG)HAEIG01501  UniProtKB/Swiss-Prot DNLJ_HAEIG  NAD-dependent DNA ligase LigA
[B] Haemophilus parasuis serovar 5 (strain SH0165)HAEPS00010  UniProtKB/Swiss-Prot DNLJ_HAEPS  DNA ligase
[B] Haemophilus somnus (strain 129PT)HAES100381  UniProtKB/Swiss-Prot DNLJ_HAES1  DNA ligase
[B] Haemophilus somnus (strain 2336)HAES200682  UniProtKB/Swiss-Prot DNLJ_HAES2  DNA ligase, NAD-dependent
[B] Mannheimia succiniciproducens (strain MBEL55E)MANSM01760  UniProtKB/Swiss-Prot DNLJ_MANSM  NAD-dependent DNA ligase (contains BRCT domain type II) Lig protein
[B] Pasteurella multocidaPASMU01716  UniProtKB/Swiss-Prot DNLJ_PASMU  DNA ligase
[B] Acinetobacter baumannii (strain AB0057)ACIB500819  UniProtKB/Swiss-Prot DNLJ_ACIB5  DNA ligase
[B] Acinetobacter baumannii (strain AB307-0294)ACIB302757  UniProtKB/Swiss-Prot DNLJ_ACIB3  DNA ligase
[B] Acinetobacter baumannii (strain ACICU)ACIBC00755  UniProtKB/Swiss-Prot DNLJ_ACIBC  NAD-dependent DNA ligase
[B] Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755)ACIBT00739   ABO11237.1  DNA ligase
[B] Acinetobacter baumannii (strain AYE)ACIBY02789   CAM87830.1  DNA ligase
[B] Acinetobacter baumannii (strain SDF)ACIBS02314   CAP01965.1  DNA ligase
[B] Psychrobacter arcticus (strain DSM 17307 / 273-4)PSYA200317  UniProtKB/Swiss-Prot DNLJ_PSYA2  DNA ligase
[B] Psychrobacter cryohalolentis (strain K5)PSYCK00351  UniProtKB/Swiss-Prot DNLJ_PSYCK  DNA ligase, NAD-dependent
[B] Psychrobacter sp. (strain PRwf-1)PSYWF00464  UniProtKB/Swiss-Prot DNLJ_PSYWF  DNA ligase, NAD-dependent
[B] Cellvibrio japonicus (strain Ueda107)CELJU01835  UniProtKB/Swiss-Prot DNLJ_CELJU  DNA ligase, NAD-dependent
[B] Pseudomonas aeruginosa (strain PA7)PSEA703728  UniProtKB/Swiss-Prot DNLJ_PSEA7  DNA ligase, NAD-dependent
[B] Pseudomonas entomophila (strain L48)PSEE401611  UniProtKB/Swiss-Prot DNLJ_PSEE4  NAD-dependent DNA ligase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3018436; Product type e : enzyme
[B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF501860  UniProtKB/Swiss-Prot DNLJ_PSEF5  identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03120; match to protein family HMM TIGR00575 DNA ligase, NAD-dependent
[B] Pseudomonas putida (strain F1 / ATCC 700007)PSEP101569  UniProtKB/Swiss-Prot DNLJ_PSEP1  DNA ligase, NAD-dependent
[B] Pseudomonas putida (strain GB-1)PSEPG03801  UniProtKB/Swiss-Prot DNLJ_PSEPG  DNA ligase, NAD-dependent unknown EC_number=6.5.1.2 KEGG: pen:PSEEN1769 NAD-dependent DNA ligase TIGRFAM: DNA ligase, NAD-dependent PFAM: BRCT domain protein; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
[B] Pseudomonas putida (strain KT2440)PSEPK04191  UniProtKB/Swiss-Prot DNLJ_PSEPK  similar to GB:X12597, GB:L13805, SP:P09429, PID:1435197, PID:32327, and PID:968888; identified by sequence similarity; putative DNA ligase, NAD-dependent
[B] Pseudomonas putida (strain W619)PSEPW03574  UniProtKB/Swiss-Prot DNLJ_PSEPW  DNA ligase, NAD-dependent
[B] Pseudomonas stutzeri (strain A1501)PSEU501798   ABP79531.1  DNA ligase, NAD-dependent
[B] Francisella philomiragia subsp. philomiragia (strain ATCC 25017)FRAP201311  UniProtKB/Swiss-Prot DNLJ_FRAP2  DNA ligase
[B] Francisella tularensis (subsp. tularensis)FRATT01340  UniProtKB/Swiss-Prot DNLJ_FRATT  Similar to P43813 DNA ligase from Haemophilus influenzae (679 aa). FASTA: opt: 2154 Z-score: 2353.2 E(): 3.2e-123 Smith-Waterman score: 2154; 48.817 identity in 676 aa overlap DNA ligase
[B] Francisella tularensis subsp. holarctica (strain FTA)FRATF00542  UniProtKB/Swiss-Prot DNLJ_FRATF  DNA ligase
[B] Francisella tularensis subsp. holarctica (strain LVS)FRATH00627  UniProtKB/Swiss-Prot DNLJ_FRATH  DNA ligase
[B] Francisella tularensis subsp. holarctica (strain OSU18)FRATO00538  UniProtKB/Swiss-Prot DNLJ_FRATO  DNA ligase
[B] Francisella tularensis subsp. mediasiatica (strain FSC147)FRATM00504  UniProtKB/Swiss-Prot DNLJ_FRATM  DNA ligase, NAD-dependent
[B] Francisella tularensis subsp. novicida (strain U112)FRATN01314  UniProtKB/Swiss-Prot DNLJ_FRATN  DNA ligase
[B] Francisella tularensis subsp. tularensis (strain WY96-3418)FRATW00373  UniProtKB/Swiss-Prot DNLJ_FRATW  DNA ligase, NAD-dependent
[B] Mycobacteriophage FRAT1FRAT101321  UniProtKB/Swiss-Prot DNLJ_FRAT1  DNA ligase Similar to P43813 DNA ligase from Haemophilus influenzae (679 aa). FASTA: opt: 2154 Z-score: 2353.2 E(): 3.2e-123 Smith-Waterman score: 2154; 48.817 identity in 676 aa overlap
[B] Thiomicrospira crunogena (strain XCL-2)THICR01236  UniProtKB/Swiss-Prot DNLJ_THICR  DNA ligase, NAD-dependent
[B] Aliivibrio salmonicida (strain LFI1238)ALISL02083  UniProtKB/Swiss-Prot DNLJ_ALISL  NAD-dependent DNA ligase
[B] Vibrio fischeri (strain MJ11)VIBFM01946  UniProtKB/Swiss-Prot DNLJ_VIBFM  DNA ligase, NAD-dependent
[B] Photobacterium profundumPHOPR00804  UniProtKB/Swiss-Prot DNLJ_PHOPR  putative NAD-dependent DNA ligase
[B] Vibrio choleraeVIBCH00957  UniProtKB/Swiss-Prot DNLJ_VIBCH  similar to GB:M24278 SP:P15042 GB:M30255 PID:146613 PID:146615; identified by sequence similarity; putative DNA ligase
[B] Vibrio cholerae (strain ATCC 39541 / O395)VIBC300467  UniProtKB/Swiss-Prot DNLJ_VIBC3  DNA ligase
[B] Vibrio cholerae serotype O1 (strain M66-2)VIBCM00905  UniProtKB/Swiss-Prot DNLJ_VIBCM  
[B] Vibrio fischeri (strain ATCC 700601 / ES114)VIBF101886  UniProtKB/Swiss-Prot DNLJ_VIBF1  NAD-dependent DNA ligase
[B] Vibrio harveyi (strain ATCC BAA-1116 / BB120)VIBHB01135  UniProtKB/Swiss-Prot DNLJ_VIBHB  Putative uncharacterized protein
[B] Vibrio parahaemolyticusVIBPA00799  UniProtKB/Swiss-Prot DNLJ_VIBPA  similar to GB:AAF94133.1 (AE004178) percent identity 74 in 665 aa DNA ligase
[B] Vibrio splendidus (strain LGP32)VIBSL02160  UniProtKB/Swiss-Prot DNLJ_VIBSL  DNA ligase
[B] Vibrio vulnificusVIBVU00195  UniProtKB/Swiss-Prot DNLJ_VIBVU  contains BRCT domain type II; COG0272 NAD-dependent DNA ligase
[B] Vibrio vulnificus (strain YJ016)VIBVY00978  UniProtKB/Swiss-Prot DNLJ_VIBVY  DNA ligase
[B] Xanthomonas axonopodis (pv. citri)XANAC01587  UniProtKB/Swiss-Prot DNLJ_XANAC  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark DNA ligase
[B] Xanthomonas campestris pv. campestrisXANCP01531  UniProtKB/Swiss-Prot DNLJ_XANCP  DNA ligase
[B] Xanthomonas campestris pv. campestris (strain 8004)XANC802575  UniProtKB/Swiss-Prot DNLJ_XANC8  DNA ligase
[B] Xanthomonas campestris pv. campestris (strain B100)XANCB02681  UniProtKB/Swiss-Prot DNLJ_XANCB  DNA ligase
[B] Xanthomonas campestris pv. vesicatoria (strain 85-10)XANC501633  UniProtKB/Swiss-Prot DNLJ_XANC5  DNA ligase
[B] Xanthomonas oryzae pv. oryzae (strain MAFF 311018)XANOM02103  UniProtKB/Swiss-Prot DNLJ_XANOM  DNA ligase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker
[B] Magnetococcus sp. (strain MC-1)MAGSM03518  UniProtKB/Swiss-Prot DNLJ_MAGSM  transcriptional regulator, Fis family KEGG: rme:Rmet_1428 DNA ligase, NAD-dependent TIGRFAM: DNA ligase, NAD-dependent PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
[B] Phytoplasma mali (strain AT)PHYMT00241  UniProtKB/Swiss-Prot DNLJ_PHYMT  NAD-dependent DNA ligase
[B] Phytoplasma australiensePHYAS00711  UniProtKB/Swiss-Prot DNLJ_PHYAS  NAD-dependent DNA ligase
[B] Aster yellows witches'-broom phytoplasma (strain AYWB)AYWBP00314  UniProtKB/Swiss-Prot DNLJ_AYWBP  NAD-dependent DNA ligase
[B] Onion yellows phytoplasmaONYPE00403  UniProtKB/Swiss-Prot DNLJ_ONYPE  PAM438 identified by sequence similarity; putative NAD-dependent DNA ligase
[B] Mesoplasma florumMESFL00160  UniProtKB/Swiss-Prot DNLJ_MESFL  DNA ligase, polydeoxyribonucleotide synthase NAD+
[B] Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154)MYCCT00671  UniProtKB/Swiss-Prot DNLJ_MYCCT  DNA ligase, NAD-dependent identified by similarity to SP:P49421; match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
[B] Mycoplasma hyopneumoniae (strain 7448)MYCH700260  UniProtKB/Swiss-Prot DNLJ_MYCH7  identified by sequence similarity; putative; ORF located using Blastx; COG0272 DNA ligase
[B] Mycoplasma mycoides subsp. mycoides SCMYCMS00720  UniProtKB/Swiss-Prot DNLJ_MYCMS  DNA ligase
[B] Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)FERNB00171  UniProtKB/Swiss-Prot DNLJ_FERNB  DNA ligase, NAD-dependent
[B] Petrotoga mobilis (strain DSM 10674 / SJ95)PETMO00967  UniProtKB/Swiss-Prot DNLJ_PETMO  DNA ligase, NAD-dependent
[B] Thermosipho africanus (strain TCF52B)THEAB01697  UniProtKB/Swiss-Prot DNLJ_THEAB  DNA ligase
[B] Thermosipho melanesiensis (strain BI429 / DSM 12029)THEM401472  UniProtKB/Swiss-Prot DNLJ_THEM4  DNA ligase, NAD-dependent
[B] Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)THELT00702  UniProtKB/Swiss-Prot DNLJ_THELT  DNA ligase, NAD-dependent
[B] Thermotoga maritimaTHEMA00100  UniProtKB/Swiss-Prot DNLJ_THEMA  DNA ligase
[B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP100813  UniProtKB/Swiss-Prot DNLJ_THEP1  DNA ligase, NAD-dependent
[B] Thermotoga sp. (strain RQ2)THESQ00837  UniProtKB/Swiss-Prot DNLJ_THESQ  DNA ligase, NAD-dependent
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP00004  UniProtKB/Swiss-Prot DNLJ1_OPITP  DNA ligase, NAD-dependent
[B] Methylokorus infernorum (strain V4)METI401695  UniProtKB/Swiss-Prot DNLJ_METI4  NAD-dependent DNA ligase
[B] Elusimicrobium minutum (strain Pei191)ELUMP01209  UniProtKB/Swiss-Prot DNLJ_ELUMP  DNA ligase, NAD-dependent
[B] Uncultured termite group 1 bacterium phylotype Rs-D17UNCTG00417  UniProtKB/Swiss-Prot DNLJ_UNCTG  DNA ligase