List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 185051

arabinan endo-1,5-alpha-L-arabinosidase A precursor
This group has 5 members: 1 [E]ukaryota 4 [B]acteria
Fingerprint: YIVYHRR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Aspergillus fumigatusASPFU02084  UniProtKB/TrEMBL Q4WHR4  go_function: hydrolase activity, hydrolyzing N-glycosyl compounds [goid 0016799]; go_process: metabolism [goid 0008152] xylosidase/arabinosidase, putative
[B] Bacteroides fragilisBACFR01249  UniProtKB/TrEMBL Q64WX7  similar to gp:AE016941_3 [Bacteroides thetaiotaomicron VPI-5482], percent identity 63 in 330 aa, BLASTP E(): e-130 arabinan endo-1,5-alpha-L-arabinosidase A precursor
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN01138  UniProtKB/TrEMBL Q5LG21  Similar to Bacteroides ovatus xylosidase/arabinosidase xsa SWALL:XYLB_BACOV (SWALL:P49943) (325 aa) fasta scores: E(): 8.9e-09, 29.3% id in 331 aa, and to Bacteroides thetaiotaomicron arabinan endo-1,5-alpha-L-arabinosidase A precursor BT3516 SWALL:AAO78622 (EMBL:AE016941) (637 aa) fasta scores: E(): 7.5e-93, 63.63% id in 330 aa, and to Bacteroides thetaiotaomicron endo-1,4-beta-xylanase D precursor BT3675 SWALL:AAO78780 (EMBL:AE016941) (333 aa) fasta scores: E(): 2.2e-29, 38.37% id in 344 aa putative xylosidase/arabinosidase
[B] Bacteroides thetaiotaomicronBACTN03635  UniProtKB/TrEMBL Q8A1I6  Endo-1,4-beta-xylanase D
[B] Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)PARD801292  UniProtKB/TrEMBL A6LBN4  Glycoside hydrolase family 43, candidate beta- glycosidase