List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 278229

endo-beta-N-acetylglucosaminidase
This group has 11 members: 11 [B]acteria
Fingerprint: YFINQET

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288)STRGC00206  UniProtKB/TrEMBL A8AUR8  LPXTG cell wall surface protein, glycosyl hydrolase family
[B] Streptococcus pneumoniaeSTRPN00460  UniProtKB/TrEMBL Q97S90  identified by match to PFAM protein family HMM PF00746 endo-beta-N-acetylglucosaminidase, putative
[B] Streptococcus pneumoniae (strain ATCC BAA-255 / R6)STRR600439  UniProtKB/TrEMBL Q8CZ52  Similar to endo-beta-N-acetylglucosaminidase Hypothetical protein
[B] Streptococcus pneumoniae (strain CGSP14)STRPS00462  UniProtKB/TrEMBL B2IMA1  Endo-beta-N-acetylglucosaminidase, putative
[B] Streptococcus pneumoniae (strain Hungary19A-6)STRPI00561  UniProtKB/TrEMBL B1IA35  Endo-beta-N-acetylglucosaminidase D
[B] Streptococcus pneumoniae (strain JJA)STRZJ00437  UniProtKB/TrEMBL C1CCP2  Endo-beta-N-acetylglucosaminidase D
[B] Streptococcus pneumoniae (strain P1031)STRZP00480  UniProtKB/TrEMBL C1CIZ0  Endo-beta-N-acetylglucosaminidase D
[B] Streptococcus pneumoniae serotype 19F (strain G54)STRP400442  UniProtKB/TrEMBL B5E1U7  Endo-beta-N-acetylglucosaminidase, point mutation
[B] Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)STRP200416  UniProtKB/TrEMBL Q04LZ6  endo-beta-N-acetylglucosaminidase, putative equivalent gene in S.pneumoniae TIGR4 = SP0498; equivalent gene in S.pneumoniae R6 = spr0440; identified by match to protein family HMM PF00746; match to protein family HMM PF00754; match to protein family HMM PF03644; match to protein family HMM PF07501; match to protein family HMM PF07523; match to protein family HMM PF07554; match to protein family HMM TIGR01167
[B] Streptococcus suis (strain 05ZYH33)STRSY01906  UniProtKB/TrEMBL A4VXP9  Endo-beta-N-acetylglucosaminidase, putative
[B] Streptococcus suis (strain 98HAH33)STRS201913  UniProtKB/TrEMBL A4W3Z5  Endo-beta-N-acetylglucosaminidase, putative