List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 28952

multidrug/solvent RND transporter TtgB
This group has 23 members: 23 [B]acteria
Fingerprint: NQYPSIA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK03436  UniProtKB/TrEMBL B9JDA5  Multidrug efflux transporter protein
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD02962  UniProtKB/TrEMBL A9IT11  AcrB/AcrD/AcrF family protein
[B] Ralstonia eutropha (strain JMP134)RALEJ04053  UniProtKB/TrEMBL Q46TT9  Hydrophobe/amphiphile efflux-1 HAE1
[B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME03840  UniProtKB/TrEMBL Q1LGD4  Hydrophobe/amphiphile efflux-1 HAE1
[B] Acidovorax sp. (strain JS42)ACISJ00321  UniProtKB/TrEMBL A1W2V6  transporter, hydrophobe/amphiphile efflux-1 (HAE1) family TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family PFAM: acriflavin resistance protein KEGG: pau:PA14_05540 RND multidrug efflux transporter MexB
[B] Methylibium petroleiphilum (strain PM1)METPP02916  UniProtKB/TrEMBL A2SK30  Acriflavine resistance protein B
[B] Pseudomonas aeruginosaPSEAE00426  UniProtKB/Swiss-Prot MEXB_PSEAE  Multidrug resistance protein mexB
[B] Pseudomonas aeruginosa (strain LESB58)PSEA800423  UniProtKB/TrEMBL B7V413  Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexB
[B] Pseudomonas aeruginosa (strain PA7)PSEA700525  UniProtKB/TrEMBL A6UYN6  RND multidrug efflux transporter MexB
[B] Pseudomonas aeruginosa (strain UCBPP-PA14)PSEAB00443  UniProtKB/TrEMBL Q02TY6  RND multidrug efflux transporter MexB
[B] Pseudomonas entomophila (strain L48)PSEE404041  UniProtKB/TrEMBL Q1I5N9  multidrug/solvent RND transporter TtgB Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9642183; Product type t : transporter
[B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF501308  UniProtKB/TrEMBL Q4KH23  identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915 multidrug/solvent RND transporter TtgB
[B] Pseudomonas fluorescens (strain PfO-1)PSEPF01274  UniProtKB/TrEMBL Q3KGT4  Hydrophobe/amphiphile efflux-1 HAE1
[B] Pseudomonas mendocina (strain ymp)PSEMY03659  UniProtKB/TrEMBL A4XYP8  Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family precursor
[B] Pseudomonas putida (strain F1 / ATCC 700007)PSEP104277  UniProtKB/TrEMBL A5W8K1  Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
[B] Pseudomonas putida (strain GB-1)PSEPG04389  UniProtKB/TrEMBL B0KV81  transporter, hydrophobe/amphiphile efflux-1 (HAE1) family TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family PFAM: acriflavin resistance protein KEGG: pen:PSEEN4361 multidrug/solvent RND transporter TtgB
[B] Pseudomonas putida (strain KT2440)PSEPK01367  UniProtKB/Swiss-Prot TTGB_PSEPK  similar to GP:3319233, and GP:3319233; identified by sequence similarity; putative multidrug/solvent RND transporter TtgB
[B] Pseudomonas putida (strain W619)PSEPW01023  UniProtKB/TrEMBL B1J3T8  Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
[B] Pseudomonas stutzeri (strain A1501)PSEU503819  UniProtKB/TrEMBL A4VRG1  Multidrug/solvent RND transporter TtgB
[B] Pseudomonas syringae (pv. tomato)PSESM04069  UniProtKB/TrEMBL Q87X84  AcrB/AcrD/AcrF family protein
[B] Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)PSE1403749  UniProtKB/TrEMBL Q48EP3  identified by similarity to GB:AAN67008.1; match to protein family HMM PF00873; match to protein family HMM TIGR00915 multidrug/solvent tranporter
[B] Pseudomonas syringae pv. syringae (strain B728a)PSEU203989  UniProtKB/TrEMBL Q4ZP84  Hydrophobe/amphiphile efflux-1 HAE1
[B] Stenotrophomonas maltophilia (strain K279a)STRMK03815  UniProtKB/TrEMBL B2FUV2  Putative acriflavin resistance protein B