List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 327036

4-alpha-glucanotransferase
This group has 19 members: 5 [A]rchaea 14 [B]acteria
Fingerprint: LRYLIPF

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Pyrococcus abyssiPYRAB00176  UniProtKB/Swiss-Prot AMYA_PYRAB  Alpha-amylase
[A] Pyrococcus furiosusPYRFU00270  UniProtKB/Swiss-Prot AMYA_PYRFU  Alpha-amylase
[A] Pyrococcus horikoshiiPYRHO00200  UniProtKB/Swiss-Prot AMYA_PYRHO  Alpha-amylase
[A] Thermococcus kodakaraensisPYRKO01803  UniProtKB/Swiss-Prot MALQ_PYRKO  4-alpha-Glucanotransferase, GH57 family
[A] Thermococcus onnurineus (strain NA1)THEON01723  UniProtKB/TrEMBL B6YUX8  4-alpha-Glucanotransferase
[B] Sulfurihydrogenibium sp. (strain YO3AOP1)SULSY00958  UniProtKB/TrEMBL B2V9J4  4-alpha-glucanotransferase
[B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78)CHLT300900  UniProtKB/TrEMBL B3QX98  4-alpha-glucanotransferase
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT600725  UniProtKB/Swiss-Prot AMY1_DICT6  Alpha-amylase 1
[B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD00836  UniProtKB/TrEMBL B8E149  4-alpha-glucanotransferase
[B] Rhodopirellula balticaRHOBA01103  UniProtKB/TrEMBL Q7UWA6  PMID: 2453362 best DB hits: BLAST: swissprot:P09961; AMY1_DICTH ALPHA-AMYLASE 1 (1,4-ALPHA-D-GLUCAN; E=1e-120 ddbj:BAA22063.1; (D88253) 4-alpha-glucanotransferase; E=1e-114 ddbj:BAA22062.1; (D87907) 4-alpha-glucanotransferase [Pyrococcus; E=1e-112 COG: PAB0118; COG1449 Alpha-amylase/alpha-mannosidase; E=1e-111 Rv3031; COG1543 Uncharacterized ACR; E=1e-04 alpha-amylase
[B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875)METFK01223  UniProtKB/TrEMBL Q1H1J9  4-alpha-glucanotransferase
[B] Nitrosomonas europaeaNITEU01965  UniProtKB/TrEMBL Q82T86  Glycosyl hydrolase family 57
[B] Nitrosomonas eutropha (strain C71)NITEC01222  UniProtKB/TrEMBL Q0AGI7  4-alpha-glucanotransferase PFAM: glycoside hydrolase, family 57 KEGG: neu:NE2032 glycosyl hydrolase family 57
[B] Dechloromonas aromatica (strain RCB)DECAR00578  UniProtKB/TrEMBL Q47IJ1  Glycoside hydrolase, family 57
[B] Nitratiruptor sp. (strain SB155-2)NITSB00940  UniProtKB/TrEMBL A6Q3J2  4-alpha-glucanotransferase
[B] Sulfurovum sp. (strain NBC37-1)SULNB01270  UniProtKB/TrEMBL A6Q9R7  4-alpha-glucanotransferase
[B] Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)ACIF202669  UniProtKB/TrEMBL B7J933  Glycosyl hydrolase, family 57
[B] Acidithiobacillus ferrooxidans (strain ATCC 53993)ACIF502320  UniProtKB/TrEMBL B5EPB5  4-alpha-glucanotransferase
[B] Methylokorus infernorum (strain V4)METI401935  UniProtKB/TrEMBL B3DYE7  Alpha-amylase/alpha-mannosidase