List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 274360

This group has 3 members: 2 [E]ukaryota 1 [B]acteria
Fingerprint: WIMLTRS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Populus trichocarpaPOPTR42818  UniProtKB/TrEMBL B9N294  jgi|Poptr1_1|827702|estExt_fgenesh4_pg.C_1200050 [DNA did not match protein] [DNA partly invalid]
[E] Arabidopsis thalianaARATH00256  UniProtKB/TrEMBL Q9LR71  glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein, contains Pfam profile PF02485: Core-2/I-Branching enzyme; go_component: membrane [goid GO:0008375@[ISS]; GO:0016020@[IEA,ISS]; GO:0016051@[ISS]; GO:0016757@[ISS]] [evidence IEA]; go_component: membrane [goid GO:0008375@[ISS]; GO:0016020@[IEA,ISS]; GO:0016051@[ISS]; GO:0016757@[ISS]] [evidence ISS]; go_function: acetylglucosaminyltransferase activity [goid GO:0008375] [evidence ISS]; go_function: transferase activity, transferring glycosyl groups [goid GO:0016757] [evidence ISS]; go_process: carbohydrate biosynthesis [goid GO:0016051] [evidence ISS] acetylglucosaminyltransferase/ transferase, transferring glycosyl groups
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB00942  UniProtKB/TrEMBL A5EAR3  Hypothetical protein