List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
groups that are linked by at least one pair
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Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
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OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
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OMA

Keyword Protein Sequence Group Entry

OMA Group 261419

Endo-1,3-1,4-beta-glycanase protein
This group has 8 members: 8 [B]acteria
Fingerprint: WIAHTPW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bradyrhizobium japonicumBRAJA01362  UniProtKB/TrEMBL Q89UP7  Blr1364 protein
[B] Mesorhizobium sp. (strain BNC1)MESSB02555  UniProtKB/TrEMBL Q11F63  glycoside hydrolase, family 16 PFAM: glycoside hydrolase, family 16 KEGG: ret:RHE_CH03380 endo-1,3-1,4-beta-glycanase protein
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK04230  UniProtKB/TrEMBL B9JNF1  Endo-1,3-1,4-beta-glycanase protein
[B] Rhizobium etli (strain CFN 42 / ATCC 51251)RHIEC03307  UniProtKB/TrEMBL Q2K4U3  endo-1,3-1,4-beta-glycanase protein similar to C-terminal of exsH (SMb20932) [Sinorhizobium meliloti] Similar to entrez-protein:O33680 Putative location:bacterial cytoplasm Psort-Score: 0.3960; go_component: extrachromosomal DNA [goid 0046821]; go_function: hydrolase activity, acting on glycosyl bonds [goid 0016798]; go_function: hydrolase activity, hydrolyzing O-glycosyl compounds [goid 0004553]; go_function: hydrolase activity [goid 0016787]; go_function: calcium ion binding [goid 0005509]; go_process: carbohydrate metabolism [goid 0005975]; go_process: polysaccharide biosynthesis [goid 0000271]
[B] Rhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW03083  UniProtKB/TrEMBL B5ZNE6  Glycoside hydrolase family 16
[B] Rhizobium leguminosarum bv. viciae (strain 3841)RHIL303807  UniProtKB/TrEMBL Q1MCM5  putative glycosyl hydrolase Codons 50 to the C-terminus are similar to codons 212 to the C-terminus of Rhizobium meliloti (Sinorhizobium meliloti) ExsH orderedlocusnames=rb1055 UniProt:EXSH_RHIME (EMBL:SMU89164) (465 aa), and codons 70 to the C-terminus are similar to codons 100 to the C-terminus of Bradyrhizobium japonicum blr1364 protein. UniProt:Q89UP7_BRAJA (EMBL:BA000040) (333 aa) similarity:fasta; with=UniProt:EXSH_RHIME (EMBL:SMU89164); Rhizobium meliloti (Sinorhizobium meliloti).; exsH; OrderedLocusNames=RB1055; ORFNames=SMb20932;; Endo-1,3-1,4-beta-glycanase exsH (EC 3.2.1.-) (Succinoglycan biosynthesis protein exsH). Endo-1,3-1,4-beta-glycanase exsH (EC 3.2.1.-) (Succinoglycan biosynthesis protein exsH).; length=465; id 31.783; 258 aa overlap; query 50-284; subject 213-457 similarity:fasta; with=UniProt:Q89UP7_BRAJA (EMBL:BA000040); Bradyrhizobium japonicum.; Blr1364 protein.; length=333; id 33.051; 236 aa overlap; query 71-285; subject 98-325
[B] Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA01117  UniProtKB/TrEMBL A9HDH8  Putative endo-1,3-1,4-beta-glycanase protein
[B] Burkholderia cenocepacia (strain MC0-3)BURCC06662  UniProtKB/TrEMBL B1KCC0  Glycoside hydrolase family 16