List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 370767
in 213
This group has 2 members: 2 [B]acteria
Fingerprint: WEDANGA
| [B] Bacteroides fragilis | BACFR00354 |  Q64ZH3 | similar to gp:AL646081_79 [Ralstonia solanacearum], percent identity 36 in 213 aa, BLASTP E(): 3e-24 Hypothetical protein |
| [B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) | BACFN00296 | Q5LIF1 | C-terminus is similar to Streptomyces sioyaensis endo-1,3-beta-glucanase SWALL:Q9L816 (EMBL:AF217415) (478 aa) fasta scores: E(): 3.8e-06, 35% id in 140 aa, and the C-terminus of BF0302 is similar to the C-terminus of Ralstonia solanacearum putative transmembrane protein RSP0881 or RS01652 SWALL:Q8XRH3 (EMBL:AL646081) (767 aa) fasta scores: E(): 7.4e-16, 36.15% id in 213 aa, and the C-terminus of BF0302 is similar to the C-terminus of Bacteroides thetaiotaomicron endo-1,4-beta-xylanase D precursor BT3675 SWALL:AAO78780 (EMBL:AE016941) (333 aa) fasta scores: E(): 2.7e-15, 27.95% id in 347 aa putative exported carbohydrate-binding protein |
fasta,