List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 17552

D-amino acid dehydrogenase small subunit
This group has 18 members: 1 [E]ukaryota 17 [B]acteria
Fingerprint: WANPGAP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Populus trichocarpaPOPTR21576  UniProtKB/TrEMBL B9NI86  jgi|Poptr1_1|588004|eugene3.22680003
[B] Bordetella avium (strain 197N)BORA102350  UniProtKB/TrEMBL Q2KY51  D-amino acid dehydrogenase small subunit Also similar to BAV2005 (41.809 38d), BAV2030 (36.993 38d), BAV0960 (36.557 0d)
[B] Bordetella bronchisepticaBORBR03193  UniProtKB/TrEMBL Q7WHJ8  ortholog of Bordetella pertussis (BX470248) BP1818 D-amino acid dehydrogenase small subunit
[B] Bordetella parapertussisBORPA01885  UniProtKB/TrEMBL Q7W970  ortholog of Bordetella pertussis (BX470248) BP1818 D-amino acid dehydrogenase small subunit
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD01939  UniProtKB/TrEMBL A9IK14  D-amino acid dehydrogenase small subunit
[B] Acidovorax sp. (strain JS42)ACISJ03626  UniProtKB/TrEMBL A1WCL8  D-amino-acid dehydrogenase PFAM: FAD dependent oxidoreductase KEGG: dar:Daro_3842 FAD dependent oxidoreductase
[B] Delftia acidovorans (strain DSM 14801 / SPH-1)DELAS00527  UniProtKB/TrEMBL A9BRB6  D-amino-acid dehydrogenase
[B] Diaphorobacter sp. (strain TPSY)DIAST03085  UniProtKB/TrEMBL B9MGW4  D-amino-acid dehydrogenase
[B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP02357  UniProtKB/TrEMBL B1Y4T2  D-amino-acid dehydrogenase precursor
[B] Herminiimonas arsenicoxydansHERAR00690  UniProtKB/TrEMBL A4G347  D-amino acid dehydrogenase small subunit
[B] Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis)JANMA00666  UniProtKB/TrEMBL A6SVR0  D-amino-acid dehydrogenase, small subunit
[B] Chromobacterium violaceumCHRVO03684  UniProtKB/TrEMBL Q7NRT8  identified by sequence similarity; putative; ORF located using Blastx/COG0665 probable D-amino-acid dehydrogenase
[B] Azoarcus sp. (strain BH72)AZOSB00963  UniProtKB/TrEMBL A1K429  probable D-amino acid dehydrogenase small subunit The L-alanine catabolic pathway proceeds in two steps: racemization of the L-isomer to D-alanine by alanine racemase and oxidative deamination of D-alanine to pyruvate and ammonia by D- amino acid dehydrogenase. Similar to trembl|Q7NRT8 (52%) and to sprot|DADA_ECOLI (40%). Pfam (PF01266): D-amino acid oxidase Specificity unclear
[B] Azoarcus sp. (strain EbN1)AZOSE00604  UniProtKB/TrEMBL Q5P7F7  D-amino acid dehydrogenase small subunit
[B] Dechloromonas aromatica (strain RCB)DECAR03789  UniProtKB/Swiss-Prot DADA_DECAR  FAD dependent oxidoreductase
[B] Alkalilimnicola ehrlichei (strain MLHE-1)ALHEH00410  UniProtKB/TrEMBL Q0ABL8  FAD dependent oxidoreductase
[B] Psychrobacter arcticus (strain DSM 17307 / 273-4)PSYA200156  UniProtKB/TrEMBL Q4FVC7  Probable D-amino acid dehydrogenase subunit
[B] Psychrobacter cryohalolentis (strain K5)PSYCK00168  UniProtKB/TrEMBL Q1QEF1  D-amino-acid dehydrogenase