List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 394851

core-2/I-branching enzyme family protein
This group has 5 members: 5 [B]acteria
Fingerprint: VWIPDES

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Dinoroseobacter shibae (strain DFL 12)DINSH03543  UniProtKB/TrEMBL A8LQ73  Core-2/I-branching enzyme family protein
[B] Jannaschia sp. (strain CCS1)JANSC00221  UniProtKB/TrEMBL Q28VX4  glycosyl transferase, family 14
[B] Paracoccus denitrificans (strain Pd 1222)PARDP02214  UniProtKB/TrEMBL A1B4E0  glycosyl transferase, family 14 PFAM: glycosyl transferase, family 14 KEGG: sit:TM1040_0019 glycosyl transferase, family 14
[B] Silicibacter pomeroyiSILPO00035  UniProtKB/TrEMBL Q5LWI5  identified by match to protein family HMM PF02485 core-2/I-branching enzyme family protein
[B] Silicibacter sp. (strain TM1040)SILST00019  UniProtKB/TrEMBL Q1GKR4  glycosyl transferase, family 14 PFAM: glycosyl transferase, family 14: (7.8e-05) KEGG: sil:SPO0035 core-2/I-branching enzyme family protein, ev=0.0, 74% identity