List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 67916

Mannan endo-1,4-beta-mannosidase
This group has 9 members: 9 [B]acteria
Fingerprint: VNLPHAW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Streptomyces coelicolorSTRCO06198  UniProtKB/TrEMBL O86599  SC2H4.16, manA, probable secreted beta-mannosidase, len: 384 aa; 94.5% identical to MANA_STRLI mannan endo-1,4-beta-mannosidase precursor (363 aa). Contains PS00659 Glycosyl hydrolases family 5 signature and Pfam match to entry PF00150 cellulase, Cellulase (glycosyl hydrolase family 5), score 104.70, E-value 1.8e-27 secreted beta-mannosidase
[B] Thermobifida fusca (strain YX)THEFY00898  UniProtKB/TrEMBL Q47RH9  cellulose-binding, family II, bacterial type
[B] Bacillus clausii (strain KSM-K16)BACSK00319  UniProtKB/TrEMBL Q5WL93  mannan endo-1,4-beta-mannosidase
[B] Cellvibrio japonicus (strain Ueda107)CELJU03231  UniProtKB/TrEMBL B3PF24  Endo-1,4-beta-mannanase man5A
[B] Xanthomonas axonopodis (pv. citri)XANAC01748  UniProtKB/TrEMBL Q8PLK1  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark mannan endo-1,4-beta-mannosidase
[B] Xanthomonas campestris pv. campestrisXANCP01729  UniProtKB/TrEMBL Q8P9S0  Mannan endo-1,4-beta-mannosidase
[B] Xanthomonas campestris pv. campestris (strain 8004)XANC802376  UniProtKB/TrEMBL Q4UTW5  mannan endo-1,4-beta-mannosidase
[B] Xanthomonas campestris pv. campestris (strain B100)XANCB02479  UniProtKB/TrEMBL B0RTT2  Exported mannan endo-1,4-beta-mannosidase , cellulase
[B] Xanthomonas campestris pv. vesicatoria (strain 85-10)XANC501789  UniProtKB/TrEMBL Q3BUK6  putative endo-1,4-beta-mannosidase