| [E] Oryzias latipes | ORYLA05832 | ENSORLP00000015888 | - |
| [E] Ciona savignyi | CIOSA01349 | ENSCSAVP00000006930 | - |
| [E] Ixodes scapularis | IXOSC11228 | B7PXS9 | uroporphyrinogen decarboxylase, putative |
| [E] Magnaporthe grisea | MAGGR04014 | A4RK37 | Magnaporthe grisea hypothetical protein |
| [E] Pichia stipitis | PICST04922 | A3LW87 | uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase fifth enzyme in the heme biosynthetic pathway; go_function: uroporphyrinogen decarboxylase activity; go_process: porphyrin biosynthesis |
| [E] Schizosaccharomyces pombe | SCHPO04648 | CAB60679.1 | uroporphyrinogen decarboxylase (predicted); similar to S. cerevisiae HEM12 |
| [E] Laccaria bicolor | LACBI02041 | estExt_GeneWisePlus_worm.C_410149 | jgi|Lacbi1|191778|estExt_GeneWisePlus_worm.C_410149 |
| [E] Cryptococcus neoformans | CRYNE02100 | Q5KMY7 | go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: uroporphyrinogen decarboxylase activity [goid 0004853]; go_process: heme biosynthesis [goid 0006783] uroporphyrinogen decarboxylase, putative |
| [B] Acidobacteria bacterium (strain Ellin345) | ACIBL00692 | DCUP_ACIBL | uroporphyrinogen decarboxylase |
| [B] Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) | ACIC502306 | C1F1C6 | Uroporphyrinogen decarboxylase |
| [B] Solibacter usitatus (strain Ellin6076) | SOLUE05087 | DCUP_SOLUE | uroporphyrinogen decarboxylase KEGG: chy:CHY_0483 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Corynebacterium diphtheriae | CORDI00393 | DCUP_CORDI | Similar to Streptomyces coelicolor uroporphyrinogen decarboxylase HemE or SC1C3.19 SW:DCUP_STRCO (O69861) (355 aa) fasta scores: E(): 5.2e-72, 59.69% id in 330 aa, and to Escherichia coli uroporphyrinogen decarboxylase HemE or B3997 SW:DCUP_ECOLI (P29680) (354 aa) fasta scores: E(): 1.2e-43, 41.14% id in 333 aa uroporphyrinogen decarboxylase |
| [B] Corynebacterium efficiens | COREF00445 | NP_737068.1 | similar to AX064525-1|CAC25502.1| percent identity: 83 in 374 aa putative uroporphyrinogen decarboxylase |
| [B] Corynebacterium glutamicum | CORGL01169 | DCUP_CORGL | Uroporphyrinogen decarboxylase |
| [B] Corynebacterium glutamicum (strain R) | CORGB00512 | DCUP_CORGB | Hypothetical protein |
| [B] Corynebacterium jeikeium (strain K411) | CORJK01029 | Q4JVB8 | Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO- D) (UPD). uroporphyrinogen decarboxylase |
| [B] Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) | CORU700908 | B1VDH7 | Uroporphyrinogen decarboxylase |
| [B] Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) | MYCA902959 | B1MCU3 | Uroporphyrinogen decarboxylase |
| [B] Mycobacterium avium (strain 104) | MYCA103368 | DCUP_MYCA1 | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Mycobacterium paratuberculosis | MYCPA02769 | DCUP_MYCPA | HemE |
| [B] Mycobacterium gilvum (strain PYR-GCK) | MYCGI03821 | DCUP_MYCGI | uroporphyrinogen decarboxylase KEGG: mmc:Mmcs_2212 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Mycobacterium leprae | MYCLE01040 | DCUP_MYCLE | Identical to the previously sequenced Mycobacterium leprae uroporphyrinogen decarboxylase (EC 4.1.1.37) SW:DCUP_MYCLE (P46809) (357 aa); Fasta score E(): 0, 100.0% identity in 357 aa overlap. Also highly similar to many others including: Mycobacterium tuberculosis SW:DCUP_MYCTU (O53231) (357 aa); Fasta score E(): 0, 83.8% identity in 357 aa overlap and Bacillus subtilis SW:DCUP_BACSU (P32395) (353 aa); Fasta score E(): 0, 43.5% identity in 354 aa overlap. Contains Pfam match to entry PF01208 URO-D, Uroporphyrinogen decarboxylase (URO-D). Contains PS00907 Uroporphyrinogen decarboxylase signature 2. Contains PS00906 Uroporphyrinogen decarboxylase signature 1. uroporphyrinogen decarboxylase |
| [B] Mycobacterium leprae (strain Br4923) | MYCLB01034 | DCUP_MYCLB | Uroporphyrinogen decarboxylase |
| [B] Mycobacterium marinum (strain ATCC BAA-535 / M) | MYCMM01998 | DCUP_MYCMM | Uroporphyrinogen decarboxylase HemE |
| [B] Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | MYCS202600 | DCUP_MYCS2 | Uroporphyrinogen decarboxylase |
| [B] Mycobacterium sp. (strain JLS) | MYCSJ02155 | DCUP_MYCSJ | uroporphyrinogen decarboxylase KEGG: mmc:Mmcs_2212 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Mycobacterium sp. (strain KMS) | MYCSK02191 | DCUP_MYCSK | uroporphyrinogen decarboxylase KEGG: mmc:Mmcs_2212 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Mycobacterium sp. (strain MCS) | MYCSS02179 | Q1B9W4 | Uroporphyrinogen decarboxylase |
| [B] Mycobacterium bovis | MYCBO02688 | DCUP_MYCBO | Mb2697c, hemE, len: 357 aa. Equivalent to Rv2678c, len: 357 aa, from Mycobacterium tuberculosis strain H37Rv, (99.7% identity in 357 aa overlap). Probable hemE, uroporphyrinogen decarboxylase (EC 4.1.1.37), equivalent to P46809|DCUP_MYCLE|HEME|ML1043 UROPORPHYRINOGEN DECARBOXYLASE from Mycobacterium leprae (357 aa), FASTA scores: opt: 2017, E(): 8.2e-111, (83.75% identity in 357 aa overlap). Also highly similar to many e.g. O69861|DCUP_STRCO|HEME|SC1C3.19 from Streptomyces coelicolor (355 aa), FASTA scores: opt: 1165, E(): 5.6e-61, (58.15% identity in 349 aa overlap); P32395|DCUP_BACSU|HEME from Bacillus subtilis (353 aa), FASTA scores: opt: 859, E(): 4.5e-43, (44.1% identity in 356 aa overlap); Q9RV96|DCUP_DEIRA|HEME|DR1133 from Deinococcus radiodurans (344 aa), FASTA scores: opt: 850, E(): 1.5e-42, (43.0% identity in 349 aa overlap); etc. Equivalent to AAK47067 from Mycobacterium tuberculosis strain CDC1551 (372 aa) but shorter 15 aa. Contains PS00907 Uroporphyrinogen decarboxylase signature 2. BELONGS TO THE UROPORPHYRINOGEN DECARBOXYLASE FAMILY. PUTATIVE UROPORPHYRINOGEN DECARBOXYLASE HEME (UROPORPHYRINOGEN III DECARBOXYLASE) (URO-D) (UPD) |
| [B] Mycobacterium bovis (strain BCG / Paris 1173P2) | MYCBP02664 | DCUP_MYCBP | Putative uroporphyrinogen decarboxylase hemE |
| [B] Mycobacterium tuberculosis | MYCTU03815 | DCUP_MYCTU | Uroporphyrinogen decarboxylase |
| [B] Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) | MYCTA02729 | DCUP_MYCTA | Uroporphyrinogen decarboxylase |
| [B] Mycobacterium tuberculosis (strain F11) | MYCTF02612 | A5WQT1 | uroporphyrinogen decarboxylase hemE Mapped to H37Rv Rv2678c |
| [B] Mycobacterium ulcerans (strain Agy99) | MYCUA02690 | DCUP_MYCUA | uroporphyrinogen decarboxylase HemE membrane protein involved in porphyrin biosynthesis [catalytic activity: uroporphyrinogen III = coproporphyrinogen + 4 CO(2)] |
| [B] Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) | MYCVP02389 | DCUP_MYCVP | uroporphyrinogen decarboxylase KEGG: mmc:Mmcs_2212 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Nocardia farcinica | NOCFA03741 | DCUP_NOCFA | putative uroporphyrinogen decarboxylase |
| [B] Rhodococcus erythropolis (strain PR4 / NBRC 100887) | RHOE402839 | DCUP_RHOE4 | Uroporphyrinogen decarboxylase |
| [B] Rhodococcus opacus (strain B4) | RHOOB06838 | DCUP_RHOOB | Uroporphyrinogen decarboxylase |
| [B] Rhodococcus sp. (strain RHA1) | RHOSR06765 | ABG98630.1 | Uroporphyrinogen decarboxylase |
| [B] Acidothermus cellulolyticus (strain ATCC 43068 / 11B) | ACIC101378 | DCUP_ACIC1 | uroporphyrinogen decarboxylase KEGG: fra:Francci3_1334 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Frankia alni (strain ACN14a) | FRAAA02039 | Q0RNY5 | uroporphyrinogen decarboxylase (partial match) Evidence 2b : Function of strongly homologous gene; Product type e : enzyme |
| [B] Frankia sp. (strain CcI3) | FRASC01293 | DCUP_FRASC | uroporphyrinogen decarboxylase |
| [B] Frankia sp. (strain EAN1pec) | FRASN05010 | A8L0K0 | Uroporphyrinogen decarboxylase |
| [B] Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) | KINRD01579 | A6W8D2 | Uroporphyrinogen decarboxylase |
| [B] Tropheryma whipplei (strain TW08/27) | TROW800712 | DCUP_TROW8 | Similar to Mycobacterium tuberculosis uroporphyrinogen decarboxylase HemE or Rv2678c or mt2752 or mtv010.02C SWALL:DCUP_MYCTU (SWALL:O53231) (357 aa) fasta scores: E(): 5.9e-45, 42.81% id in 362 aa, and to Mus musculus uroporphyrinogen decarboxylase UroD SWALL:Q91VW4 (EMBL:BC008109) (367 aa) fasta scores: E(): 2.9e-36, 35.59% id in 354 aa uroporphyrinogen decarboxylase |
| [B] Tropheryma whipplei (strain Twist) | TROWT00733 | DCUP_TROWT | uroporphyrinogen decarboxylase |
| [B] Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) | CLAM300600 | A5CNH5 | Uroporphyrinogen decarboxylase |
| [B] Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) | CLAMS02734 | B0RBM4 | Uroporphyrinogen decarboxylase |
| [B] Leifsonia xyli (subsp. xyli) | LEIXX00081 | DCUP_LEIXX | identified by sequence similarity uroporphyrinogen decarboxylase |
| [B] Arthrobacter aurescens (strain TC1) | ARTAT02626 | A1R8A5 | Uroporphyrinogen decarboxylase |
| [B] Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) | ARTCA02454 | B8HBS1 | Uroporphyrinogen decarboxylase |
| [B] Arthrobacter sp. (strain FB24) | ARTS202745 | DCUP_ARTS2 | uroporphyrinogen decarboxylase KEGG: lxx:Lxx01040 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Kocuria rhizophila (strain ATCC 9341 / NBRC 12708 / DC2201) | KOCRD00845 | B2GL20 | Uroporphyrinogen decarboxylase |
| [B] Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) | RENSM01159 | A9WPH2 | Uroporphyrinogen decarboxylase |
| [B] Salinispora arenicola (strain CNS-205) | SALAI01433 | A8M838 | Uroporphyrinogen decarboxylase |
| [B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) | SALTO01510 | DCUP_SALTO | Uroporphyrinogen decarboxylase |
| [B] Nocardioides sp. (strain BAA-499 / JS614) | NOCSJ03600 | DCUP_NOCSJ | Uroporphyrinogen decarboxylase |
| [B] Propionibacterium acnes | PROAC00298 | Q6AB03 | uroporphyrinogen decarboxylase, HemE |
| [B] Saccharopolyspora erythraea (strain NRRL 23338) | SACEN01782 | DCUP_SACEN | Uroporphyrinogen decarboxylase |
| [B] Phytoplasma sp. (strain STRAWB1) | STRAW02228 | DCUP_STRAW | Uroporphyrinogen decarboxylase |
| [B] Streptomyces coelicolor | STRCO05995 | DCUP_STRCO | SC1C3.19, hemE, uroporphyrinogen decarboxylase, len: 355 aa; highly similar to many e.g. DCUP_ECOLI uroporphyrinogen decarboxylase (EC 4.1.1.37) (354 aa), fasta scores; opt: 879 z-score: 1073.9 E(): 0, 42.3% identity in 345 aa overlap. Contains PS00906 and PS00907 Uroporphyrinogen decarboxylase signatures 1 and 2 uroporphyrinogen decarboxylase |
| [B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) | STRGG01346 | DCUP_STRGG | Putative uroporphyrinogen decarboxylase |
| [B] Thermobifida fusca (strain YX) | THEFY01890 | DCUP_THEFY | uroporphyrinogen decarboxylase HemE |
| [B] Aquifex aeolicus | AQUAE00241 | DCUP_AQUAE | Uroporphyrinogen decarboxylase |
| [B] Hydrogenobaculum sp. (strain Y04AAS1) | HYDS001192 | DCUP_HYDS0 | Uroporphyrinogen decarboxylase |
| [B] Sulfurihydrogenibium sp. (strain YO3AOP1) | SULSY01047 | B2V9T3 | Uroporphyrinogen decarboxylase |
| [B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) | FLAJ100942 | DCUP_FLAJ1 | Uroporphyrinogen decarboxylase |
| [B] Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) | FLAPJ00041 | DCUP_FLAPJ | Uroporphyrinogen decarboxylase |
| [B] Gramella forsetii (strain KT0803) | GRAFK03148 | DCUP_GRAFK | uroporphyrinogen decarboxylase |
| [B] Salinibacter ruber (strain DSM 13855) | SALRD01651 | DCUP_SALRD | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) | CYTH300767 | DCUP_CYTH3 | uroporphyrinogen decarboxylase |
| [B] Chlamydia muridarum | CHLMU00120 | DCUP_CHLMU | similar to GB:X65867, GB:S60710, SP:P30566, PID:28904, and PID:28905; identified by sequence similarity; putative uroporphyrinogen decarboxylase |
| [B] Chlamydia trachomatis | CHLTR00765 | DCUP_CHLTR | Uroporphyrinogen Decarboxylase |
| [B] Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) | CHLTA00777 | DCUP_CHLTA | uroporphyrinogen decarboxylase |
| [B] Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B) | CHLT200116 | DCUP_CHLT2 | Uroporphyrinogen decarboxylase |
| [B] Chlamydia trachomatis (strain L2b/UCH-1/proctitis) | CHLTB00116 | DCUP_CHLTB | Uroporphyrinogen decarboxylase |
| [B] Chlamydia pneumoniae | CHLPN01309 | DCUP_CHLPN | Uroporphyrinogen decarboxylase |
| [B] Parachlamydia sp. (strain UWE25) (subsp. Acanthamoeba sp.) | PARUW01509 | DCUP_PARUW | strongly similar to uroporphyrinogen decarboxylase probable uroporphyrinogen decarboxylase |
| [B] Chlorobaculum parvum (strain NCIB 8327) | CHLP801879 | DCUP_CHLP8 | Uroporphyrinogen decarboxylase |
| [B] Chlorobium tepidum | CHLTE02007 | DCUP_CHLTE | Uroporphyrinogen decarboxylase |
| [B] Chlorobium chlorochromatii (strain CaD3) | CHLCH00128 | DCUP_CHLCH | Uroporphyrinogen decarboxylase HemE |
| [B] Chlorobium limicola (strain DSM 245 / NBRC 103803) | CHLL202241 | DCUP_CHLL2 | Uroporphyrinogen decarboxylase |
| [B] Chlorobium phaeobacteroides (strain BS1) | CHLPB00263 | DCUP_CHLPB | Uroporphyrinogen decarboxylase |
| [B] Chlorobium phaeobacteroides (strain DSM 266) | CHLPD00157 | DCUP_CHLPD | uroporphyrinogen decarboxylase KEGG: plt:Plut_1992 uroporphyrinogen decarboxylase HemE TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Prosthecochloris vibrioformis (strain DSM 265) | PROVI01613 | DCUP_PROVI | uroporphyrinogen decarboxylase KEGG: plt:Plut_1992 uroporphyrinogen decarboxylase HemE TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78) | CHLT300917 | DCUP_CHLT3 | Uroporphyrinogen decarboxylase |
| [B] Pelodictyon luteolum (strain DSM 273) | PELLD01933 | DCUP_PELLD | Uroporphyrinogen decarboxylase HemE |
| [B] Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) | PELPB02491 | DCUP_PELPB | Uroporphyrinogen decarboxylase |
| [B] Prosthecochloris aestuarii (strain DSM 271 / SK 413) | PROA200241 | DCUP_PROA2 | Uroporphyrinogen decarboxylase |
| [B] Chloroflexus aggregans (strain MD-66 / DSM 9485) | CHLAD01247 | DCUP_CHLAD | Uroporphyrinogen decarboxylase |
| [B] Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) | CHLSY02744 | DCUP_CHLSY | Uroporphyrinogen decarboxylase |
| [B] Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) | CHLAA02542 | DCUP_CHLAA | Uroporphyrinogen decarboxylase |
| [B] Roseiflexus castenholzii (strain DSM 13941 / HLO8) | ROSCS01971 | DCUP_ROSCS | uroporphyrinogen decarboxylase KEGG: rrs:RoseRS_1748 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Roseiflexus sp. (strain RS-1) | ROSS101680 | DCUP_ROSS1 | Uroporphyrinogen decarboxylase |
| [B] Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) | HERA203512 | A9B545 | Uroporphyrinogen decarboxylase |
| [B] Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) | THERP01330 | B9L2I2 | Uroporphyrinogen decarboxylase |
| [B] Acaryochloris marina (strain MBIC 11017) | ACAM106030 | B0C8L9 | Uroporphyrinogen decarboxylase |
| [B] Cyanothece (strain ATCC 51142) | CYAA502934 | DCUP_CYAA5 | Uroporphyrinogen decarboxylase |
| [B] Cyanothece sp. (strain PCC 7425 / ATCC 29141) | CYAP404057 | B8HJW8 | Uroporphyrinogen decarboxylase |
| [B] Gloeobacter violaceus | GLOVI03859 | DCUP_GLOVI | uroporphyrinogen decarboxylase |
| [B] Microcystis aeruginosa (strain NIES-843) | MICAN02907 | DCUP_MICAN | Uroporphyrinogen decarboxylase |
| [B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) | SYNP200809 | DCUP_SYNP2 | Uroporphyrinogen decarboxylase |
| [B] Synechococcus sp. (strain CC9311) | SYNS301847 | DCUP_SYNS3 | Uroporphyrinogen decarboxylase |
| [B] Synechococcus sp. (strain CC9605) | SYNSC00989 | DCUP_SYNSC | uroporphyrinogen decarboxylase |
| [B] Synechococcus sp. (strain CC9902) | SYNS900909 | DCUP_SYNS9 | Uroporphyrinogen decarboxylase HemE |
| [B] Synechococcus sp. (strain JA-2-3B'a(2-13)) | SYNJB01786 | DCUP_SYNJB | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Synechococcus sp. (strain JA-3-3Ab) | SYNJA00353 | DCUP_SYNJA | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Synechococcus sp. (strain PCC 6301) | SYNP600461 | DCUP_SYNP6 | uroporphyrinogen decarboxylase |
| [B] Synechococcus sp. (strain RCC307) | SYNR300918 | DCUP_SYNR3 | Uroporphyrinogen decarboxylase |
| [B] Synechococcus sp. (strain WH7803) | SYNPW00754 | DCUP_SYNPW | Uroporphyrinogen decarboxylase |
| [B] Synechococcus sp. (strain WH8102) | SYNPX01494 | DCUP_SYNPX | Uroporphyrinogen decarboxylase |
| [B] Synechocystis sp. (strain PCC 6803) | SYNY302822 | DCUP_SYNY3 | Uroporphyrinogen decarboxylase |
| [B] Thermosynechococcus elongatus (strain BP-1) | THEEB00722 | DCUP_THEEB | Uroporphyrinogen decarboxylase |
| [B] Anabaena variabilis (strain ATCC 29413 / PCC 7937) | ANAVT01752 | DCUP_ANAVT | Uroporphyrinogen decarboxylase HemE |
| [B] Anabaena sp. (strain PCC 7120) | ANASP03867 | DCUP_ANASP | Uroporphyrinogen decarboxylase |
| [B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102) | NOSP702243 | DCUP_NOSP7 | Uroporphyrinogen decarboxylase |
| [B] Trichodesmium erythraeum (strain IMS101) | TRIEI01400 | DCUP_TRIEI | Uroporphyrinogen decarboxylase |
| [B] Prochlorococcus marinus | PROMA01077 | DCUP_PROMA | Uroporphyrinogen decarboxylase |
| [B] Prochlorococcus marinus (strain AS9601) | PROMS00637 | DCUP_PROMS | Uroporphyrinogen decarboxylase (URO-D) COG407 Uroporphyrinogen-III decarboxylase [Coenzyme metabolism] |
| [B] Prochlorococcus marinus (strain MIT 9211) | PROM401069 | DCUP_PROM4 | Uroporphyrinogen decarboxylase |
| [B] Prochlorococcus marinus (strain MIT 9215) | PROM200662 | DCUP_PROM2 | Uroporphyrinogen decarboxylase |
| [B] Prochlorococcus marinus (strain MIT 9301) | PROM000610 | DCUP_PROM0 | Uroporphyrinogen decarboxylase (URO-D) COG407 Uroporphyrinogen-III decarboxylase [Coenzyme metabolism] |
| [B] Prochlorococcus marinus (strain MIT 9303) | PROM301816 | DCUP_PROM3 | Uroporphyrinogen decarboxylase |
| [B] Prochlorococcus marinus (strain MIT 9312) | PROM900608 | DCUP_PROM9 | Uroporphyrinogen decarboxylase |
| [B] Prochlorococcus marinus (strain MIT 9313) | PROMM00445 | DCUP_PROMM | Uroporphyrinogen decarboxylase (URO-D) |
| [B] Prochlorococcus marinus (strain MIT 9515) | PROM500648 | DCUP_PROM5 | Uroporphyrinogen decarboxylase (URO-D) COG407 Uroporphyrinogen-III decarboxylase [Coenzyme metabolism] |
| [B] Prochlorococcus marinus (strain NATL1A) | PROM100633 | DCUP_PROM1 | Uroporphyrinogen decarboxylase |
| [B] Prochlorococcus marinus (strain NATL2A) | PROMT00616 | DCUP_PROMT | Uroporphyrinogen decarboxylase HemE |
| [B] Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) | PROMP00639 | DCUP_PROMP | Uroporphyrinogen decarboxylase |
| [B] Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) | DEIDV00569 | C1D0J2 | Putative uroporphyrinogen decarboxylase |
| [B] Deinococcus radiodurans | DEIRA01107 | DCUP_DEIRA | Uroporphyrinogen decarboxylase |
| [B] Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) | THET200232 | DCUP_THET2 | Uroporphyrinogen decarboxylase |
| [B] Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) | THET800598 | DCUP_THET8 | Uroporphyrinogen decarboxylase |
| [B] Bacillus amyloliquefaciens (strain FZB42) | BACA200950 | DCUP_BACA2 | HemE |
| [B] Bacillus anthracis | BACAN00987 | DCUP_BACAN | similar to SP:P32395, GB:Z11687, GB:L22206, GB:U04357, SP:P30518, PID:1302659, PID:28418, PID:398043, and PID:532760; identified by sequence similarity; putative uroporphyrinogen decarboxylase |
| [B] Bacillus cereus (strain AH187) | BACC701063 | DCUP_BACC7 | Uroporphyrinogen decarboxylase |
| [B] Bacillus cereus (strain ATCC 10987) | BACC101153 | DCUP_BACC1 | identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Bacillus cereus (strain ATCC 14579 / DSM 31) | BACCR00942 | DCUP_BACCR | Uroporphyrinogen decarboxylase |
| [B] Bacillus cereus (strain G9842) | BACC200978 | DCUP_BACC2 | Uroporphyrinogen decarboxylase |
| [B] Bacillus cereus (strain ZK) | BACCZ00968 | DCUP_BACCZ | uroporphyrinogen decarboxylase |
| [B] Bacillus cereus subsp. cytotoxis (strain NVH 391-98) | BACCN00784 | ABS21160.1 | Uroporphyrinogen decarboxylase |
| [B] Bacillus clausii (strain KSM-K16) | BACSK01526 | Q5WHT2 | uroporphyrinogen decarboxylase |
| [B] Bacillus halodurans | BACHD01181 | DCUP_BACHD | uroporphyrinogen III decarboxylase |
| [B] Bacillus licheniformis (strain DSM 13 / ATCC 14580) | BACLD01006 | Q62X56 | InterProMatches:IPR006361; Molecular Function: uroporphyrinogen decarboxylase activity (GO:0004853), Biological Process: porphyrin biosynthesis (GO:0006779) uroporphyrinogen III decarboxylase |
| [B] Bacillus pumilus (strain SAFR-032) | BACP200940 | DCUP_BACP2 | Uroporphyrinogen decarboxylase |
| [B] Bacillus subtilis | BACSU01011 | DCUP_BACSU | Uroporphyrinogen decarboxylase |
| [B] Bacillus thuringiensis (strain Al Hakam) | BACAH00890 | ABK84316.1 | uroporphyrinogen decarboxylase |
| [B] Bacillus thuringiensis (subsp. konkukian) | BACHK00959 | DCUP_BACHK | uroporphyrinogen decarboxylase |
| [B] Bacillus weihenstephanensis (strain KBAB4) | BACWK00972 | DCUP_BACWK | Uroporphyrinogen decarboxylase |
| [B] Geobacillus kaustophilus | GEOKA00653 | BAD74946.1 | uroporphyrinogen decarboxylase |
| [B] Geobacillus thermodenitrificans (strain NG80-2) | GEOTN00558 | DCUP_GEOTN | Uroporphyrinogen decarboxylase |
| [B] Lysinibacillus sphaericus (strain C3-41) | LYSSC00389 | B1HVL6 | Uroporphyrinogen decarboxylase |
| [B] Oceanobacillus iheyensis | OCEIH01164 | DCUP_OCEIH | CDS_ID OB1167 uroporphyrinogen decarboxylase |
| [B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) | EXIS200690 | B1YKJ7 | Uroporphyrinogen decarboxylase |
| [B] Listeria innocua | LISIN02291 | DCUP_LISIN | similar to uroporphyrinogen III decarboxylase |
| [B] Listeria monocytogenes | LISMO02208 | DCUP_LISMO | similar to uroporphyrinogen III decarboxylase |
| [B] Listeria monocytogenes (serotype 4b / strain F2365) | LISMF02220 | DCUP_LISMF | identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Listeria monocytogenes serotype 4a (strain HCC23) | LISMH00323 | DCUP_LISMH | Uroporphyrinogen decarboxylase |
| [B] Listeria monocytogenes serotype 4b (strain Clip81459) | LISMC02203 | DCUP_LISMC | Putative uroporphyrinogen III decarboxylase |
| [B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) | LISW602224 | DCUP_LISW6 | HemE protein |
| [B] Macrococcus caseolyticus (strain JCSC5402) | MACCJ01552 | B9E7T9 | Uroporphyrinogen decarboxylase |
| [B] Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) | BREBN01811 | C0ZAI2 | Uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain COL) | STAAC01840 | DCUP_STAAC | identified by similarity to EGAD:21032; match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain JH1) | STAA201866 | DCUP_STAA2 | uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) KEGG: sao:SAOUHSC_01962 uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain JH9) | STAA901838 | DCUP_STAA9 | uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Staphylococcus aureus (strain MRSA252) | STAAR01862 | DCUP_STAAR | Similar to Bacillus subtilis uroporphyrinogen decarboxylase HemE SW:DCUP_BACSU (P32395) (353 aa) fasta scores: E(): 1.1e-96, 70.5% id in 339 aa, and to Bacillus halodurans uroporphyrinogen III decarboxylase BH1202 TR:Q9KDL0 (EMBL:AP001511) (344 aa) fasta scores: E(): 4.9e-94, 68.51% id in 343 aa uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain MSSA476) | STAAS01763 | DCUP_STAAS | Ortholog of S. aureus MRSA252 (BX571856) SAR1925 uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain MW2) | STAAW01773 | DCUP_STAAW | uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain Mu3 / ATCC 700698) | STAA101802 | DCUP_STAA1 | Uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain Mu50 / ATCC 700699) | STAAM01819 | DCUP_STAAM | uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain N315) | STAAN01685 | DCUP_STAAN | uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain NCTC 8325) | STAA801850 | DCUP_STAA8 | uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain Newman) | STAAE01683 | DCUP_STAAE | Uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain USA300 / TCH1516) | STAAT01781 | DCUP_STAAT | uroporphyrinogen decarboxylase |
| [B] Staphylococcus aureus (strain USA300) | STAA301741 | DCUP_STAA3 | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Staphylococcus aureus (strain bovine RF122) | STAAB01756 | DCUP_STAAB | uroporphyrinogen decarboxylase |
| [B] Staphylococcus epidermidis (strain ATCC 12228) | STAES01487 | DCUP_STAES | Uroporphyrinogen decarboxylase |
| [B] Staphylococcus epidermidis (strain ATCC 35984 / RP62A) | STAEQ01319 | DCUP_STAEQ | identified by similarity to EGAD:21032; match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Staphylococcus haemolyticus (strain JCSC1435) | STAHJ01097 | DCUP_STAHJ | uroporphyrinogen decarboxylase |
| [B] Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) | STAS100964 | DCUP_STAS1 | similar to gi|57284808|gb|AAW36902.1| [Staphylococcus aureus subsp. aureus COL], percent identity 83 in 344 aa, BLASTP E(): e-171 uroporphyrinogen-III decarboxylase |
| [B] Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) | CARHZ00468 | DCUP_CARHZ | identified by similarity to SP:P29680; match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Caulobacter crescentus | CAUCR03714 | DCUP_CAUCR | Uroporphyrinogen decarboxylase |
| [B] Caulobacter sp. (strain K31) | CAUSK04931 | B0T6D3 | Uroporphyrinogen decarboxylase |
| [B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) | BEII903457 | B2IG52 | Uroporphyrinogen decarboxylase |
| [B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) | METSB02471 | B8EM69 | Uroporphyrinogen decarboxylase |
| [B] Bradyrhizobium japonicum | BRAJA02354 | DCUP_BRAJA | Uroporphyrinogen decarboxylase |
| [B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) | BRASB02049 | DCUP_BRASB | Uroporphyrinogen decarboxylase |
| [B] Bradyrhizobium sp. (strain ORS278) | BRASO01767 | DCUP_BRASO | Uroporphyrinogen decarboxylase |
| [B] Nitrobacter hamburgensis (strain X14 / DSM 10229) | NITHX02760 | DCUP_NITHX | uroporphyrinogen decarboxylase |
| [B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) | NITWN00923 | Q3SU02 | uroporphyrinogen decarboxylase HemE |
| [B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) | OLICO03078 | B6JII7 | Uroporphyrinogen decarboxylase |
| [B] Rhodopseudomonas palustris | RHOPA01505 | Q6N9N1 | observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished uroporphyrinogen decarboxylase |
| [B] Rhodopseudomonas palustris (strain BisA53) | RHOP501291 | DCUP_RHOP5 | uroporphyrinogen decarboxylase KEGG: rpc:RPC_1258 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Rhodopseudomonas palustris (strain BisB18) | RHOPB01234 | Q219W6 | uroporphyrinogen decarboxylase |
| [B] Rhodopseudomonas palustris (strain BisB5) | RHOPS03743 | DCUP_RHOPS | uroporphyrinogen decarboxylase |
| [B] Rhodopseudomonas palustris (strain HaA2) | RHOP203993 | DCUP_RHOP2 | uroporphyrinogen decarboxylase |
| [B] Rhodopseudomonas palustris (strain TIE-1) | RHOPT01660 | B3Q6E7 | Uroporphyrinogen decarboxylase |
| [B] Brucella abortus | BRUAB01909 | DCUP_BRUAB | similar to BR2066, uroporphyrinogen decarboxylase HemE, uroporphyrinogen decarboxylase |
| [B] Brucella abortus (strain 2308) | BRUA202052 | DCUP_BRUA2 | Uroporphyrinogen decarboxylase (URO-D):Uroporphyrinogen decarboxylase HemE |
| [B] Brucella abortus (strain S19) | BRUA101845 | DCUP_BRUA1 | Uroporphyrinogen decarboxylase |
| [B] Brucella canis (strain ATCC 23365 / NCTC 10854) | BRUC201976 | DCUP_BRUC2 | Uroporphyrinogen decarboxylase |
| [B] Brucella melitensis | BRUME00001 | DCUP_BRUME | Uroporphyrinogen decarboxylase |
| [B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) | BRUO201770 | DCUP_BRUO2 | Uroporphyrinogen decarboxylase |
| [B] Brucella suis | BRUSU01985 | DCUP_BRUSU | identified by match to TIGR protein family HMM TIGR01463 uroporphyrinogen decarboxylase |
| [B] Brucella suis (strain ATCC 23445 / NCTC 10510) | BRUSI01789 | DCUP_BRUSI | uroporphyrinogen decarboxylase GO_function: uroporphyrinogen decarboxylase activity [GO ID 0004853]; GO_process: porphyrin biosynthetic process [GO ID 0006779] |
| [B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) | OCHA400841 | DCUP_OCHA4 | Uroporphyrinogen decarboxylase |
| [B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) | METC401653 | B7KUD0 | uroporphyrinogen decarboxylase KEGG: mex:Mext_1494 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Methylobacterium extorquens (strain PA1) | METEP01461 | A9W2T9 | Uroporphyrinogen decarboxylase |
| [B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) | METPB01453 | B1ZF87 | Uroporphyrinogen decarboxylase |
| [B] Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) | METRJ04220 | B1M3C5 | Uroporphyrinogen decarboxylase |
| [B] Methylobacterium sp. (strain 4-46) | METS400977 | B0UD84 | Uroporphyrinogen decarboxylase |
| [B] Mesorhizobium sp. (strain BNC1) | MESSB03440 | DCUP_MESSB | uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) KEGG: mlo:mll4487 uroporphyrinogen decarboxylase |
| [B] Rhizobium loti | RHILO03448 | DCUP_RHILO | uroporphyrinogen decarboxylase |
| [B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) | PARL101200 | A7HSJ4 | Uroporphyrinogen decarboxylase |
| [B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868) | AGRRK03739 | B9JEW7 | Uroporphyrinogen decarboxylase |
| [B] Agrobacterium tumefaciens (strain C58 / ATCC 33970) | AGRT502759 | DCUP_AGRT5 | Uroporphyrinogen decarboxylase |
| [B] Rhizobium etli (strain CFN 42 / ATCC 51251) | RHIEC04033 | Q2K2R7 | uroporphyrinogen decarboxylase protein similar to hemE (SMc02794) [Sinorhizobium meliloti] Similar to swissprot:Q92KV8 Putative location:bacterial cytoplasm Psort-Score: 0.1514; go_function: lyase activity [goid 0016829]; go_function: uroporphyrinogen decarboxylase activity [goid 0004853]; go_process: porphyrin biosynthesis [goid 0006779] |
| [B] Rhizobium etli (strain CIAT 652) | RHIE604356 | B3PS56 | Uroporphyrinogen decarboxylase protein |
| [B] Rhizobium leguminosarum bv. trifolii (strain WSM2304) | RHILW03884 | B5ZV50 | Uroporphyrinogen decarboxylase |
| [B] Rhizobium leguminosarum bv. viciae (strain 3841) | RHIL304725 | DCUP_RHIL3 | putative uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase similarity:fasta; with=UniProt:DCUP_RHOCA (EMBL:RC16796); Rhodobacter capsulatus (Rhodopseudomonas capsulata).; hemE;; Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD). Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD).; length=344; id 50.621; 322 aa overlap; query 1-318; subject 23-344 similarity:fasta; with=UniProt:Q92KV8_RHIME (EMBL:SME591793); Rhizobium meliloti (Sinorhizobium meliloti).; PROBABLE UROPORPHYRINOGEN DECARBOXYLASE PROTEIN (EC 4.1.1.37).; length=319; id 81.073; 317 aa overlap; query 1-317; subject 1-317 |
| [B] Rhizobium meliloti | RHIME03295 | Q92KV8 | Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE UROPORPHYRINOGEN DECARBOXYLASE PROTEIN |
| [B] Sinorhizobium medicae (strain WSM419) | SINMW03148 | DCUP_SINMW | Uroporphyrinogen decarboxylase |
| [B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) | AZOC504706 | A8I280 | Uroporphyrinogen decarboxylase |
| [B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) | XANP201765 | A7IGC8 | Uroporphyrinogen decarboxylase |
| [B] Hyphomonas neptunium (strain ATCC 15444) | HYPNA03499 | DCUP_HYPNA | Uroporphyrinogen decarboxylase |
| [B] Maricaulis maris (strain MCS10) | MARMM02955 | DCUP_MARMM | Uroporphyrinogen decarboxylase |
| [B] Dinoroseobacter shibae (strain DFL 12) | DINSH02671 | DCUP_DINSH | Uroporphyrinogen decarboxylase |
| [B] Jannaschia sp. (strain CCS1) | JANSC03832 | DCUP_JANSC | uroporphyrinogen decarboxylase |
| [B] Paracoccus denitrificans (strain Pd 1222) | PARDP03519 | DCUP_PARDP | uroporphyrinogen decarboxylase KEGG: rde:RD1_1284 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) | RHOS402285 | DCUP_RHOS4 | Citation: Biochem J. 1993 293:703-12. Uroporphyrinogen decarboxylase |
| [B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) | RHOS500534 | DCUP_RHOS5 | Uroporphyrinogen decarboxylase |
| [B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) | RHOS102298 | DCUP_RHOS1 | uroporphyrinogen decarboxylase KEGG: rsp:RSP_0680 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085) | RHOSK02016 | DCUP_RHOSK | Uroporphyrinogen decarboxylase |
| [B] Roseobacter denitrificans (strain ATCC 33942 / OCh 114) | ROSDO01189 | DCUP_ROSDO | uroporphyrinogen decarboxylase |
| [B] Silicibacter pomeroyi | SILPO03556 | DCUP_SILPO | identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Silicibacter sp. (strain TM1040) | SILST02518 | DCUP_SILST | uroporphyrinogen decarboxylase KEGG: sil:SPO3648 uroporphyrinogen decarboxylase, ev=1e-165, 83% identity TIGRFAM: uroporphyrinogen decarboxylase: (7.9e-184) PFAM: Uroporphyrinogen decarboxylase (URO-D): (3e-155) |
| [B] Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) | GLUDA01172 | DCUP_GLUDA | Uroporphyrinogen decarboxylase |
| [B] Gluconobacter oxydans | GLUOX00997 | DCUP_GLUOX | Uroporphyrinogen decarboxylase |
| [B] Granulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) | GRABC00002 | DCUP_GRABC | Uroporphyrinogen decarboxylase |
| [B] Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) | MAGMM04494 | BAE53354.1 | Uroporphyrinogen decarboxylase |
| [B] Rhodospirillum centenum (strain ATCC 51521 / SW) | RHOCS02716 | B6IV46 | Uroporphyrinogen decarboxylase |
| [B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) | RHORT03602 | DCUP_RHORT | Uroporphyrinogen decarboxylase HemE |
| [B] Ehrlichia canis (strain Jake) | EHRCJ00010 | Q3YT94 | Uroporphyrinogen decarboxylase HemE |
| [B] Ehrlichia ruminantium (strain Gardel) | EHRRG00005 | Q5FF08 | Similar to sp|Q92FV3|DCUP_RICCN sp|Q9ZC83|DCUP_RICPR; Ortholog to ERWE_CDS_00050 Uroporphyrinogen decarboxylase |
| [B] Ehrlichia ruminantium (strain Welgevonden) | EHRRW00005 | Q5HCF9 | Similar to sp|Q92FV3|DCUP_RICCN sp|Q9ZC83|DCUP_RICPR; Ortholog to ERGA_CDS_00050 Uroporphyrinogen decarboxylase |
| [B] Orientia tsutsugamushi (strain Boryong) | ORITB00821 | DCUP_ORITB | Uroporphyrinogen decarboxylase |
| [B] Orientia tsutsugamushi (strain Ikeda) | ORITI00359 | DCUP_ORITI | Uroporphyrinogen decarboxylase |
| [B] Rickettsia akari (strain Hartford) | RICAH01255 | DCUP_RICAH | Uroporphyrinogen decarboxylase |
| [B] Rickettsia bellii (strain OSU 85-389) | RICB801441 | DCUP_RICB8 | Uroporphyrinogen decarboxylase |
| [B] Rickettsia bellii (strain RML369-C) | RICBR01393 | DCUP_RICBR | Uroporphyrinogen decarboxylase |
| [B] Rickettsia canadensis (strain McKiel) | RICCK01091 | DCUP_RICCK | Uroporphyrinogen decarboxylase |
| [B] Rickettsia felis | RICFE01357 | DCUP_RICFE | Uroporphyrinogen decarboxylase |
| [B] Rickettsia massiliae (strain Mtu5) | RICM500957 | ABV85317.1 | Uroporphyrinogen decarboxylase |
| [B] Rickettsia prowazekii | RICPR00834 | DCUP_RICPR | UROPORPHYRINOGEN DECARBOXYLASE (hemE) |
| [B] Rickettsia rickettsii (strain Iowa) | RICRO01384 | DCUP_RICRO | uroporphyrinogen decarboxylase |
| [B] Rickettsia rickettsii (strain Sheila Smith) | RICRS01345 | DCUP_RICRS | Uroporphyrinogen decarboxylase |
| [B] Rickettsia typhi | RICTY00836 | DCUP_RICTY | uroporphyrinogen decarboxylase |
| [B] Rickettsia conorii | RICCN01374 | DCUP_RICCN | Uroporphyrinogen decarboxylase |
| [B] Wolbachia pipientis subsp. Culex pipiens (strain wPip) | WOLPP00728 | DCUP_WOLPP | Uroporphyrinogen decarboxylase |
| [B] Wolbachia pipientis wMel | WOLPM00890 | DCUP_WOLPM | Identified by match to TIGR01464 protein family HMM TIGR01464; match to PF01208 protein family HMM PF01208 uroporphyrinogen decarboxylase |
| [B] Wolbachia sp. (subsp. Brugia malayi) (strain TRS) | WOLTR00001 | DCUP_WOLTR | Uroporphyrinogen-III decarboxylase |
| [B] Wolbachia sp. subsp. Drosophila simulans (strain wRi) | WOLWR00719 | DCUP_WOLWR | Uroporphyrinogen decarboxylase |
| [B] Pelagibacter ubique | PELUB00342 | Q1V1A2 | uroporphyrinogen decarboxylase |
| [B] Erythrobacter litoralis (strain HTCC2594) | ERYLH02589 | DCUP_ERYLH | uroporphyrinogen decarboxylase COG0407 Uroporphyrinogen-III decarboxylase |
| [B] Novosphingobium aromaticivorans (strain DSM 12444) | NOVAD00118 | DCUP_NOVAD | Uroporphyrinogen decarboxylase |
| [B] Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) | SPHWW02802 | DCUP_SPHWW | Uroporphyrinogen decarboxylase |
| [B] Sphingopyxis alaskensis | SPHAL02810 | DCUP_SPHAL | uroporphyrinogen decarboxylase |
| [B] Zymomonas mobilis | ZYMMO01987 | Q5NKY8 | COG0407 uroporphyrinogen decarboxylase |
| [B] Bordetella avium (strain 197N) | BORA103191 | Q2KU39 | uroporphyrinogen decarboxylase start codon not provided |
| [B] Bordetella bronchiseptica | BORBR04559 | DCUP_BORBR | ortholog of Bordetella pertussis (BX470248) BP3291 uroporphyrinogen decarboxylase |
| [B] Bordetella parapertussis | BORPA04073 | DCUP_BORPA | ortholog of Bordetella pertussis (BX470248) BP3291 uroporphyrinogen decarboxylase |
| [B] Bordetella pertussis | BORPE03010 | DCUP_BORPE | Similar to Escherichia coli uroporphyrinogen decarboxylase HemE or b3997 SW:DCUP_ECOLI (P29680) (354 aa) fasta scores: E(): 1.8e-84, 61.93% id in 352 aa uroporphyrinogen decarboxylase |
| [B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) | BORPD00338 | DCUP_BORPD | Uroporphyrinogen decarboxylase |
| [B] Burkholderia ambifaria (strain MC40-6) | BURA400109 | B1YQL8 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia cenocepacia (strain AU 1054) | BURCA02905 | Q1BRB5 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia cenocepacia (strain HI2424) | BURCH00109 | A0K2Y8 | uroporphyrinogen decarboxylase KEGG: bcn:Bcen_2944 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Burkholderia cenocepacia (strain MC0-3) | BURCC00124 | B1JSW1 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia cepacia (strain ATCC 53795 / AMMD) | BURCM00101 | Q0BJL1 | uroporphyrinogen decarboxylase KEGG: bur:Bcep18194_A3292 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Burkholderia cepacia (strain J2315 / LMG 16656) | BURCJ00041 | DCUP_BURCJ | uroporphyrinogen decarboxylase |
| [B] Burkholderia multivorans (strain ATCC 17616 / 249) | BURM103229 | B3CWI2 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia sp. (strain 383) | BURS300111 | Q39KX2 | Uroporphyrinogen decarboxylase HemE |
| [B] Burkholderia vietnamiensis (strain G4 / LMG 22486) | BURVG00111 | ABO53143.1 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia mallei | BURMA02474 | Q62FR1 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia mallei (strain NCTC 10229) | BURM901495 | DCUP_BURM9 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia mallei (strain NCTC 10247) | BURM702826 | DCUP_BURM7 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia mallei (strain SAVP1) | BURMS03127 | DCUP_BURMS | Uroporphyrinogen decarboxylase |
| [B] Burkholderia phymatum (strain DSM 17167 / STM815) | BURP802994 | B2JJ91 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia phytofirmans (strain DSM 17436 / PsJN) | BURPP03798 | DCUP_BURPP | Uroporphyrinogen decarboxylase |
| [B] Burkholderia pseudomallei | BURPS03400 | DCUP_BURPS | Similar to Escherichia coli uroporphyrinogen decarboxylase HemE or b3997 SWALL:DCUP_ECOLI (SWALL:P29680) (354 aa) fasta scores: E(): 6.2e-82, 62.39% id in 351 aa uroporphyrinogen decarboxylase |
| [B] Burkholderia pseudomallei (strain 1106a) | BURP003944 | DCUP_BURP0 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia pseudomallei (strain 1710b) | BURP100163 | Q3JXW7 | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Burkholderia pseudomallei (strain 668) | BURP603894 | DCUP_BURP6 | Uroporphyrinogen decarboxylase |
| [B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) | BURTA03165 | DCUP_BURTA | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Burkholderia xenovorans (strain LB400) | BURXL04249 | DCUP_BURXL | Uroporphyrinogen decarboxylase HemE |
| [B] Cupriavidus taiwanensis (strain R1 / LMG 19424) | CUPTR03013 | B3R7L1 | Uroporphyrinogen decarboxylase |
| [B] Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) | RALEH03532 | CAJ94690.1 | uroporphyrinogen decarboxylase |
| [B] Ralstonia eutropha (strain JMP134) | RALEJ03308 | DCUP_RALEJ | Uroporphyrinogen decarboxylase HemE |
| [B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) | RALME03412 | DCUP_RALME | uroporphyrinogen decarboxylase |
| [B] Polynucleobacter necessarius (strain STIR1) | POLNS00023 | B1XSD6 | Uroporphyrinogen decarboxylase |
| [B] Polynucleobacter sp. (strain QLW-P1DMWA-1) | POLSQ00028 | A4SUT6 | Uroporphyrinogen decarboxylase |
| [B] Ralstonia pickettii (strain 12J) | RALPJ03385 | DCUP_RALPJ | Uroporphyrinogen decarboxylase |
| [B] Ralstonia solanacearum | RALSO03269 | DCUP_RALSO | Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE UROPORPHYRINOGEN DECARBOXYLASE PROTEIN |
| [B] Acidovorax avenae subsp. citrulli (strain AAC00-1) | ACIAC04283 | ABM35008.1 | uroporphyrinogen decarboxylase KEGG: rfr:Rfer_0821 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Acidovorax sp. (strain JS42) | ACISJ03601 | DCUP_ACISJ | uroporphyrinogen decarboxylase KEGG: rfr:Rfer_0821 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Delftia acidovorans (strain DSM 14801 / SPH-1) | DELAS00565 | DCUP_DELAS | Uroporphyrinogen decarboxylase |
| [B] Diaphorobacter sp. (strain TPSY) | DIAST03060 | DCUP_DIAST | Uroporphyrinogen decarboxylase |
| [B] Polaromonas naphthalenivorans (strain CJ2) | POLNA00353 | DCUP_POLNA | Uroporphyrinogen decarboxylase |
| [B] Polaromonas sp. (strain JS666 / ATCC BAA-500) | POLSJ04176 | DCUP_POLSJ | uroporphyrinogen decarboxylase |
| [B] Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) | RHOFD00808 | DCUP_RHOFD | uroporphyrinogen decarboxylase |
| [B] Verminephrobacter eiseniae (strain EF01-2) | VEREI00010 | DCUP_VEREI | Uroporphyrinogen decarboxylase |
| [B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) | LEPCP03483 | B1Y3S5 | Uroporphyrinogen decarboxylase |
| [B] Methylibium petroleiphilum (strain PM1) | METPP00134 | DCUP_METPP | Uroporphyrinogen decarboxylase |
| [B] Herminiimonas arsenicoxydans | HERAR03235 | DCUP_HERAR | Uroporphyrinogen decarboxylase |
| [B] Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) | JANMA03605 | DCUP_JANMA | Uroporphyrinogen decarboxylase |
| [B] Thiobacillus denitrificans (strain ATCC 25259) | THIDA02778 | Q3SER3 | uroporphyrinogen decarboxylase HemE |
| [B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875) | METFK02513 | DCUP_METFK | uroporphyrinogen decarboxylase |
| [B] Chromobacterium violaceum | CHRVO01122 | NP_900792.1 | identified by sequence similarity; putative; ORF located using Blastx/COG0407 uroporphyrinogen decarboxylase |
| [B] Laribacter hongkongensis (strain HLHK9) | LARHH02772 | C1DDG8 | DcuP |
| [B] Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) | NEIG100332 | DCUP_NEIG1 | Best Blastp Hit: pir||F81946 probable uroporphyrinogen decarboxylase (EC 4.1.1.37) NMA0991 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7379694|emb|CAB84261.1| (AL162754) putative uroporphyrinogen decarboxylase [Neisseria meningitidis] COG0407 Uroporphyrinogen-III decarboxylase putative uroporphyrinogen decarboxylase |
| [B] Neisseria gonorrhoeae (strain NCCP11945) | NEIG200508 | DCUP_NEIG2 | Putative uroporphyrinogen decarboxylase |
| [B] Neisseria meningitidis serogroup A | NEIMA00880 | DCUP_NEIMA | Putative uroporphyrinogen decarboxylase |
| [B] Neisseria meningitidis serogroup B | NEIMB00739 | DCUP_NEIMB | Uroporphyrinogen decarboxylase |
| [B] Neisseria meningitidis serogroup C (strain 053442) | NEIM000695 | DCUP_NEIM0 | uroporphyrinogen decarboxylase Code: H; COG: COG0407 |
| [B] Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) | NEIMF00675 | DCUP_NEIMF | Putative uroporphyrinogen decarboxylase |
| [B] Nitrosomonas europaea | NITEU00431 | DCUP_NITEU | Uroporphyrinogen decarboxylase (URO-D) |
| [B] Nitrosomonas eutropha (strain C71) | NITEC00576 | DCUP_NITEC | uroporphyrinogen decarboxylase KEGG: neu:NE0445 uroporphyrinogen decarboxylase (URO-D) TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) | NITMU00684 | DCUP_NITMU | uroporphyrinogen decarboxylase |
| [B] Azoarcus sp. (strain BH72) | AZOSB03967 | DCUP_AZOSB | uroporphyrinogen decarboxylase Uroporphyrinogen decarboxylase (URO-D) (UPD). catalytic activity: uroporphyrinogen-iii = coproporphyrinogen + 4 co(2). pathway: porphyrin biosynthesis. High confidence in function and specificity |
| [B] Azoarcus sp. (strain EbN1) | AZOSE01537 | DCUP_AZOSE | Uroporphyrinogen decarboxylase |
| [B] Dechloromonas aromatica (strain RCB) | DECAR00032 | DCUP_DECAR | Uroporphyrinogen decarboxylase HemE |
| [B] Desulfotalea psychrophila | DESPS01280 | DCUP_DESPS | probable uroporphyrinogen decarboxylase |
| [B] Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) | GEOBB00014 | DCUP_GEOBB | Uroporphyrinogen decarboxylase |
| [B] Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) | GEOLS03170 | DCUP_GEOLS | Uroporphyrinogen decarboxylase |
| [B] Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) | GEOMG00015 | DCUP_GEOMG | Uroporphyrinogen decarboxylase HemE |
| [B] Geobacter sulfurreducens | GEOSL03401 | DCUP_GEOSL | Uroporphyrinogen decarboxylase |
| [B] Geobacter uraniumreducens (strain Rf4) | GEOUR00015 | DCUP_GEOUR | Uroporphyrinogen decarboxylase |
| [B] Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) | PELCD00843 | DCUP_PELCD | Uroporphyrinogen decarboxylase |
| [B] Pelobacter propionicus (strain DSM 2379) | PELPD00594 | DCUP_PELPD | uroporphyrinogen decarboxylase KEGG: gme:Gmet_0016 uroporphyrinogen decarboxylase HemE TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Anaeromyxobacter dehalogenans (strain 2CP-C) | ANADE01084 | ABC80863.1 | uroporphyrinogen decarboxylase |
| [B] Anaeromyxobacter sp. (strain Fw109-5) | ANADF01116 | ABS25336.1 | Uroporphyrinogen decarboxylase |
| [B] Anaeromyxobacter sp. (strain K) | ANASK01135 | B4UGV5 | Uroporphyrinogen decarboxylase |
| [B] Myxococcus xanthus (strain DK 1622) | MYXXD05163 | DCUP_MYXXD | uroporphyrinogen decarboxylase identified by similarity to SP:P29680; match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Sorangium cellulosum (strain So ce56) | SORC508594 | DCUP_SORC5 | Putative Uroporphyrinogen decarboxylase |
| [B] Arcobacter butzleri (strain RM4018) | ARCB401738 | DCUP_ARCB4 | Uroporphyrinogen decarboxylase |
| [B] Campylobacter concisus (strain 13826) | CAMC101352 | DCUP_CAMC1 | Uroporphyrinogen decarboxylase |
| [B] Campylobacter curvus (strain 525.92) | CAMC501433 | DCUP_CAMC5 | Uroporphyrinogen decarboxylase |
| [B] Campylobacter fetus subsp. fetus (strain 82-40) | CAMFF01379 | DCUP_CAMFF | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) | CAMHC01197 | DCUP_CAMHC | Uroporphyrinogen decarboxylase |
| [B] Campylobacter jejuni | CAMJE01177 | DCUP_CAMJE | Uroporphyrinogen decarboxylase |
| [B] Campylobacter jejuni (strain RM1221) | CAMJR01335 | DCUP_CAMJR | identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) | CAMJD00379 | DCUP_CAMJD | Uroporphyrinogen decarboxylase |
| [B] Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) | CAMJJ01189 | DCUP_CAMJJ | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) | CAMJ801180 | DCUP_CAMJ8 | Uroporphyrinogen decarboxylase |
| [B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) | CAMLR00496 | DCUP_CAMLR | Uroporphyrinogen decarboxylase |
| [B] Helicobacter acinonychis (strain Sheeba) | HELAH01238 | DCUP_HELAH | uroporphyrinogen decarboxylase Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD) High confidence in function and specificity |
| [B] Helicobacter hepaticus | HELHP01867 | DCUP_HELHP | uroporphyrinogen decarboxylase |
| [B] Helicobacter pylori | HELPY00595 | DCUP_HELPY | similar to GB:U00006 SP:P29680 GB:D12624 PID:409791 GB:U00096 percent identity: 46.59; identified by sequence similarity; putative uroporphyrinogen decarboxylase (hemE) |
| [B] Helicobacter pylori (strain G27) | HELPG00547 | DCUP_HELPG | Uroporphyrinogen decarboxylase |
| [B] Helicobacter pylori (strain HPAG1) | HELPH00585 | DCUP_HELPH | uroporphyrinogen decarboxylase |
| [B] Helicobacter pylori (strain Shi470) | HELPS00733 | DCUP_HELPS | Uroporphyrinogen decarboxylase |
| [B] Helicobacter pylori J99 | HELPJ00547 | DCUP_HELPJ | Uroporphyrinogen decarboxylase |
| [B] Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) | SULDN00631 | DCUP_SULDN | Uroporphyrinogen decarboxylase |
| [B] Wolinella succinogenes | WOLSU00343 | DCUP_WOLSU | UROPORPHYRINOGEN DECARBOXYLASE |
| [B] Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) | NAUPA00537 | DCUP_NAUPA | Uroporphyrinogen decarboxylase |
| [B] Nitratiruptor sp. (strain SB155-2) | NITSB00486 | DCUP_NITSB | Uroporphyrinogen decarboxylase |
| [B] Sulfurovum sp. (strain NBC37-1) | SULNB01610 | DCUP_SULNB | Uroporphyrinogen decarboxylase |
| [B] Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) | ACIF200690 | B7J624 | Uroporphyrinogen decarboxylase |
| [B] Acidithiobacillus ferrooxidans (strain ATCC 53993) | ACIF500834 | B5EP35 | Uroporphyrinogen decarboxylase |
| [B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) | AERHH00748 | A0KGD0 | uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 |
| [B] Aeromonas salmonicida (strain A449) | AERS400692 | DCUP_AERS4 | Uroporphyrinogen decarboxylase |
| [B] Alteromonas macleodii (strain DSM 17117 / Deep ecotype) | ALTMD00634 | B4S1F1 | Uroporphyrinogen decarboxylase |
| [B] Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) | MARAV00783 | DCUP_MARAV | uroporphyrinogen decarboxylase KEGG: hch:HCH_05963 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) | SACD202666 | DCUP_SACD2 | Uroporphyrinogen decarboxylase |
| [B] Colwellia psychrerythraea (strain 34H / ATCC BAA-681) | COLP300407 | DCUP_COLP3 | identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Idiomarina loihiensis | IDILO02277 | DCUP_IDILO | Uroporphyrinogen-III decarboxylase |
| [B] Pseudoalteromonas atlantica (strain T6c / BAA-1087) | PSEA600244 | DCUP_PSEA6 | Uroporphyrinogen decarboxylase |
| [B] Pseudoalteromonas haloplanktis (strain TAC 125) | PSEHT02815 | DCUP_PSEHT | Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8224882, 11524417; Product type e : enzyme uroporphyrinogen decarboxylase |
| [B] Psychromonas ingrahamii (strain 37) | PSYIN03023 | DCUP_PSYIN | uroporphyrinogen decarboxylase KEGG: vfi:VF2402 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) | SHEAM00385 | DCUP_SHEAM | Uroporphyrinogen decarboxylase KEGG: son:SO0435 uroporphyrinogen decarboxylase |
| [B] Shewanella baltica (strain OS155 / ATCC BAA-1091) | SHEB500402 | DCUP_SHEB5 | Uroporphyrinogen decarboxylase |
| [B] Shewanella baltica (strain OS185) | SHEB803845 | DCUP_SHEB8 | Uroporphyrinogen decarboxylase |
| [B] Shewanella baltica (strain OS195) | SHEB903960 | DCUP_SHEB9 | KEGG: shw:Sputw3181_0537 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) uroporphyrinogen decarboxylase |
| [B] Shewanella baltica (strain OS223) | SHEB203735 | DCUP_SHEB2 | Uroporphyrinogen decarboxylase |
| [B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) | SHEDO00457 | DCUP_SHEDO | Uroporphyrinogen decarboxylase |
| [B] Shewanella frigidimarina (strain NCIMB 400) | SHEFN00477 | DCUP_SHEFN | Uroporphyrinogen decarboxylase |
| [B] Shewanella halifaxensis (strain HAW-EB4) | SHEHH00482 | DCUP_SHEHH | Uroporphyrinogen decarboxylase |
| [B] Shewanella loihica (strain BAA-1088 / PV-4) | SHELP03410 | DCUP_SHELP | uroporphyrinogen decarboxylase KEGG: shm:Shewmr7_3590 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Shewanella oneidensis | SHEON00422 | DCUP_SHEON | Uroporphyrinogen decarboxylase |
| [B] Shewanella pealeana (strain ANG-SQ1 / ATCC 700345) | SHEPA00417 | DCUP_SHEPA | KEGG: sdn:Sden_0468 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) uroporphyrinogen decarboxylase |
| [B] Shewanella piezotolerans (strain WP3 / JCM 13877) | SHEPW04483 | DCUP_SHEPW | Uroporphyrinogen decarboxylase |
| [B] Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) | SHEPC03358 | DCUP_SHEPC | Uroporphyrinogen decarboxylase |
| [B] Shewanella sediminis (strain HAW-EB3) | SHESH00440 | DCUP_SHESH | KEGG: sdn:Sden_0468 uroporphyrinogen decarboxylase Uroporphyrinogen decarboxylase |
| [B] Shewanella sp. (strain ANA-3) | SHESA00430 | DCUP_SHESA | uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) KEGG: son:SO0435 uroporphyrinogen decarboxylase |
| [B] Shewanella sp. (strain MR-4) | SHESM00437 | DCUP_SHESM | Uroporphyrinogen decarboxylase |
| [B] Shewanella sp. (strain MR-7) | SHESR03553 | DCUP_SHESR | Uroporphyrinogen decarboxylase |
| [B] Shewanella sp. (strain W3-18-1) | SHESW00524 | DCUP_SHESW | uroporphyrinogen decarboxylase KEGG: son:SO0435 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Shewanella woodyi (strain ATCC 51908 / MS32) | SHEWM00286 | DCUP_SHEWM | Uroporphyrinogen decarboxylase |
| [B] Dichelobacter nodosus (strain VCS1703A) | DICNV01251 | DCUP_DICNV | Uroporphyrinogen decarboxylase |
| [B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) | NITOC02865 | DCUP_NITOC | Uroporphyrinogen decarboxylase HemE |
| [B] Alkalilimnicola ehrlichei (strain MLHE-1) | ALHEH02743 | DCUP_ALHEH | Uroporphyrinogen decarboxylase |
| [B] Halorhodospira halophila (strain DSM 244 / SL1) | HALHL01037 | DCUP_HALHL | Uroporphyrinogen decarboxylase |
| [B] Thioalkalivibrio sp. (strain HL-EbGR7) | THISH02974 | DCUP_THISH | Uroporphyrinogen decarboxylase |
| [B] Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) | CITK802898 | DCUP_CITK8 | Uroporphyrinogen decarboxylase |
| [B] Enterobacter sakazakii (strain ATCC BAA-894) | ENTS803551 | DCUP_ENTS8 | Putative uncharacterized protein |
| [B] Enterobacter sp. (strain 638) | ENT3800209 | DCUP_ENT38 | Uroporphyrinogen decarboxylase |
| [B] Erwinia tasmaniensis (strain DSM 17950 / ET1/99) | ERWT900174 | DCUP_ERWT9 | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli (strain 55989 / EAEC) | ECO5504299 | DCUP_ECO55 | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) | ECOLC03910 | DCUP_ECOLC | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli (strain DH10B) | ECODH03714 | DCUP_ECODH | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli (strain K12) | ECOLI03849 | DCUP_ECOLI | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli (strain SE11) | ECOSE04268 | DCUP_ECOSE | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli (strain SMS-3-5 / SECEC) | ECOSM04240 | DCUP_ECOSM | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli (strain UTI89 / UPEC) | ECOUT03728 | DCUP_ECOUT | uroporphyrinogen decarboxylase |
| [B] Escherichia coli O127:H6 (strain E2348/69 / EPEC) | ECO2704238 | DCUP_ECO27 | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli O139:H28 (strain E24377A / ETEC) | ECO2404275 | DCUP_ECO24 | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli O157:H7 | ECO5704718 | NP_290629.1 | Residues 1 to 354 of 354 are 99.71 pct identical to residues 1 to 354 of 354 from Escherichia coli K-12 Strain MG1655: B3997 uroporphyrinogen decarboxylase |
| [B] Escherichia coli O157:H7 (strain EC4115 / EHEC) | ECO5E04701 | DCUP_ECO5E | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) | ECOLU04382 | DCUP_ECOLU | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli O1:K1 / APEC | ECOK103949 | DCUP_ECOK1 | uroporphyrinogen decarboxylase |
| [B] Escherichia coli O45:K1 (strain S88 / ExPEC) | ECO4504220 | DCUP_ECO45 | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli O6 | ECOL604809 | DCUP_ECOL6 | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli O6:K15:H31 (strain 536) | ECOL504131 | DCUP_ECOL5 | uroporphyrinogen decarboxylase |
| [B] Escherichia coli O7:K1 (strain IAI39 / ExPEC) | ECO7I04167 | DCUP_ECO7I | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli O81 (strain ED1a) | ECO8104449 | DCUP_ECO81 | Uroporphyrinogen decarboxylase |
| [B] Escherichia coli O9:H4 (strain HS) | ECOHS03927 | DCUP_ECOHS | Uroporphyrinogen decarboxylase |
| [B] Klebsiella pneumoniae (strain 342) | KLEP305150 | DCUP_KLEP3 | Uroporphyrinogen decarboxylase |
| [B] Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) | KLEP704295 | DCUP_KLEP7 | Uroporphyrinogen decarboxylase |
| [B] Erwinia carotovora (subsp. atroseptica) | ERWCT00231 | DCUP_ERWCT | Similar to Escherichia coli uroporphyrinogen decarboxylase HemE or b3997 SWALL:DCUP_ECOLI (SWALL:P29680) (354 aa) fasta scores: E(): 1.3e-126, 88.66% id in 353 aa uroporphyrinogen decarboxylase |
| [B] Photorhabdus luminescens (subsp. laumondii) | PHOLL00476 | DCUP_PHOLL | uroporphyrinogen decarboxylase |
| [B] Proteus mirabilis (strain HI4320) | PROMH02747 | DCUP_PROMH | Uroporphyrinogen decarboxylase |
| [B] Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) | SALAR03350 | DCUP_SALAR | Putative uncharacterized protein |
| [B] Salmonella agona (strain SL483) | SALA404075 | DCUP_SALA4 | Uroporphyrinogen decarboxylase |
| [B] Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | SALCH03980 | DCUP_SALCH | IPR000257: Uroporphyrinogen decarboxylase (URO-D) uroporphyrinogen decarboxylase |
| [B] Salmonella dublin (strain CT_02021853) | SALDC04118 | DCUP_SALDC | Uroporphyrinogen decarboxylase |
| [B] Salmonella enteritidis PT4 (strain P125109) | SALEP03916 | DCUP_SALEP | Uroporphyrinogen decarboxylase |
| [B] Salmonella gallinarum (strain 287/91 / NCTC 13346) | SALG203305 | DCUP_SALG2 | Uroporphyrinogen decarboxylase |
| [B] Salmonella heidelberg (strain SL476) | SALHS04162 | DCUP_SALHS | Uroporphyrinogen decarboxylase |
| [B] Salmonella newport (strain SL254) | SALNS04176 | DCUP_SALNS | Uroporphyrinogen decarboxylase |
| [B] Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) | SALPB04952 | DCUP_SALPB | Putative uncharacterized protein |
| [B] Salmonella paratyphi A (strain AKU_12601) | SALPK03876 | DCUP_SALPK | Uroporphyrinogen decarboxylase |
| [B] Salmonella paratyphi-a | SALPA03700 | DCUP_SALPA | similar to Salmonella typhi CT18 uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase |
| [B] Salmonella schwarzengrund (strain CVM19633) | SALSV04043 | DCUP_SALSV | Uroporphyrinogen decarboxylase |
| [B] Salmonella typhi | SALTI03391 | DCUP_SALTI | Uroporphyrinogen decarboxylase |
| [B] Salmonella typhimurium | SALTY03977 | DCUP_SALTY | similar to Escherichia coli uroporphyrinogen decarboxylase (AAC76971.1) uroporphyrinogen decarboxylase |
| [B] Serratia proteamaculans (strain 568) | SERP500287 | DCUP_SERP5 | Uroporphyrinogen decarboxylase |
| [B] Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) | SHIB303488 | DCUP_SHIB3 | Uroporphyrinogen decarboxylase |
| [B] Shigella boydii serotype 4 (strain Sb227) | SHIBS03333 | DCUP_SHIBS | Code: H; COG: COG0407 uroporphyrinogen decarboxylase |
| [B] Shigella dysenteriae serotype 1 (strain Sd197) | SHIDS02918 | DCUP_SHIDS | Code: H; COG: COG0407 uroporphyrinogen decarboxylase |
| [B] Shigella flexneri | SHIFL03678 | DCUP_SHIFL | Residues 1 to 354 of 354 are 99 pct identical to residues 1 to 354 of a 354 aa protein from Escherichia coli K12 ref: NP_418425.1 uroporphyrinogen decarboxylase |
| [B] Shigella flexneri serotype 5b (strain 8401) | SHIF803516 | DCUP_SHIF8 | uroporphyrinogen decarboxylase Code: H; COG: COG0407 |
| [B] Shigella sonnei (strain Ss046) | SHISS03460 | DCUP_SHISS | Code: H; COG: COG0407 uroporphyrinogen decarboxylase |
| [B] Sodalis glossinidius (strain morsitans) | SODGM00131 | DCUP_SODGM | uroporphyrinogen decarboxylase |
| [B] Wigglesworthia glossinidia brevipalpis | WIGBR00508 | DCUP_WIGBR | Biosynthesis of cofactors, prosthetic groups, and carrier |
| [B] Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) | YERE800282 | DCUP_YERE8 | Uroporphyrinogen decarboxylase |
| [B] Yersinia pestis | YERPE03443 | DCUP_YERPE | Uroporphyrinogen decarboxylase |
| [B] Yersinia pestis (biovar Antiqua strain Antiqua) | YERPA03398 | DCUP_YERPA | Uroporphyrinogen decarboxylase |
| [B] Yersinia pestis (biovar Antiqua strain Nepal516) | YERPN00221 | DCUP_YERPN | Uroporphyrinogen decarboxylase |
| [B] Yersinia pestis (strain Pestoides F) | YERPP03533 | DCUP_YERPP | Uroporphyrinogen decarboxylase |
| [B] Yersinia pestis bv. Antiqua (strain Angola) | YERPG00387 | DCUP_YERPG | Uroporphyrinogen decarboxylase |
| [B] Yersinia pseudotuberculosis | YERPS00293 | DCUP_YERPS | Uroporphyrinogen decarboxylase |
| [B] Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758) | YERP303776 | DCUP_YERP3 | Uroporphyrinogen decarboxylase |
| [B] Yersinia pseudotuberculosis serotype IB (strain PB1/+) | YERPB00303 | DCUP_YERPB | Uroporphyrinogen decarboxylase |
| [B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII) | YERPY00343 | DCUP_YERPY | Uroporphyrinogen decarboxylase |
| [B] Coxiella burnetii | COXBU00261 | DCUP_COXBU | identified by match to PFAM protein family HMM PF03610 uroporphyrinogen decarboxylase |
| [B] Coxiella burnetii (strain CbuG_Q212) | COXB201506 | DCUP_COXB2 | Uroporphyrinogen decarboxylase |
| [B] Coxiella burnetii (strain Dugway 5J108-111) | COXBN01695 | DCUP_COXBN | Uroporphyrinogen decarboxylase |
| [B] Coxiella burnetii (strain RSA 331 / Henzerling II) | COXBR00314 | DCUP_COXBR | Uroporphyrinogen decarboxylase |
| [B] Legionella pneumophila (strain Corby) | LEGPC01460 | DCUP_LEGPC | Uroporphyrinogen decarboxylase |
| [B] Legionella pneumophila (strain Lens) | LEGPL01998 | DCUP_LEGPL | Uroporphyrinogen decarboxylase |
| [B] Legionella pneumophila (strain Paris) | LEGPA02001 | DCUP_LEGPA | Uroporphyrinogen decarboxylase |
| [B] Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152) | LEGPH01969 | DCUP_LEGPH | conserved gene uroporphyrinogen decarboxylase |
| [B] Methylococcus capsulatus | METCA00320 | DCUP_METCA | identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) | ALCBS02225 | DCUP_ALCBS | Uroporphyrinogen decarboxylase |
| [B] Hahella chejuensis (strain KCTC 2396) | HAHCH05625 | DCUP_HAHCH | uroporphyrinogen decarboxylase TIGRFAMsMatches:TIGR01464 |
| [B] Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) | CHRSD00115 | DCUP_CHRSD | uroporphyrinogen decarboxylase |
| [B] Marinomonas sp. (strain MWYL1) | MARMS01101 | A6VUC0 | Uroporphyrinogen decarboxylase |
| [B] Actinobacillus pleuropneumoniae serotype 3 (strain JL03) | ACTPJ00111 | DCUP_ACTPJ | Uroporphyrinogen-III decarboxylase |
| [B] Actinobacillus pleuropneumoniae serotype 5b (strain L20) | ACTP200111 | DCUP_ACTP2 | Uroporphyrinogen decarboxylase |
| [B] Actinobacillus pleuropneumoniae serotype 7 (strain AP76) | ACTP700112 | DCUP_ACTP7 | Uroporphyrinogen decarboxylase |
| [B] Actinobacillus succinogenes (strain ATCC 55618 / 130Z) | ACTSZ01945 | DCUP_ACTSZ | Uroporphyrinogen decarboxylase |
| [B] Haemophilus parasuis serovar 5 (strain SH0165) | HAEPS00712 | B8F529 | Uroporphyrinogen-III decarboxylase |
| [B] Haemophilus somnus (strain 129PT) | HAES101536 | DCUP_HAES1 | Uroporphyrinogen decarboxylase |
| [B] Haemophilus somnus (strain 2336) | HAES200550 | DCUP_HAES2 | Uroporphyrinogen decarboxylase |
| [B] Mannheimia succiniciproducens (strain MBEL55E) | MANSM00183 | DCUP_MANSM | Uroporphyrinogen-III decarboxylase HemE protein |
| [B] Pasteurella multocida | PASMU01734 | DCUP_PASMU | Uroporphyrinogen decarboxylase |
| [B] Acinetobacter baumannii (strain AB0057) | ACIB502655 | DCUP_ACIB5 | Uroporphyrinogen decarboxylase |
| [B] Acinetobacter baumannii (strain AB307-0294) | ACIB301037 | DCUP_ACIB3 | Uroporphyrinogen decarboxylase |
| [B] Acinetobacter baumannii (strain ACICU) | ACIBC02559 | DCUP_ACIBC | Uroporphyrinogen-III decarboxylase |
| [B] Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) | ACIBT02288 | ABO12789.1 | Uroporphyrinogen decarboxylase |
| [B] Acinetobacter baumannii (strain AYE) | ACIBY01035 | DCUP_ACIBY | Uroporphyrinogen decarboxylase |
| [B] Acinetobacter baumannii (strain SDF) | ACIBS00976 | DCUP_ACIBS | Uroporphyrinogen decarboxylase |
| [B] Acinetobacter sp. (strain ADP1) | ACIAD02240 | DCUP_ACIAD | Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme uroporphyrinogen decarboxylase |
| [B] Psychrobacter arcticus (strain DSM 17307 / 273-4) | PSYA201481 | DCUP_PSYA2 | Uroporphyrinogen decarboxylase |
| [B] Psychrobacter cryohalolentis (strain K5) | PSYCK01662 | DCUP_PSYCK | uroporphyrinogen decarboxylase |
| [B] Psychrobacter sp. (strain PRwf-1) | PSYWF01533 | DCUP_PSYWF | Uroporphyrinogen decarboxylase |
| [B] Cellvibrio japonicus (strain Ueda107) | CELJU03037 | DCUP_CELJU | Uroporphyrinogen decarboxylase |
| [B] Pseudomonas aeruginosa | PSEAE05021 | DCUP_PSEAE | Uroporphyrinogen decarboxylase |
| [B] Pseudomonas aeruginosa (strain LESB58) | PSEA805396 | DCUP_PSEA8 | Uroporphyrinogen decarboxylase |
| [B] Pseudomonas aeruginosa (strain PA7) | PSEA705654 | DCUP_PSEA7 | Uroporphyrinogen decarboxylase |
| [B] Pseudomonas aeruginosa (strain UCBPP-PA14) | PSEAB05342 | DCUP_PSEAB | uroporphyrinogen decarboxylase |
| [B] Pseudomonas entomophila (strain L48) | PSEE400302 | DCUP_PSEE4 | uroporphyrinogen decarboxylase Evidence 2b : Function of strongly homologous gene; Product type e : enzyme |
| [B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) | PSEF500447 | DCUP_PSEF5 | identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Pseudomonas fluorescens (strain PfO-1) | PSEPF00411 | DCUP_PSEPF | Uroporphyrinogen decarboxylase HemE |
| [B] Pseudomonas mendocina (strain ymp) | PSEMY00539 | DCUP_PSEMY | Uroporphyrinogen decarboxylase |
| [B] Pseudomonas putida (strain F1 / ATCC 700007) | PSEP104883 | DCUP_PSEP1 | Uroporphyrinogen decarboxylase |
| [B] Pseudomonas putida (strain GB-1) | PSEPG05079 | DCUP_PSEPG | uroporphyrinogen decarboxylase unknown EC_number=4.1.1.37 KEGG: pen:PSEEN0339 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Pseudomonas putida (strain KT2440) | PSEPK04964 | DCUP_PSEPK | similar to GB:X65867, GB:S60710, SP:P30566, PID:28904, and PID:28905; identified by sequence similarity; putative uroporphyrinogen decarboxylase |
| [B] Pseudomonas putida (strain W619) | PSEPW00392 | DCUP_PSEPW | Uroporphyrinogen decarboxylase |
| [B] Pseudomonas syringae (pv. tomato) | PSESM04831 | DCUP_PSESM | similar to SP:P29680, GB:L10328, SP:P17112, GB:K00826, GB:X01631, PID:290590, PID:43257, PID:551821, GB:U00096, and PID:2367273; identified by sequence similarity; putative uroporphyrinogen decarboxylase |
| [B] Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) | PSE1400379 | DCUP_PSE14 | identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 uroporphyrinogen decarboxylase |
| [B] Pseudomonas syringae pv. syringae (strain B728a) | PSEU200410 | DCUP_PSEU2 | Uroporphyrinogen decarboxylase HemE |
| [B] Francisella philomiragia subsp. philomiragia (strain ATCC 25017) | FRAP200922 | DCUP_FRAP2 | Uroporphyrinogen decarboxylase |
| [B] Francisella tularensis (subsp. tularensis) | FRATT00045 | DCUP_FRATT | Similar to DCUP_ECOLI (P29680) Uroporphyrinogen decarboxylase from E. coli (354 aa). FASTA: opt: 1106 Z-score: 1322.3 E(): 9.2e-66 Smith-Waterman score: 1106; 47.674 identity in 344 aa overlap uroporphyrinogen decarboxylase |
| [B] Francisella tularensis subsp. holarctica (strain FTA) | FRATF01403 | DCUP_FRATF | Uroporphyrinogen decarboxylase |
| [B] Francisella tularensis subsp. holarctica (strain LVS) | FRATH01717 | DCUP_FRATH | uroporphyrinogen decarboxylase |
| [B] Francisella tularensis subsp. holarctica (strain OSU18) | FRATO01403 | DCUP_FRATO | Uroporphyrinogen decarboxylase |
| [B] Francisella tularensis subsp. mediasiatica (strain FSC147) | FRATM00090 | DCUP_FRATM | Uroporphyrinogen decarboxylase |
| [B] Francisella tularensis subsp. novicida (strain U112) | FRATN01610 | DCUP_FRATN | uroporphyrinogen decarboxylase |
| [B] Francisella tularensis subsp. tularensis (strain WY96-3418) | FRATW00071 | DCUP_FRATW | Uroporphyrinogen decarboxylase |
| [B] Mycobacteriophage FRAT1 | FRAT100045 | DCUP_FRAT1 | uroporphyrinogen decarboxylase Similar to DCUP_ECOLI (P29680) Uroporphyrinogen decarboxylase from E. coli (354 aa). FASTA: opt: 1106 Z-score: 1322.3 E(): 9.2e-66 Smith-Waterman score: 1106; 47.674 identity in 344 aa overlap |
| [B] Thiomicrospira crunogena (strain XCL-2) | THICR00122 | DCUP_THICR | uroporphyrinogen decarboxylase |
| [B] Aliivibrio salmonicida (strain LFI1238) | ALISL02536 | DCUP_ALISL | Uroporphyrinogen decarboxylase |
| [B] Vibrio fischeri (strain MJ11) | VIBFM02421 | DCUP_VIBFM | Uroporphyrinogen decarboxylase |
| [B] Photobacterium profundum | PHOPR03144 | YP_131514.1 | putative uroporphyrinogen decarboxylase |
| [B] Vibrio cholerae | VIBCH00326 | A1F8Z6 | similar to GB:U00006 SP:P29680 GB:D12624 PID:409791 GB:U00096; identified by sequence similarity; putative uroporphyrinogen decarboxylase |
| [B] Vibrio cholerae (strain ATCC 39541 / O395) | VIBC302543 | C3M3Z0 | Uroporphyrinogen decarboxylase |
| [B] Vibrio cholerae serotype O1 (strain M66-2) | VIBCM00306 | C3LR64 | |
| [B] Vibrio fischeri (strain ATCC 700601 / ES114) | VIBF102398 | DCUP_VIBF1 | uroporphyrinogen decarboxylase |
| [B] Vibrio harveyi (strain ATCC BAA-1116 / BB120) | VIBHB00176 | DCUP_VIBHB | Putative uncharacterized protein |
| [B] Vibrio parahaemolyticus | VIBPA02911 | DCUP_VIBPA | similar to GB:AAF93505.1 (AE004122) percent identity 92 in 354 aa uroporphyrinogen decarboxylase |
| [B] Vibrio splendidus (strain LGP32) | VIBSL02778 | B7VM65 | Uroporphyrinogen decarboxylase |
| [B] Vibrio vulnificus | VIBVU01097 | DCUP_VIBVU | COG0407 Uroporphyrinogen-III decarboxylase |
| [B] Vibrio vulnificus (strain YJ016) | VIBVY03120 | DCUP_VIBVY | Uroporphyrinogen decarboxylase |
| [B] Stenotrophomonas maltophilia (strain K279a) | STRMK03393 | B2FQJ0 | Putative uroporphyrinogen decarboxylase |
| [B] Stenotrophomonas maltophilia (strain R551-3) | STRM503020 | B4SSA6 | Uroporphyrinogen decarboxylase |
| [B] Xanthomonas axonopodis (pv. citri) | XANAC02926 | DCUP_XANAC | identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark uroporphyrinogen decarboxylase |
| [B] Xanthomonas campestris pv. campestris | XANCP02763 | DCUP_XANCP | Uroporphyrinogen decarboxylase |
| [B] Xanthomonas campestris pv. campestris (strain 8004) | XANC801214 | DCUP_XANC8 | uroporphyrinogen decarboxylase |
| [B] Xanthomonas campestris pv. campestris (strain B100) | XANCB01310 | DCUP_XANCB | Uroporphyrinogen decarboxylase |
| [B] Xanthomonas campestris pv. vesicatoria (strain 85-10) | XANC503087 | DCUP_XANC5 | uroporphyrinogen decarboxylase |
| [B] Xanthomonas oryzae (pv. oryzae) | XANOR01116 | DCUP_XANOR | identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark uroporphyrinogen decarboxylase |
| [B] Xanthomonas oryzae pv. oryzae (strain MAFF 311018) | XANOM01038 | DCUP_XANOM | Uroporphyrinogen decarboxylase Uroporphyrinogen decarboxylase (URO-D) (UPD) identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker |
| [B] Xanthomonas oryzae pv. oryzae (strain PXO99A) | XANOP03491 | DCUP_XANOP | Uroporphyrinogen decarboxylase |
| [B] Xylella fastidiosa | XYLFA01325 | DCUP_XYLFA | similar to SP|P29680 (percent identity: 54 %/query alignment coverage: 99.7 %/subject alignment coverage: 99.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder uroporphyrinogen decarboxylase |
| [B] Xylella fastidiosa (strain M12) | XYLFM00596 | DCUP_XYLFM | Uroporphyrinogen decarboxylase |
| [B] Xylella fastidiosa (strain M23) | XYLF200576 | DCUP_XYLF2 | Uroporphyrinogen decarboxylase |
| [B] Xylella fastidiosa (strain Temecula1 / ATCC 700964) | XYLFT00536 | DCUP_XYLFT | Uroporphyrinogen decarboxylase |
| [B] Ruthia magnifica subsp. Calyptogena magnifica | RUTMC00927 | DCUP_RUTMC | Uroporphyrinogen decarboxylase |
| [B] Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) | VESOH00889 | DCUP_VESOH | Uroporphyrinogen decarboxylase |
| [B] Magnetococcus sp. (strain MC-1) | MAGSM00024 | DCUP_MAGSM | uroporphyrinogen decarboxylase KEGG: tcx:Tcr_0123 uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase PFAM: Uroporphyrinogen decarboxylase (URO-D) |
| [B] Opitutus terrae (strain DSM 11246 / PB90-1) | OPITP02674 | B1ZV06 | Uroporphyrinogen decarboxylase |