List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 327389

hypothetical protein
This group has 9 members: 9 [B]acteria
Fingerprint: VEFFPTW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Chlamydia muridarumCHLMU00638  UniProtKB/Swiss-Prot AAXB_CHLMU  identified by match to PFAM protein family HMM PF01862 hypothetical protein
[B] Chlamydia trachomatisCHLTR00381  UniProtKB/Swiss-Prot AAXB_CHLTR  hypothetical protein
[B] Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B)CHLTA00390  UniProtKB/Swiss-Prot AAXB_CHLTA  hypothetical protein
[B] Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B)CHLT200624   CHLT2_Chromosome.624  pseudo
[B] Chlamydia trachomatis (strain L2b/UCH-1/proctitis)CHLTB00624   CHLTB_Chromosome.624  pseudo
[B] Chlamydia pneumoniaeCHLPN01442  UniProtKB/Swiss-Prot AAXB_CHLPN  Putative uncharacterized protein
[B] Chlamydophila abortusCHLAB00685  UniProtKB/Swiss-Prot AAXB_CHLAB  Similar to Chlamydophila caviae hypothetical protein cca00730 SWALL:Q822F3 (EMBL:AE016996) (195 aa) fasta scores: E(): 5.6e-79, 96.92% id in 195 aa, and to Chlamydia muridarum hypothetical protein Tc0652 SWALL:Q9PK21 (EMBL:AE002332) (195 aa) fasta scores: E(): 7.4e-75, 91.28% id in 195 aa, and to Chlamydia pneumoniae ct373 hypothetical protein cpn1032 or cpj1032 or cp0820 SWALL:Q9Z6M7 (EMBL:AE001683) (195 aa) fasta scores: E(): 2.7e-73, 89.17% id in 194 aa. Only significant full-length database matches are to Chlamydiaceae proteins. conserved hypothetical protein
[B] Chlamydophila caviaeCHLCV00717  UniProtKB/Swiss-Prot AAXB_CHLCV  similar to GB:M99391, and PID:152478; identified by sequence similarity; putative conserved hypothetical protein
[B] Chlamydophila felis (strain Fe/C-56)CHLFF00286  UniProtKB/Swiss-Prot AAXB_CHLFF  hypothetical protein