List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 225946

N-acetylmuramoyl-L-alanine amidase
This group has 9 members: 9 [B]acteria
Fingerprint: VAGIGKC

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus anthracisBACAN02576  UniProtKB/TrEMBL B0AK39  similar to GP:1865711, and GP:1865711; identified by sequence similarity; putative glycosyl hydrolase, family 25, putative
[B] Bacillus cereus (strain AH187)BACC702677  UniProtKB/TrEMBL B7HUC9  Endolysin
[B] Bacillus cereus (strain ATCC 10987)BACC102815  UniProtKB/TrEMBL Q736Q2  identified by match to protein family HMM PF01183 peptidase, U32 family
[B] Bacillus cereus (strain ATCC 14579 / DSM 31)BACCR02653  UniProtKB/TrEMBL Q81CE8  N-acetylmuramoyl-L-alanine amidase
[B] Bacillus cereus (strain G9842)BACC202692  UniProtKB/TrEMBL B7IJP3  Endolysin
[B] Bacillus cereus (strain ZK)BACCZ02502  UniProtKB/TrEMBL Q63AE6  N-acetylmuramoyl-L-alanine amidase
[B] Bacillus thuringiensis (strain Al Hakam)BACAH02378  UniProtKB/TrEMBL A0RF11  N-acetylmuramoyl-L-alanine amidase
[B] Bacillus thuringiensis (subsp. konkukian)BACHK02513  UniProtKB/TrEMBL Q6HHT7  N-acetylmuramoyl-L-alanine amidase
[B] Alkaliphilus oremlandii (strain OhILAs)ALKOO02393  UniProtKB/TrEMBL A8MJI9  Glycoside hydrolase family 25