List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 394873

epsK domain protein
This group has 5 members: 5 [B]acteria
Fingerprint: TWIPDET

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Dinoroseobacter shibae (strain DFL 12)DINSH00670  UniProtKB/TrEMBL A8LQD8  Glycosyl transferase family 14
[B] Jannaschia sp. (strain CCS1)JANSC01672  UniProtKB/TrEMBL Q28RR7  EpsK domain protein
[B] Paracoccus denitrificans (strain Pd 1222)PARDP01786  UniProtKB/TrEMBL A1B360  glycosyl transferase, family 14 PFAM: glycosyl transferase, family 14 KEGG: sil:SPO3319 EpsK domain protein
[B] Silicibacter pomeroyiSILPO03229  UniProtKB/TrEMBL Q5LN93  identified by similarity to GB:AAC44018.1; match to protein family HMM PF02485 epsK domain protein
[B] Silicibacter sp. (strain TM1040)SILST02478  UniProtKB/TrEMBL Q1GDP6  glycosyl transferase, family 14 PFAM: glycosyl transferase, family 14: (1.1e-05) KEGG: sil:SPO3319 EpsK domain protein, ev=0.0, 75% identity