List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 31960

Tetratricopeptide TPR_2 repeat protein PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG:
This group has 18 members: 18 [B]acteria
Fingerprint: TVLNALW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Trichodesmium erythraeum (strain IMS101)TRIEI04206  UniProtKB/TrEMBL Q10V65  TPR repeat
[B] Caulobacter crescentusCAUCR00118  UniProtKB/TrEMBL Q9ABV1  TPR domain protein
[B] Burkholderia cenocepacia (strain AU 1054)BURCA02832  UniProtKB/TrEMBL Q1BRJ0  Tetratricopeptide TPR_2
[B] Burkholderia cenocepacia (strain HI2424)BURCH00236  UniProtKB/TrEMBL A0K3B5  Tetratricopeptide TPR_2 repeat protein PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: bcn:Bcen_2869 tetratricopeptide TPR_2
[B] Burkholderia cenocepacia (strain MC0-3)BURCC00218  UniProtKB/TrEMBL B1JTG0  TPR repeat-containing protein
[B] Burkholderia cepacia (strain J2315 / LMG 16656)BURCJ00110  UniProtKB/TrEMBL B4EDI5  putative TPR repeat protein
[B] Burkholderia malleiBURMA02397  UniProtKB/TrEMBL Q62FZ1  TPR domain protein
[B] Burkholderia mallei (strain NCTC 10229)BURM901580  UniProtKB/TrEMBL A2S6S9  TPR domain protein
[B] Burkholderia mallei (strain NCTC 10247)BURM702899  UniProtKB/TrEMBL A3MQT2  TPR domain protein
[B] Burkholderia mallei (strain SAVP1)BURMS03225  UniProtKB/TrEMBL A1V926  TPR domain protein
[B] Burkholderia pseudomalleiBURPS03332  UniProtKB/TrEMBL A8EGY7  Similar to Caulobacter crescentus TPR domain protein cc0119 SWALL:Q9ABV1 (EMBL:AE005686) (747 aa) fasta scores: E(): 2.3e-74, 35.09% id in 738 aa, and to Petunia hybrida spindly protein Spy involved in signal transduction SWALL:O82039 (EMBL:Y17720) (932 aa) fasta scores: E(): 4e-50, 28.86% id in 776 aa putative TPR domain protein
[B] Burkholderia pseudomallei (strain 1106a)BURP003865  UniProtKB/TrEMBL A3P0Q4  Tetratricopeptide repeat protein
[B] Burkholderia pseudomallei (strain 1710b)BURP100088  UniProtKB/TrEMBL Q3JY42  TPR domain protein identified by match to protein family HMM PF00515; match to protein family HMM PF07719
[B] Burkholderia pseudomallei (strain 668)BURP603805  UniProtKB/TrEMBL A3NEU6  Tetratricopeptide repeat protein
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA03080  UniProtKB/TrEMBL Q2STP5  TPR domain protein identified by match to protein family HMM PF00515; match to protein family HMM PF07719
[B] Burkholderia xenovorans (strain LB400)BURXL04202  UniProtKB/TrEMBL Q13SV8  Putative TPR domain protein
[B] Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)GEOBB03692  UniProtKB/TrEMBL B5EDV6  Tetratricopeptide TPR_2 repeat protein
[B] Magnetococcus sp. (strain MC-1)MAGSM00286  UniProtKB/TrEMBL A0L4C7  Tetratricopeptide TPR_2 repeat protein PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: bur:Bcep18194_A3340 TPR repeat protein