List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 4295

Alkanal monooxygenase beta chain
This group has 6 members: 6 [B]acteria
Fingerprint: TTHHPVR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Shewanella woodyi (strain ATCC 51908 / MS32)SHEWM03583  UniProtKB/TrEMBL B1KD63  Alkanal monooxygenase
[B] Photorhabdus luminescens (subsp. laumondii)PHOLL02021  UniProtKB/Swiss-Prot LUXB_PHOLL  Alkanal monooxygenase beta chain (luciferase beta subunit)
[B] Aliivibrio salmonicida (strain LFI1238)ALISL03563  UniProtKB/TrEMBL B6ESM4  Alkanal monooxygenase beta chain LuxB
[B] Vibrio fischeri (strain MJ11)VIBFM03614  UniProtKB/TrEMBL B5EV68  Alkanal monooxygenase beta chain
[B] Vibrio fischeri (strain ATCC 700601 / ES114)VIBF103482  UniProtKB/TrEMBL Q5DZ06  LuxB, luciferase beta chain
[B] Vibrio harveyi (strain ATCC BAA-1116 / BB120)VIBHB04646  UniProtKB/TrEMBL A7N6K6  Putative uncharacterized protein