List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 321321

family protein
This group has 5 members: 5 [E]ukaryota
Fingerprint: TKFCICP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Drosophila pseudoobscuraDROPS05753   EAL25174  
[E] Oryza sativaORYSA04349   BAF08041.1  Exostosin-like family protein contains InterPro domain(s): IPR004263 has GO asignment(s): GO:0008151, GO:0016020 supported by AK065525
[E] Sorghum bicolorSORBI09753   4814960  jgi|Sorbi1|4814960|e_gw1.4.1419.1
[E] Populus trichocarpaPOPTR29132  UniProtKB/TrEMBL B9GZ71  jgi|Poptr1_1|711864|estExt_Genewise1_v1.C_LG_III0625 [DNA did not match protein] [DNA partly invalid]
[E] Arabidopsis thalianaARATH20104  UniProtKB/TrEMBL Q9SZK4  exostosin family protein, contains Pfam profile: PF03016 Exostosin family; go_component: membrane [goid GO:0003824@[ISS]; GO:0008150@[ND]; GO:0009507@[IEA]; GO:0016020@[IEA,ISS]] [evidence IEA]; go_component: membrane [goid GO:0003824@[ISS]; GO:0008150@[ND]; GO:0009507@[IEA]; GO:0016020@[IEA,ISS]] [evidence ISS]; go_function: catalytic activity [goid GO:0003824] [evidence ISS]; go_process: biological process unknown [goid GO:0000004] [evidence ND] catalytic