List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 33611
chitinase B
This group has 10 members: 10 [B]acteria
Fingerprint: TITNNEK
| [B] Bacillus clausii (strain KSM-K16) | BACSK00641 | Q5WKC0 | chitinase |
| [B] Bacillus halodurans | BACHD00900 | Q9KED7 | chitinase |
| [B] Bacillus licheniformis (strain DSM 13 / ATCC 14580) | BACLD00299 | Q65NR8 | Glycoside hydrolase, chitinase active site; Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolism (GO:0005975) conserved protein, Glycoside Hydrolase Family 18, YvbX |
| [B] Listeria innocua | LISIN00153 | Q92FF3 | highly similar to chitinase B |
| [B] Listeria monocytogenes | LISMO00105 | C8JSV8 | highly similar to chitinase B |
| [B] Listeria monocytogenes (serotype 4b / strain F2365) | LISMF00121 | Q724V0 | identified by similarity to GP:2696017; match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839 chitinase B |
| [B] Listeria monocytogenes serotype 4a (strain HCC23) | LISMH02487 | B8DGV4 | Chitinase B |
| [B] Listeria monocytogenes serotype 4b (strain Clip81459) | LISMC00111 | C1KXS9 | Putative chitinase B |
| [B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) | LISW600093 | A0AES9 | Complete genome |
| [B] Clostridium botulinum (strain Eklund 17B / type B) | CLOBB03065 | B2TQ75 | Chitinase B |